+D GENES KO
#
KEGG Orthology (KO) - Vibrio cholerae O1 MJ-1236
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:vcj00010]
D VCD_001250 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VCD_001679 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCD_001818 fructose-1,6-bisphosphatase type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VCD_001680 fructose-1,6-bisphosphatase GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VCD_001127 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VCD_001697 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VCD_002367 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VCD_000485 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VCD_001128 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VCD_001288 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VCD_001907 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VCD_001121 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCD_000611 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCD_002359 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCD_000351 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VCD_001941 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VCD_001942 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VCD_001943 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_000798 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D VCD_002334 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCD_002555 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D VCD_001322 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VCD_002782 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VCD_002272 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCD_002366 aldose 1-epimerase-related protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D VCD_001630 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VCD_003066 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VCD_002817 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VCD_003373 PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VCD_002354 PTS system glucose-specific IIB component/PTS system glucose-specific IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:vcj00020]
D VCD_002275 citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D VCD_003805 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VCD_003201 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VCD_002280 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VCD_002281 dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VCD_001943 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_002283 succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VCD_002282 succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VCD_002278 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCD_002279 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCD_002276 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VCD_002277 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VCD_001710 succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCD_001709 succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCD_001708 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VCD_001707 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VCD_003032 fumarate hydratase class I aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VCD_002804 fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VCD_001175 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VCD_001630 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VCD_001941 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VCD_001942 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VCD_000798 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:vcj00030]
D VCD_001250 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VCD_000435 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VCD_000434 6-phosphogluconolactonase eukaryotic type K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D VCD_000433 6-phosphogluconate dehydrogenase decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VCD_001738 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VCD_000697 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VCD_001133 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VCD_000698 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D VCD_001876 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D VCD_001998 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D VCD_000115 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D VCD_002000 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D VCD_002272 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCD_002195 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VCD_001332 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D VCD_001335 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VCD_001333 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D VCD_001127 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VCD_001818 fructose-1,6-bisphosphatase type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VCD_001680 fructose-1,6-bisphosphatase GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VCD_001679 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:vcj00040]
D VCD_000542 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VCD_001228 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VCD_000012 3-keto-L-gulonate 6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D VCD_000013 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D VCD_000010 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D VCD_001738 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:vcj00051]
D VCD_001351 ROK family Glucokinase with ambiguous substrate specificity K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VCD_000666 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VCD_001352 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VCD_002547 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VCD_001375 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VCD_000299 phosphosugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VCD_001376 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VCD_001374 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VCD_001679 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCD_001818 fructose-1,6-bisphosphatase type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VCD_001680 fructose-1,6-bisphosphatase GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VCD_000294 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D VCD_000810 tagatose-6-phosphate kinase/1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D VCD_001127 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VCD_001697 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VCD_002554 phosphotransferase system mannitol/fructose-specific IIA domain protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VCD_002551 PTS system fructose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VCD_000811 PTS system fructose-specific IIB component/PTS system fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VCD_000295 PTS system mannitol-specific IIC component/PTS system mannitol-specific IIB component/PTS system mannitol-specific IIA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:vcj00052]
D VCD_002782 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VCD_002781 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VCD_002780 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VCD_000547 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VCD_001228 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VCD_002272 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCD_002010 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D VCD_002687 hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D VCD_001679 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCD_000667 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:vcj00053]
D VCD_000542 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VCD_000009 PTS system 3-keto-L-gulonate/L-ascorbate specific IIA component (PtxA) K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VCD_000008 PTS system 3-keto-L-gulonate/L-ascorbate specific IIC component (SgaT) K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VCD_000006 hypothetical protein K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D VCD_000012 3-keto-L-gulonate 6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D VCD_000013 L-xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D VCD_000010 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:vcj00500]
D VCD_000669 PTS system sucrose-specific IIB component/PTS system sucrose-specific IIC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D VCD_000667 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D VCD_001228 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VCD_003067 PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VCD_003069 PTS system cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VCD_003068 PTS system cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VCD_003066 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VCD_002817 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VCD_002651 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VCD_000619 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VCD_002652 glycogen synthase ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D VCD_000217 1,4-alpha-glucan (glycogen) branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VCD_000219 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D VCD_001667 type II secretory pathway pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D VCD_000470 periplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VCD_000004 glycosidase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VCD_000218 4-alpha-glucanotransferase (amylomaltase) K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D VCD_003373 PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VCD_000312 glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D VCD_003422 PTS system trehalose-specific IIB component/PTS system trehalose-specific IIC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VCD_003421 trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D VCD_002272 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCD_001250 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VCD_001351 ROK family Glucokinase with ambiguous substrate specificity K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VCD_000666 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:vcj00520]
D VCD_000206 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D VCD_002412 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D VCD_003629 beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D VCD_002121 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VCD_003796 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VCD_003797 chitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D VCD_003373 PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VCD_003343 PTS system N-acetylglucosamine-specific IIB component/PTS system N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VCD_002844 ROK family protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D VCD_002588 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D VCD_003344 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D VCD_000316 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D VCD_003795 glucosamine kinase GpsK K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D VCD_001351 ROK family Glucokinase with ambiguous substrate specificity K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VCD_000666 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D VCD_001119 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VCD_003772 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D VCD_001458 N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D VCD_001409 PTS system N-acetylmuramic acid-specific IIB component/PTS system N-acetylmuramic acid-specific IIC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VCD_003631 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VCD_001410 N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VCD_003630 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D VCD_001844 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VCD_001306 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VCD_002589 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D VCD_002590 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D VCD_002594 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D VCD_003417 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VCD_003416 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VCD_002354 PTS system glucose-specific IIB component/PTS system glucose-specific IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VCD_002272 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCD_001228 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VCD_000542 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VCD_002781 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VCD_002780 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VCD_000547 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VCD_001250 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VCD_001352 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VCD_002547 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VCD_001375 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VCD_000299 phosphosugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VCD_001376 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VCD_001374 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VCD_001373 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D VCD_002651 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VCD_000619 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:vcj00620]
D VCD_001322 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VCD_000798 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D VCD_001941 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VCD_001942 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VCD_001943 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_002496 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VCD_002334 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VCD_003243 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCD_000020 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCD_003244 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VCD_001121 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCD_000611 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCD_002359 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCD_002097 acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VCD_001324 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VCD_001325 biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VCD_003338 acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VCD_002985 acylphosphate phosphohydrolase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCD_002555 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D VCD_000354 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D VCD_000057 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D VCD_000353 hypothetical protein K18930 dld; D-lactate dehydrogenase
D VCD_003328 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VCD_002104 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D VCD_003081 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D VCD_003155 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D VCD_001687 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D VCD_003532 oxaloacetate decarboxylase alpha chain K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VCD_001055 oxaloacetate decarboxylase alpha chain K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VCD_003533 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCD_001054 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCD_003531 oxaloacetate decarboxylase gamma chain K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VCD_001056 oxaloacetate decarboxylase gamma chain K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VCD_001175 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VCD_003032 fumarate hydratase class I aerobic K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VCD_002804 fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VCD_001710 succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCD_001709 succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCD_001708 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VCD_001707 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VCD_001717 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VCD_001630 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VCD_000351 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VCD_003591 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D VCD_000635 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCD_001866 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:vcj00630]
D VCD_003589 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D VCD_001322 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VCD_003591 malate synthase K01638 aceB; malate synthase [EC:2.3.3.9]
D VCD_001175 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VCD_002275 citrate synthase (si) K01647 CS; citrate synthase [EC:2.3.3.1]
D VCD_003805 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VCD_000635 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCD_000634 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D VCD_002792 catalase K03781 katE; catalase [EC:1.11.1.6]
D VCD_001853 hydroxypyruvate reductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VCD_001739 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D VCD_001231 serine--pyruvate aminotransferase/L-alanine:glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VCD_001622 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VCD_000996 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCD_003394 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCD_000998 glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VCD_000994 aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VCD_001943 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_000997 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VCD_000428 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VCD_001335 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VCD_002862 formate dehydrogenase-O major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VCD_002863 formate dehydrogenase-O iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VCD_002864 formate dehydrogenase -O gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D VCD_002376 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:vcj00640]
D VCD_001322 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VCD_002999 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D VCD_003243 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCD_000020 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCD_003244 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VCD_001943 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_002496 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VCD_001494 alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D VCD_001454 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCD_003295 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCD_002097 acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VCD_001324 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VCD_001325 biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VCD_003338 acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VCD_002282 succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VCD_002283 succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VCD_003002 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D VCD_003001 2-methylcitrate dehydratase FeS dependent K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D VCD_003000 hypothetical protein K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D VCD_003805 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VCD_003003 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D VCD_000608 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D VCD_000617 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:vcj00650]
D VCD_000635 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCD_001454 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCD_003295 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCD_002642 short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VCD_000538 uncharacterized paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VCD_002334 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VCD_000637 polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D VCD_000634 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D VCD_003533 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCD_001054 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCD_002278 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCD_002279 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCD_002276 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VCD_002277 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VCD_001710 succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCD_001709 succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCD_001708 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VCD_001707 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VCD_002637 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VCD_002496 pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VCD_000798 pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D VCD_000496 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VCD_001873 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCD_002786 acetolactate synthase catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCD_001499 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCD_001874 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VCD_001498 acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VCD_002785 oxidoreductase short-chain dehydrogenase/reductase family K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:vcj00660]
D VCD_001873 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCD_002786 acetolactate synthase catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCD_001499 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCD_001874 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VCD_001498 acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VCD_002282 succinyl-CoA ligase [ADP-forming] beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VCD_002283 succinyl-CoA ligase [ADP-forming] alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VCD_001864 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VCD_001863 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VCD_001865 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:vcj00562]
D VCD_003581 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VCD_001697 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:vcj00190]
D VCD_002471 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D VCD_002278 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCD_002279 succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCD_002276 succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VCD_002277 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VCD_001710 succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCD_001709 succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCD_001708 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VCD_001707 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VCD_001035 ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D VCD_001034 ubiquinol--cytochrome c reductase cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VCD_001033 ubiquinol cytochrome C oxidoreductase cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D VCD_002904 cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D VCD_002905 cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D VCD_002906 cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D VCD_002907 cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D VCD_002806 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VCD_002532 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VCD_000461 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VCD_002807 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VCD_002533 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VCD_000460 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VCD_002534 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D VCD_001462 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VCD_001460 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VCD_001461 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VCD_001463 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VCD_001459 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VCD_001466 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VCD_001464 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VCD_001465 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VCD_001817 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D VCD_002690 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D VCD_003601 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VCD_003596 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:vcj00680]
D VCD_002862 formate dehydrogenase-O major subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VCD_002863 formate dehydrogenase-O iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VCD_002864 formate dehydrogenase -O gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D VCD_000996 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCD_003394 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCD_001231 serine--pyruvate aminotransferase/L-alanine:glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VCD_001853 hydroxypyruvate reductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VCD_001907 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VCD_001717 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VCD_001175 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VCD_001127 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VCD_001818 fructose-1,6-bisphosphatase type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VCD_001680 fructose-1,6-bisphosphatase GlpX type K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VCD_001679 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCD_002686 trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VCD_002685 cytochrome c-type protein TorY K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VCD_002659 chaperone protein TorD K03533 torD; TorA specific chaperone
D VCD_002413 cytochrome c-type protein TorY K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D VCD_002414 biotin sulfoxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VCD_003243 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCD_000020 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCD_003244 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VCD_001322 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VCD_000351 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VCD_001288 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VCD_000692 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCD_001875 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCD_003184 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VCD_002003 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:vcj00910]
D VCD_000648 periplasmic nitrate reductase precursor K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D VCD_000647 nitrate reductase cytochrome c550-type subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D VCD_002882 NAD-specific glutamate dehydrogenase large K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VCD_001622 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VCD_001975 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VCD_001977 glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VCD_001974 glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VCD_001976 glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VCD_001023 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D VCD_001000 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:vcj00920]
D VCD_001067 sulfate and thiosulfate binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D VCD_000881 sulfate-binding protein sbp K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D VCD_001066 sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D VCD_001065 sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D VCD_001064 sulfate and thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D VCD_001804 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VCD_001803 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VCD_001805 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VCD_001645 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D VCD_001237 phosphoadenylyl-sulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D VCD_001239 sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D VCD_001238 sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D VCD_000701 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VCD_001566 thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D VCD_001715 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCD_003411 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCD_003415 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCD_003281 cysteine synthase B K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VCD_003370 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VCD_002765 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D VCD_001685 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:vcj00061]
D VCD_002097 acetyl-coenzyme A carboxyl transferase alpha chain K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VCD_001324 biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VCD_001325 biotin carboxylase of acetyl-CoA carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VCD_003338 acetyl-coenzyme A carboxyl transferase beta chain K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VCD_001369 acyl carrier protein K02078 acpP; acyl carrier protein
D VCD_002347 acyl carrier protein K02078 acpP; acyl carrier protein
D VCD_002345 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VCD_000569 3-oxoacyl-[acyl-carrier-protein] synthase KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VCD_002344 3-oxoacyl-[acyl-carrier-protein] synthase KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VCD_002260 3-oxoacyl-[acyl-carrier-protein] synthase KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VCD_002348 3-oxoacyl-[acyl-carrier-protein] synthase KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VCD_002346 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VCD_002890 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D VCD_002092 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VCD_002642 short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VCD_000538 uncharacterized paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VCD_001872 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_002383 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_002007 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_001368 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:vcj00071]
D VCD_000635 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCD_001455 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCD_003296 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCD_001454 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCD_003295 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCD_002109 acyl-CoA dehydrogenase short-chain specific K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D VCD_002641 acyl-CoA dehydrogenase short-chain specific K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D VCD_001872 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_002383 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_002007 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_001368 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_002334 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:vcj00561]
D VCD_000428 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCD_000575 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VCD_001560 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VCD_002343 phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D VCD_001082 acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VCD_001845 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VCD_000605 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VCD_000032 lipase precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D VCD_002687 hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:vcj00564]
D VCD_001714 glycerol-3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D VCD_000665 aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D VCD_000572 anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D VCD_000571 anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D VCD_000570 anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D VCD_001560 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VCD_001082 acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VCD_001845 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VCD_000605 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VCD_000627 patatin-related protein K06900 capV; cGAMP-activated phospholipase [EC:3.1.1.32 3.1.1.-]
D VCD_001433 patatin-related protein K06900 capV; cGAMP-activated phospholipase [EC:3.1.1.32 3.1.1.-]
D VCD_001594 lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D VCD_002821 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VCD_000109 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VCD_002086 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D VCD_002427 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D VCD_001308 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D VCD_001285 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D VCD_003129 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D VCD_002077 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D VCD_000199 membrane-associated phospholipid phosphatase K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D VCD_002707 cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:vcj00600]
D VCD_002010 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D VCD_002587 sialidase K23550 nanH; sialidase [EC:3.2.1.18]
D VCD_002687 hypothetical protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D VCD_002121 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VCD_003796 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:vcj00592]
D VCD_000627 patatin-related protein K06900 capV; cGAMP-activated phospholipase [EC:3.1.1.32 3.1.1.-]
D VCD_001433 patatin-related protein K06900 capV; cGAMP-activated phospholipase [EC:3.1.1.32 3.1.1.-]
D VCD_001455 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCD_003296 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:vcj01040]
D VCD_000539 arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D VCD_003279 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D VCD_002677 acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:vcj00230]
D VCD_000556 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VCD_001920 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VCD_001646 ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D VCD_002000 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D VCD_002272 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCD_002195 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VCD_003334 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VCD_001346 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D VCD_002112 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VCD_003120 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D VCD_003460 phosphoribosylformylglycinamidine synthase synthetase subunit/phosphoribosylformylglycinamidine synthase glutamine amidotransferase subunit K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D VCD_002113 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D VCD_001520 phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D VCD_001521 phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D VCD_003153 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D VCD_003216 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VCD_001345 IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VCD_003289 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VCD_000782 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VCD_002204 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VCD_001074 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VCD_003213 inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D VCD_000522 inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D VCD_000184 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VCD_002001 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VCD_000367 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D VCD_003612 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VCD_001024 hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D VCD_003559 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VCD_003570 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VCD_003620 hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D VCD_001151 nucleoside 5-triphosphatase RdgB (dHAPTP dITP XTP-specific) K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D VCD_002065 xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D VCD_003558 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VCD_000053 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D VCD_001659 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D VCD_003095 ribonucleotide reductase of class Ia (aerobic) alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VCD_003096 ribonucleotide reductase of class Ia (aerobic) beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VCD_000816 ribonucleotide reductase of class III (anaerobic) large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D VCD_002388 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D VCD_002389 hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D VCD_001657 GTP pyrophosphokinase (p)ppGpp synthetase II/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D VCD_001317 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VCD_003602 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VCD_001903 GTP pyrophosphokinase (p)ppGpp synthetase I K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D VCD_001582 adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D VCD_001761 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VCD_001617 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D VCD_003433 decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D VCD_001801 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VCD_001939 5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VCD_003352 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VCD_001904 nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VCD_001922 3',5'-cyclic-nucleotide phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D VCD_001165 bis(5'-nucleosyl)-tetraphosphatase symmetrical K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D VCD_001805 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VCD_001804 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VCD_001803 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VCD_000770 gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
C 00240 Pyrimidine metabolism [PATH:vcj00240]
D VCD_001963 carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VCD_001962 carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VCD_001848 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VCD_001847 aspartate carbamoyltransferase regulatory chain PyrI K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D VCD_000407 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D VCD_002883 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D VCD_001405 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D VCD_002451 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D VCD_002083 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D VCD_003570 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VCD_001904 nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VCD_001204 septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D VCD_002761 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D VCD_001906 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D VCD_002446 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D VCD_003304 uridine kinase (C1) K00876 udk; uridine kinase [EC:2.7.1.48]
D VCD_000782 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VCD_002204 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VCD_001074 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VCD_000711 5'-nucleotidase YjjG K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D VCD_000111 N-Ribosylnicotinamide phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D VCD_003308 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D VCD_000367 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D VCD_002114 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D VCD_001801 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VCD_001939 5'-nucleotidase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VCD_003433 decarboxylase family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D VCD_003118 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D VCD_000816 ribonucleotide reductase of class III (anaerobic) large subunit K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D VCD_003095 ribonucleotide reductase of class Ia (aerobic) alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VCD_003096 ribonucleotide reductase of class Ia (aerobic) beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VCD_002389 hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D VCD_000487 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D VCD_002351 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D VCD_001999 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D VCD_003176 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D VCD_003646 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:vcj00250]
D VCD_000814 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCD_001886 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VCD_002373 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VCD_001760 isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VCD_003347 asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VCD_002390 aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VCD_001231 serine--pyruvate aminotransferase/L-alanine:glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VCD_002457 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D VCD_001670 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D VCD_001721 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VCD_001723 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D VCD_001761 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VCD_003216 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VCD_001848 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VCD_001847 aspartate carbamoyltransferase regulatory chain PyrI K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D VCD_002637 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VCD_001975 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VCD_001977 glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VCD_001974 glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VCD_001976 glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VCD_002882 NAD-specific glutamate dehydrogenase large K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VCD_000269 proline dehydrogenase (Proline oxidase)/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VCD_001622 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VCD_001963 carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VCD_001962 carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VCD_001153 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D VCD_001119 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VCD_003334 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:vcj00260]
D VCD_001232 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCD_001058 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCD_000502 aspartokinase associated with ectoin biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCD_001985 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VCD_001684 aspartokinase/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VCD_002262 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCD_002331 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCD_001986 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D VCD_001987 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D VCD_000555 low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D VCD_000996 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCD_003394 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCD_001231 serine--pyruvate aminotransferase/L-alanine:glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VCD_001853 hydroxypyruvate reductase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VCD_000428 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VCD_001288 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VCD_000692 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCD_001875 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCD_003184 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VCD_002003 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D VCD_000447 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VCD_000998 glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VCD_000994 aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VCD_001943 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_000997 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VCD_001308 CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D VCD_003036 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VCD_000658 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VCD_001495 threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VCD_000458 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VCD_003024 alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VCD_003174 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VCD_003173 tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VCD_000500 diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VCD_000499 L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D VCD_000501 L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:vcj00270]
D VCD_001715 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCD_003411 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCD_003415 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCD_003281 cysteine synthase B K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VCD_003370 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VCD_002706 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VCD_001233 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VCD_002674 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VCD_001134 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VCD_001972 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D VCD_003612 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VCD_003058 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VCD_002876 free methionine-(R)-sulfoxide reductase fRMsr K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D VCD_000052 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VCD_001049 S-ribosylhomocysteine lyase/autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VCD_001232 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCD_001058 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCD_000502 aspartokinase associated with ectoin biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCD_001985 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VCD_001684 aspartokinase/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VCD_002262 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCD_002331 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCD_002765 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D VCD_001685 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VCD_001497 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VCD_001050 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D VCD_001138 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D VCD_000814 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCD_000701 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VCD_003024 alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VCD_001175 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VCD_003036 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VCD_000658 L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VCD_001069 cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D VCD_000692 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCD_001875 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCD_003184 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:vcj00280]
D VCD_001497 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VCD_001943 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001454 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCD_003295 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCD_001455 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCD_003296 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCD_000223 2-hydroxy-3-oxopropionate reductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCD_000496 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VCD_000635 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:vcj00290]
D VCD_001495 threonine dehydratase biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VCD_001864 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VCD_001863 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VCD_001865 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D VCD_001873 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCD_002786 acetolactate synthase catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCD_001499 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCD_001874 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VCD_001498 acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VCD_001447 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VCD_001496 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VCD_001497 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VCD_001487 valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D VCD_002390 aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VCD_001866 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:vcj00300]
D VCD_001232 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCD_001058 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCD_000502 aspartokinase associated with ectoin biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCD_001985 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VCD_001684 aspartokinase/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VCD_002262 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCD_002331 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCD_002217 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VCD_001961 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D VCD_002019 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D VCD_001745 acetylornithine aminotransferase/N-succinyl-L,L-diaminopimelate aminotransferase/succinylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VCD_002221 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VCD_001586 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VCD_001585 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VCD_001947 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VCD_001948 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:vcj00310]
D VCD_002281 dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VCD_001943 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001454 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCD_003295 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCD_000635 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCD_003024 alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VCD_001340 lysine decarboxylase K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D VCD_002637 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VCD_000100 hypothetical protein K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D VCD_003146 Fe-S oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:vcj00220]
D VCD_001849 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D VCD_001721 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VCD_001723 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D VCD_001199 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D VCD_001153 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D VCD_001622 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VCD_002882 NAD-specific glutamate dehydrogenase large K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VCD_000814 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCD_002390 aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VCD_002027 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D VCD_000868 acetyltransferase K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D VCD_001720 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D VCD_001719 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D VCD_001745 acetylornithine aminotransferase/N-succinyl-L,L-diaminopimelate aminotransferase/succinylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VCD_001718 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:vcj00330]
D VCD_000509 biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D VCD_000510 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D VCD_000277 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D VCD_002750 hypothetical protein K13746 cansdh; carboxynorspermidine synthase [EC:1.5.1.43]
D VCD_002752 hypothetical protein K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCD_000387 spermidine N1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D VCD_001746 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D VCD_001747 succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D VCD_003107 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D VCD_001147 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D VCD_000269 proline dehydrogenase (Proline oxidase)/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VCD_002068 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VCD_002069 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D VCD_000814 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:vcj00340]
D VCD_003210 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D VCD_003203 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D VCD_003205 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D VCD_003206 imidazole glycerol phosphate synthase amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D VCD_003204 imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D VCD_003207 histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D VCD_003208 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VCD_003209 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D VCD_003142 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D VCD_003141 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D VCD_003139 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D VCD_003140 formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:vcj00350]
D VCD_000814 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCD_003208 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VCD_003058 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VCD_002995 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VCD_002994 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D VCD_002992 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D VCD_002993 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D VCD_002334 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VCD_001698 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D VCD_002637 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:vcj00360]
D VCD_000497 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D VCD_000814 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCD_003208 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VCD_003058 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VCD_002995 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VCD_003540 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D VCD_002815 catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:vcj00380]
D VCD_002281 dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VCD_001943 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001454 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCD_003295 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCD_000635 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCD_000086 tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCD_002792 catalase K03781 katE; catalase [EC:1.11.1.6]
D VCD_002815 catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:vcj00400]
D VCD_002868 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VCD_000304 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VCD_003626 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VCD_001735 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D VCD_001323 3-dehydroquinate dehydratase II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D VCD_001524 shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D VCD_001734 shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D VCD_002647 5-Enolpyruvylshikimate-3-phosphate synthase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D VCD_002254 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D VCD_003169 anthranilate synthase aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VCD_003170 anthranilate synthase amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VCD_003171 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D VCD_003172 indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D VCD_003174 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VCD_003173 tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VCD_003625 chorismate mutase I/cyclohexadienyl dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D VCD_003617 chorismate mutase I/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D VCD_000814 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCD_003208 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VCD_003058 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VCD_000497 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:vcj00410]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VCD_001019 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VCD_001454 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCD_003295 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00430 Taurine and hypotaurine metabolism [PATH:vcj00430]
D VCD_001421 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VCD_002457 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D VCD_002882 NAD-specific glutamate dehydrogenase large K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VCD_003244 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VCD_003243 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VCD_000020 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:vcj00440]
D VCD_000713 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D VCD_000715 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D VCD_000902 toxin resistance protein K03823 pat; phosphinothricin acetyltransferase [EC:2.3.1.183]
C 00450 Selenocompound metabolism [PATH:vcj00450]
D VCD_001685 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VCD_002706 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VCD_001233 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VCD_002674 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VCD_003161 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D VCD_001804 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VCD_001803 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VCD_003306 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:vcj00460]
D VCD_001421 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VCD_002373 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VCD_001760 isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VCD_000996 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCD_003394 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:vcj00470]
D VCD_001252 alanine racemase biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D VCD_000746 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VCD_003024 alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VCD_001153 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D VCD_001614 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D VCD_001950 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VCD_000458 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VCD_001586 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VCD_001585 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VCD_003540 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:vcj00480]
D VCD_001421 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VCD_000546 lactam utilization protein LAMB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D VCD_000544 allophanate hydrolase subunit 2 K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D VCD_001050 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D VCD_001138 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D VCD_001856 cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VCD_003571 peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D VCD_002880 membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D VCD_002062 aminoacyl-histidine dipeptidase (Peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VCD_001427 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D VCD_003201 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VCD_000433 6-phosphogluconate dehydrogenase decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VCD_000435 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VCD_001726 peroxiredoxin family protein/glutaredoxin K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D VCD_002989 hypothetical protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D VCD_000277 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:vcj00511]
D VCD_002587 sialidase K23550 nanH; sialidase [EC:3.2.1.18]
D VCD_002010 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D VCD_002121 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VCD_003796 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00540 Lipopolysaccharide biosynthesis [PATH:vcj00540]
D VCD_002093 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VCD_001957 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VCD_002091 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VCD_002526 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VCD_002094 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VCD_002485 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VCD_001836 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VCD_002203 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VCD_001835 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D VCD_002487 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VCD_001384 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VCD_001403 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VCD_001404 lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D VCD_002495 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D VCD_000241 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VCD_001390 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D VCD_002110 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D VCD_001918 ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D VCD_003424 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D VCD_001377 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D VCD_001381 hypothetical protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D VCD_001380 O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:vcj00541]
D VCD_001228 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VCD_000547 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VCD_000542 UDP-glucose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VCD_001352 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VCD_002547 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VCD_001375 phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VCD_000299 phosphosugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VCD_001376 mannose-1-phosphate guanylyltransferase (GDP) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D VCD_001374 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D VCD_001373 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D VCD_001458 N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D VCD_003417 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VCD_003416 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VCD_001361 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D VCD_001360 UDP-glucose 4-epimerase K24310 wbpV; UDP-N-acetyl-alpha-D-quinovosamine dehydrogenase [EC:1.1.1.426]
C 00550 Peptidoglycan biosynthesis [PATH:vcj00550]
D VCD_001844 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VCD_001306 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VCD_001953 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D VCD_001950 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VCD_001947 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VCD_000746 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VCD_001948 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D VCD_002085 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VCD_001079 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VCD_001868 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VCD_001949 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VCD_001952 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D VCD_001728 multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VCD_003807 multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VCD_003386 penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VCD_001946 cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VCD_001003 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VCD_003389 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VCD_003779 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:vcj00552]
D VCD_001079 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VCD_001868 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VCD_001361 nucleoside-diphosphate sugar epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:vcj00543]
D VCD_003401 Capsular polysaccharide synthesis enzyme CpsA sugar transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D VCD_003414 hypothetical protein K20921 vpsD; polysaccharide biosynthesis protein VpsD
D VCD_003409 hypothetical protein K20922 vpsI; polysaccharide biosynthesis protein VpsI
D VCD_003407 N-acetylmannosaminyltransferase K25886 vpsK; polysaccharide biosynthesis protein VpsK
D VCD_001715 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCD_003411 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCD_003415 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:vcj00730]
D VCD_001529 thiamin biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D VCD_003055 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D VCD_001531 sulfur carrier protein adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D VCD_003578 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VCD_003437 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VCD_001534 thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D VCD_003443 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VCD_001533 thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D VCD_002076 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D VCD_001283 ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VCD_003352 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:vcj00740]
D VCD_003088 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VCD_002073 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D VCD_002071 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VCD_001589 2-haloalkanoic acid dehalogenase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D VCD_000280 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D VCD_002074 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D VCD_002072 riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D VCD_003639 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D VCD_001310 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D VCD_003609 NADPH-flavin oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D VCD_000556 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VCD_001920 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VCD_001820 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:vcj00750]
D VCD_000263 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D VCD_001129 D-erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D VCD_002261 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D VCD_003184 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VCD_001162 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D VCD_001896 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D VCD_001987 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:vcj00760]
D VCD_001886 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VCD_002543 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D VCD_001933 quinolinate phosphoribosyltransferase (decarboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D VCD_000146 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D VCD_000184 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VCD_002001 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VCD_000782 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VCD_002204 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VCD_001074 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VCD_000044 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D VCD_001904 nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VCD_001293 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D VCD_000045 NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D VCD_001063 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D VCD_000607 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D VCD_002866 NAD-dependent protein deacetylase of SIR2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D VCD_003475 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D VCD_001608 soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D VCD_000765 NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D VCD_000764 NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D VCD_002637 succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:vcj00770]
D VCD_001873 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCD_002786 acetolactate synthase catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCD_001499 acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VCD_001874 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VCD_001498 acetolactate synthase small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VCD_001447 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VCD_001496 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VCD_001018 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D VCD_002036 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D VCD_001019 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VCD_001304 pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D VCD_001401 phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D VCD_001904 nucleoside triphosphate pyrophosphohydrolase MazG K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VCD_001394 phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D VCD_001928 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D VCD_001897 holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D VCD_000551 acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D VCD_001497 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VCD_003193 glutamate decarboxylase eukaryotic type K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:vcj00780]
D VCD_003228 biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D VCD_002260 3-oxoacyl-[acyl-carrier-protein] synthase KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VCD_002348 3-oxoacyl-[acyl-carrier-protein] synthase KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VCD_002346 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VCD_002092 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VCD_001649 biotin synthesis protein BioH K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D VCD_003229 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VCD_003231 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VCD_003227 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D VCD_003230 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D VCD_001305 biotin-protein ligase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:vcj00785]
D VCD_003391 octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D VCD_003392 lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D VCD_002957 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D VCD_001943 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001941 pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VCD_001942 dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VCD_002280 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VCD_002281 dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VCD_000998 glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VCD_000994 aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VCD_000997 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:vcj00790]
D VCD_000705 GTP cyclohydrolase I type 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D VCD_001081 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D VCD_001080 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D VCD_003814 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D VCD_003773 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D VCD_003741 hypothetical protein K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D VCD_003730 dihydropteroate synthase K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D VCD_001166 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VCD_003671 dihydrofolate reductase K18589 dfrA1; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3]
D VCD_003337 dihydrofolate synthase/folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D VCD_003088 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VCD_002073 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D VCD_001744 para-aminobenzoate synthase amidotransferase component K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D VCD_003033 para-aminobenzoate synthase aminase component K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D VCD_002349 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D VCD_003037 queuosine biosynthesis QueD PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VCD_000498 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D VCD_000497 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D VCD_002976 queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VCD_002975 queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VCD_003430 NADPH dependent preQ0 reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VCD_003316 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VCD_003314 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VCD_003312 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VCD_003315 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VCD_002848 molybdopterin-guanine dinucleotide biosynthesis protein B K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D VCD_000704 molybdopterin biosynthesis protein A K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D VCD_002849 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:vcj00670]
D VCD_001166 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VCD_003671 dihydrofolate reductase K18589 dfrA1; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3]
D VCD_000707 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D VCD_002420 methylenetetrahydrofolate dehydrogenase (NADP+)/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D VCD_000996 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCD_003394 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VCD_002112 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VCD_001345 IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VCD_001514 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VCD_000994 aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VCD_001233 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VCD_003646 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D VCD_002376 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D VCD_001682 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D VCD_001877 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:vcj00860]
D VCD_002124 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VCD_002198 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D VCD_003785 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VCD_001568 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VCD_001580 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D VCD_001579 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D VCD_001292 uroporphyrinogen III decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D VCD_001523 coproporphyrinogen III oxidase aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D VCD_001576 coproporphyrinogen III oxidase oxygen-independent K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D VCD_001451 protoporphyrinogen IX oxidase oxygen-independent HemG K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D VCD_003351 ferrochelatase protoheme ferro-lyase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D VCD_001578 HemX-like protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VCD_001802 uroporphyrinogen-III methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VCD_002978 siroheme synthase/precorrin-2 oxidase/sirohydrochlorin ferrochelatase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D VCD_003682 ATPase associated with various cellular activities AAA_5 K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D VCD_003302 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D VCD_000592 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D VCD_001971 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D VCD_003109 adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D VCD_003110 cobalamin synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D VCD_003111 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D VCD_003108 alpha-ribazole-5'-phosphate phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D VCD_000424 hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D VCD_001259 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:vcj00130]
D VCD_001562 chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D VCD_001561 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D VCD_001312 3-polyprenyl-4-hydroxybenzoate carboxy-lyase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D VCD_001820 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VCD_001881 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D VCD_003094 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D VCD_001880 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D VCD_001550 ubiquinone/menaquinone biosynthesis methyltransferase UbiE/COQ5 K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D VCD_003374 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D VCD_002391 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D VCD_003553 isochorismate synthase of siderophore biosynthesis K02361 entC; isochorismate synthase [EC:5.4.4.2]
D VCD_002392 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D VCD_002393 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D VCD_002395 O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D VCD_002396 O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D VCD_002394 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D VCD_000738 uncharacterized protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D VCD_001694 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D VCD_002209 Trp repressor-binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D VCD_002995 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:vcj00900]
D VCD_003443 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VCD_002087 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D VCD_001077 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D VCD_002196 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D VCD_001076 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D VCD_003567 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D VCD_003635 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D VCD_000635 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCD_000596 hydroxymethylglutaryl-CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D VCD_001820 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VCD_003442 octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferase/geranylgeranyl pyrophosphate synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D VCD_001172 octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferase/geranylgeranyl pyrophosphate synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VCD_002085 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:vcj00907]
D VCD_001454 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCD_003295 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCD_001455 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCD_003296 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D VCD_000697 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VCD_001133 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:vcj01053]
D VCD_002391 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D VCD_003553 isochorismate synthase of siderophore biosynthesis K02361 entC; isochorismate synthase [EC:5.4.4.2]
D VCD_003555 isochorismatase of siderophore biosynthesis K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D VCD_003552 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D VCD_003545 phosphopantetheinyl transferase component of siderophore synthetase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D VCD_003554 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D VCD_002798 enterobactin synthetase component F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D VCD_003551 amide synthase component of siderophore synthetase K04778 vibH; vibriobactin synthetase
D VCD_002129 non-ribosomal peptide synthetase modules siderophore biosynthesis K12237 vibF; nonribosomal peptide synthetase VibF
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:vcj00332]
D VCD_002068 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VCD_002069 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:vcj00261]
D VCD_001804 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VCD_001803 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VCD_001232 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCD_001058 aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCD_000502 aspartokinase associated with ectoin biosynthesis K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VCD_001985 aspartokinase/homoserine dehydrogenase K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VCD_001684 aspartokinase/homoserine dehydrogenase K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VCD_002262 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCD_002331 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VCD_002217 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VCD_001961 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:vcj00521]
D VCD_002272 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VCD_003581 myo-inositol-1(or 4)-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:vcj00401]
D VCD_003625 chorismate mutase I/cyclohexadienyl dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D VCD_000814 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCD_003208 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VCD_003058 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D VCD_003169 anthranilate synthase aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VCD_003170 anthranilate synthase amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D VCD_002345 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VCD_002346 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D VCD_001369 acyl carrier protein K02078 acpP; acyl carrier protein
D VCD_002347 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:vcj00999]
D VCD_001134 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VCD_001524 shikimate 5-dehydrogenase I alpha K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
D VCD_002418 PvcB protein K22874 pvcB; L-tyrosine isonitrile desaturase/decarboxylase [EC:1.14.20.9 1.14.20.10]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:vcj00362]
D VCD_001455 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCD_003296 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCD_003295 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VCD_001454 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCD_003533 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCD_001054 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCD_000635 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:vcj00627]
D VCD_002985 acylphosphate phosphohydrolase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VCD_001820 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:vcj00625]
D VCD_002334 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VCD_003508 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:vcj00633]
D VCD_000685 oxygen-insensitive NAD(P)H nitroreductase/dihydropteridine reductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D VCD_000345 2,4-dienoyl-CoA reductase (NADPH) K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D VCD_000340 NADH-dependent flavin oxidoreductase Oye family K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D VCD_001455 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VCD_003296 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:vcj00643]
D VCD_002994 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D VCD_002992 maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D VCD_002993 2-keto-4-pentenoate hydratase K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:vcj00930]
D VCD_001454 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VCD_003295 enoyl-CoA hydratase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:vcj00626]
D VCD_002334 alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:vcj03020]
D VCD_001296 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VCD_001295 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VCD_001792 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VCD_001658 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:vcj03010]
D VCD_002447 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D VCD_002081 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D VCD_001773 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D VCD_001791 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D VCD_001784 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D VCD_001258 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D VCD_001263 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D VCD_001781 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D VCD_001036 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D VCD_001766 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D VCD_001790 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D VCD_001264 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D VCD_001789 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D VCD_001780 SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D VCD_003765 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D VCD_001045 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D VCD_001776 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D VCD_001256 SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D VCD_001771 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D VCD_003641 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D VCD_001085 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D VCD_001299 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D VCD_001770 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D VCD_001767 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D VCD_001768 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D VCD_001779 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D VCD_001782 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D VCD_001297 LSU ribosomal protein L7/L12 (L23e) K02935 RP-L7; large subunit ribosomal protein L7/L12
D VCD_001255 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D VCD_001298 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D VCD_001300 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D VCD_001037 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D VCD_001777 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D VCD_001786 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D VCD_001774 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D VCD_001793 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D VCD_001783 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D VCD_001042 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D VCD_000985 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D VCD_001171 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D VCD_001772 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D VCD_001769 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D VCD_001778 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D VCD_002735 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D VCD_001170 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D VCD_001398 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D VCD_001775 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D VCD_001785 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D VCD_001688 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D VCD_003453 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D VCD_002342 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D VCD_001397 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D VCD_001476 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D VCD_000986 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D VCD_001788 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D VCD_003452 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D VCD_rna059 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna066 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna029 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna118 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna075 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna047 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna116 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna071 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna062 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna078 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna055 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna044 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna063 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna054 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna043 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna079 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna072 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna115 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna081 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:vcj00970]
D VCD_rna061 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCD_rna045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCD_rna070 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCD_rna077 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCD_rna101 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna052 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna006 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna008 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna011 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna109 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCD_rna020 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCD_rna022 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCD_rna017 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCD_rna042 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCD_rna114 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCD_rna064 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCD_rna073 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCD_rna023 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCD_rna001 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VCD_rna003 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VCD_rna108 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VCD_rna084 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCD_rna092 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCD_rna095 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCD_rna086 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCD_rna090 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCD_rna028 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCD_rna117 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCD_rna058 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCD_rna067 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCD_rna004 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna039 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna033 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna105 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna037 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna036 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna107 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna049 tRNA-His K14226 tRNA-His; tRNA His
D VCD_rna051 tRNA-His K14226 tRNA-His; tRNA His
D VCD_rna046 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VCD_rna076 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VCD_rna074 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna083 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna091 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna089 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna096 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna087 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna093 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna097 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna002 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna106 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna120 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna027 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VCD_rna068 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VCD_rna057 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VCD_rna088 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna098 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna094 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna013 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna030 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna031 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna032 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna034 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna119 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna014 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VCD_rna018 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VCD_rna016 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VCD_rna048 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCD_rna050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCD_rna082 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCD_rna100 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCD_rna053 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCD_rna099 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCD_rna012 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCD_rna010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCD_rna102 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCD_rna080 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCD_rna038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCD_rna019 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCD_rna021 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCD_rna041 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCD_rna015 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCD_rna065 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VCD_rna040 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCD_rna112 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCD_rna113 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCD_rna110 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCD_rna111 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCD_rna026 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCD_rna056 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCD_rna069 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCD_rna103 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCD_rna104 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCD_002124 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VCD_003341 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VCD_001060 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VCD_003562 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VCD_003177 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VCD_003054 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VCD_001489 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VCD_001488 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VCD_000988 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VCD_003232 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VCD_002528 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VCD_003306 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VCD_001514 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VCD_001854 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VCD_003381 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VCD_003638 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VCD_003655 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VCD_002293 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VCD_003455 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VCD_003566 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VCD_003126 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VCD_003125 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VCD_003780 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCD_001141 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCD_001740 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:vcj03060]
D VCD_001787 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D VCD_001302 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VCD_003771 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VCD_003583 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VCD_000632 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VCD_003582 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VCD_000633 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VCD_003584 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VCD_001474 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VCD_001959 protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VCD_001713 chaperone protein SecB K03071 secB; preprotein translocase subunit SecB
D VCD_001046 signal recognition particle subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VCD_001604 signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VCD_000795 twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VCD_001553 twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VCD_001554 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D VCD_001555 twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D VCD_001892 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D VCD_003637 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:vcj04122]
D VCD_003578 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VCD_000701 rhodanese-related sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VCD_001492 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VCD_002212 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VCD_001265 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D VCD_001266 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D VCD_001267 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D VCD_002984 tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D VCD_003214 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VCD_003312 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VCD_003316 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VCD_003313 molybdenum cofactor biosynthesis protein D K03636 moaD; sulfur-carrier protein
D VCD_000703 molybdopterin biosynthesis protein B K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D VCD_003314 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VCD_003315 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VCD_003437 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VCD_001532 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein
D VCD_001531 sulfur carrier protein adenylyltransferase ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:vcj03018]
D VCD_003650 adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D VCD_002337 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VCD_001316 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D VCD_001907 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VCD_003764 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VCD_000047 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VCD_000552 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VCD_002939 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VCD_001764 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VCD_000519 cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VCD_001419 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VCD_001314 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VCD_001679 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCD_003472 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VCD_001703 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCD_000504 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCD_001276 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VCD_003601 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VCD_003596 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VCD_003813 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:vcj03030]
D VCD_003060 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_003725 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_001321 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_002107 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_002096 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VCD_003288 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VCD_002352 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VCD_003383 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VCD_003755 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VCD_001855 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VCD_001481 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VCD_001253 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VCD_001087 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VCD_003686 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VCD_001226 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VCD_001109 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VCD_002106 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VCD_002095 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D VCD_001570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VCD_003367 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:vcj03410]
D VCD_003327 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VCD_001990 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D VCD_001155 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VCD_001395 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VCD_000322 3-methyladenine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VCD_002705 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D VCD_002502 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D VCD_001989 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VCD_001570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VCD_001938 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VCD_003367 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:vcj03420]
D VCD_002475 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VCD_001229 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D VCD_003320 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D VCD_003130 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D VCD_001424 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VCD_001570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VCD_003367 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:vcj03430]
D VCD_001070 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VCD_001278 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D VCD_003651 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D VCD_001424 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VCD_003115 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D VCD_003560 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VCD_003441 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VCD_001938 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VCD_003686 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VCD_001226 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VCD_002096 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VCD_001481 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VCD_003288 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VCD_003383 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VCD_002352 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VCD_003060 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_003725 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_001321 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_002107 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_001855 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VCD_003755 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VCD_003367 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VCD_001737 methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:vcj03440]
D VCD_001938 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VCD_003686 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VCD_001226 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VCD_001482 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D VCD_001895 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VCD_003286 recombination protein RecR K06187 recR; recombination protein RecR
D VCD_001062 RecA protein K03553 recA; recombination protein RecA
D VCD_001570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VCD_002530 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VCD_002531 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VCD_002529 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VCD_001656 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VCD_002024 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D VCD_002023 exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D VCD_002025 exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VCD_002096 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VCD_001481 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VCD_003288 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VCD_003383 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VCD_002352 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VCD_003060 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_003725 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_001321 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_002107 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_001855 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VCD_003755 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VCD_001689 helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VCD_001257 primosomal replication protein N K02686 priB; primosomal replication protein N
D VCD_002519 primosomal replication protein N prime prime K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:vcj03250]
D VCD_002042 peptidyl-prolyl cis-trans isomerase PpiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:vcj02010]
D VCD_001067 sulfate and thiosulfate binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D VCD_000881 sulfate-binding protein sbp K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D VCD_001066 sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D VCD_001065 sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D VCD_001064 sulfate and thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D VCD_002852 ABC-type tungstate transport system binding protein K05772 tupA; tungstate transport system substrate-binding protein
D VCD_002851 ABC-type tungstate transport system permease protein K05773 tupB; tungstate transport system permease protein
D VCD_002850 ABC-type tungstate transport system ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D VCD_000593 molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D VCD_000594 molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D VCD_000595 molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VCD_003801 ferric iron ABC transporter iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VCD_000716 ABC transporter of unknown compound (not Fe3+) substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VCD_000640 ABC transporter of unknown compound (not Fe3+) substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VCD_003800 iron(III) ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein
D VCD_000718 ABC transporter of unknown compound (not Fe3+) permease protein K02011 afuB; iron(III) transport system permease protein
D VCD_000639 ABC transporter of unknown compound (not Fe3+) permease protein K02011 afuB; iron(III) transport system permease protein
D VCD_000638 ABC transporter of unknown compound (not Fe3+) ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VCD_003799 ferric iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VCD_000717 ABC transporter of unknown compound (not Fe3+) ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VCD_001821 thiamin ABC transporter substrate-binding component K02064 thiB; thiamine transport system substrate-binding protein
D VCD_001822 thiamin ABC transporter transmembrane component K02063 thiP; thiamine transport system permease protein
D VCD_001823 thiamin ABC transporter ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D VCD_002921 ABC transporter periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCD_002922 putrescine ABC transporter putrescine-binding protein PotF K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCD_003618 hypothetical protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCD_000231 ABC transporter periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCD_002920 spermidine putrescine ABC transporter permease component PotC K11070 potC; spermidine/putrescine transport system permease protein
D VCD_002919 spermidine putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D VCD_002918 spermidine putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D VCD_000389 maltose/maltodextrin ABC transporter substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VCD_000390 maltose/maltodextrin ABC transporter permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D VCD_000391 maltose/maltodextrin ABC transporter permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D VCD_000388 maltose/maltodextrin transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VCD_000307 N-Acetyl-D-glucosamine ABC transport system sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D VCD_001841 uncharacterized ABC transporter auxiliary component YrbC K07323 mlaC; phospholipid transport system substrate-binding protein
D VCD_001840 uncharacterized ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VCD_001839 uncharacterized ABC transporter permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VCD_001842 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D VCD_001838 uncharacterized ABC transporter ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VCD_000116 ribose ABC transport system ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D VCD_000117 ribose ABC transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D VCD_000118 ribose ABC transport system ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VCD_000119 ribose ABC transport system high affinity permease RbsD K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D VCD_003012 galactose/methyl galactoside ABC transport system D-galactose-binding MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D VCD_003010 galactose/methyl galactoside ABC transport system permease protein MglC K10541 mglC; methyl-galactoside transport system permease protein
D VCD_003011 galactose/methyl galactoside ABC transport system ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D VCD_002826 glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D VCD_002825 SN-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D VCD_002824 SN-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D VCD_002823 SN-glycerol-3-phosphate transport ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D VCD_000170 phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VCD_003603 phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VCD_000516 ABC-type phosphate transport system periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D VCD_000169 phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VCD_003600 phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VCD_000168 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VCD_003599 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VCD_000167 phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VCD_003598 phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VCD_000561 arginine ABC transporter periplasmic arginine-binding protein ArtI K09997 artI; arginine transport system substrate-binding protein
D VCD_000563 arginine ABC transporter permease protein ArtM K09998 artM; arginine transport system permease protein
D VCD_000562 arginine ABC transporter permease protein ArtQ K09999 artQ; arginine transport system permease protein
D VCD_000560 arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D VCD_002979 amino acid ABC transporter amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D VCD_002980 amino acid ABC transporter permease protein K09970 aapQ; general L-amino acid transport system permease protein
D VCD_002981 amino acid ABC transporter permease protein K09971 aapM; general L-amino acid transport system permease protein
D VCD_002982 ABC-type polar amino acid transport system ATPase component K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VCD_001479 amino acid ABC transporter amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D VCD_001478 amino acid ABC transporter permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D VCD_001477 ABC-type polar amino acid transport system ATPase component K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D VCD_002499 amino acid ABC transporter amino acid-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D VCD_002501 amino acid ABC transporter permease protein K10023 aotM; arginine/ornithine transport system permease protein
D VCD_002500 arginine/ornithine ABC transporter permease protein AotQ K10024 aotQ; arginine/ornithine transport system permease protein
D VCD_002498 arginine/ornithine ABC transporter ATP-binding protein AotP K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D VCD_003427 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D VCD_003426 methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D VCD_003425 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D VCD_003250 oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VCD_003249 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VCD_003248 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VCD_003247 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VCD_000361 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VCD_003246 oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VCD_002697 peptide transport periplasmic protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D VCD_002696 peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D VCD_002695 peptide transport system permease protein SapC K19228 sapC; cationic peptide transport system permease protein
D VCD_002694 peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D VCD_002693 peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D VCD_000726 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein
D VCD_000727 oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D VCD_000728 oligopeptide transport system permease protein OppC K13895 yejE; microcin C transport system permease protein
D VCD_000729 hypothetical protein K13896 yejF; microcin C transport system ATP-binding protein
D VCD_003550 ferric vibriobactin enterobactin transport system substrate-binding protein ViuP K23185 fepB; ferric enterobactin transport system substrate-binding protein
D VCD_003549 ferric vibriobactin enterobactin transport system permease protein ViuD K23186 fepD; iron-siderophore transport system permease protein
D VCD_003548 ferric vibriobactin enterobactin transport system permease protein ViuG K23187 fepG; iron-siderophore transport system permease protein
D VCD_003546 ferric vibriobactin enterobactin transport system ATP-binding protein ViuC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D VCD_001413 ferrichrome-binding periplasmic protein precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D VCD_001412 ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D VCD_001414 ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D VCD_001970 vitamin B12 ABC transporter B12-binding component BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D VCD_003106 vitamin B12 ABC transporter permease component BtuC K06073 btuC; vitamin B12 transport system permease protein
D VCD_003105 vitamin B12 ABC transporter ATPase component BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D VCD_002286 zinc ABC transporter-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D VCD_002284 hypothetical protein K09816 znuB; zinc transport system permease protein
D VCD_002285 zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VCD_001371 O-antigen export system permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D VCD_001370 O-antigen export system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D VCD_002477 lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D VCD_002479 lipoprotein releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D VCD_002478 lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VCD_002312 cytochrome c-type biogenesis protein CcmD interacts with CcmCE K02196 ccmD; heme exporter protein D
D VCD_002311 cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D VCD_002310 ABC transporter involved in cytochrome c biogenesis CcmB subunit K02194 ccmB; heme exporter protein B
D VCD_002309 ABC transporter involved in cytochrome c biogenesis ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D VCD_001857 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D VCD_001858 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D VCD_001832 lipopolysaccharide ABC transporter ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VCD_001606 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VCD_001605 cell division transporter ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VCD_002483 lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VCD_000342 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VCD_001416 hypothetical protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VCD_000259 ABC transporter transmembrane region K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VCD_003163 transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D VCD_003162 transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS) [PATH:vcj02060]
D VCD_003372 phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VCD_003371 phosphocarrier protein of PTS system K02784 ptsH; phosphocarrier protein HPr
D VCD_003373 PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VCD_002354 PTS system glucose-specific IIB component/PTS system glucose-specific IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VCD_003343 PTS system N-acetylglucosamine-specific IIB component/PTS system N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VCD_000669 PTS system sucrose-specific IIB component/PTS system sucrose-specific IIC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D VCD_003422 PTS system trehalose-specific IIB component/PTS system trehalose-specific IIC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VCD_001409 PTS system N-acetylmuramic acid-specific IIB component/PTS system N-acetylmuramic acid-specific IIC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VCD_000295 PTS system mannitol-specific IIC component/PTS system mannitol-specific IIB component/PTS system mannitol-specific IIA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VCD_003067 PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VCD_003069 PTS system cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VCD_003068 PTS system cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VCD_000009 PTS system 3-keto-L-gulonate/L-ascorbate specific IIA component (PtxA) K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VCD_000008 PTS system 3-keto-L-gulonate/L-ascorbate specific IIC component (SgaT) K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VCD_000809 fructose-specific phosphocarrier protein HPr/PTS system fructose-specific IIA component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D VCD_000811 PTS system fructose-specific IIB component/PTS system fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VCD_002551 PTS system fructose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VCD_002554 phosphotransferase system mannitol/fructose-specific IIA domain protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VCD_000810 tagatose-6-phosphate kinase/1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D VCD_003649 phosphocarrier protein kinase/phosphorylase nitrogen regulation associated K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D VCD_001827 phosphocarrier protein nitrogen regulation associated K08485 ptsO; phosphocarrier protein NPr
D VCD_001829 PTS system nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VCD_002550 hypothetical protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:vcj03070]
D VCD_001919 type I secretion TolC precursor K12340 tolC; outer membrane protein
D VCD_002811 outer membrane protein K12340 tolC; outer membrane protein
D VCD_001634 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VCD_001633 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VCD_001636 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VCD_001637 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VCD_001638 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VCD_001639 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VCD_001640 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VCD_001641 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VCD_001642 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VCD_001643 general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D VCD_001635 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VCD_003583 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VCD_000632 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VCD_003582 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VCD_000633 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VCD_001302 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VCD_003771 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VCD_001787 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D VCD_003584 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VCD_001474 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VCD_001959 protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VCD_001604 signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VCD_001713 chaperone protein SecB K03071 secB; preprotein translocase subunit SecB
D VCD_001046 signal recognition particle subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VCD_000795 twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VCD_001553 twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VCD_001554 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D VCD_001555 twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D VCD_002931 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VCD_000215 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VCD_000122 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VCD_000216 Hcp protein K11903 hcp; type VI secretion system secreted protein Hcp
D VCD_002932 Hcp protein K11903 hcp; type VI secretion system secreted protein Hcp
D VCD_000131 type VI secretion lipoprotein/VasD K11906 vasD; type VI secretion system protein VasD
D VCD_000124 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D VCD_000129 ImpK/VasF outer membrane protein K11892 impK; type VI secretion system protein ImpK
D VCD_000128 ClpB protein K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:vcj02020]
D VCD_003604 phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VCD_003605 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VCD_000170 phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VCD_003603 phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VCD_000516 ABC-type phosphate transport system periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D VCD_001654 osmolarity sensory histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VCD_001653 two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D VCD_001675 copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VCD_001676 copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VCD_003017 signal transduction histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VCD_003016 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D VCD_001040 outer membrane stress sensor protease DegQ K04771 degP; serine protease Do [EC:3.4.21.107]
D VCD_000239 signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VCD_000238 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VCD_002227 flagellin protein FlaF K02406 fliC; flagellin
D VCD_002228 flagellin protein FlaD K02406 fliC; flagellin
D VCD_002229 flagellin B K02406 fliC; flagellin
D VCD_002149 flagellin protein FlaC K02406 fliC; flagellin
D VCD_002191 flagellin protein FlaD K02406 fliC; flagellin
D VCD_002300 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D VCD_003440 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VCD_000797 osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D VCD_000796 DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VCD_000610 sensor protein TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VCD_002660 TorCAD operon transcriptional regulatory protein TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D VCD_002685 cytochrome c-type protein TorY K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VCD_002686 trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VCD_002659 chaperone protein TorD K03533 torD; TorA specific chaperone
D VCD_001980 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VCD_001981 aerobic respiration control protein ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D VCD_003007 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D VCD_003006 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D VCD_003005 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D VCD_001480 chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D VCD_003534 sensor kinase CitA K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D VCD_003536 transcriptional regulatory protein CitB K07702 dpiA; two-component system, CitB family, response regulator CitB
D VCD_003529 [Citrate [pro-3S]-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D VCD_003528 citrate lyase beta chain K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D VCD_003527 citrate lyase beta chain K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D VCD_003526 citrate lyase alpha chain K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D VCD_003525 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D VCD_003524 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D VCD_000046 C4-dicarboxylate like transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D VCD_003155 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D VCD_003073 DNA-binding response regulator LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D VCD_000651 nitrate/nitrite sensor protein K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VCD_000652 nitrate/nitrite response regulator protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D VCD_001710 succinate dehydrogenase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VCD_001709 succinate dehydrogenase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VCD_001708 fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D VCD_001707 fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D VCD_000612 phosphoglycerate transporter protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VCD_000641 hexose phosphate uptake regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VCD_000642 sensor histidine protein kinase UhpB glucose-6-phosphate specific K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D VCD_000643 transcriptional regulatory protein UhpA K20264 fusR; two-component system, NarL family, response regulator FusR
D VCD_001901 BarA sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VCD_003131 BarA-associated response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VCD_001057 carbon storage regulator K03563 csrA; carbon storage regulator
D VCD_002724 sensory box sensor histidine kinase/response regulator VieS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VCD_002079 [Protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D VCD_002101 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D VCD_001620 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VCD_001619 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VCD_001622 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VCD_000635 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCD_000613 phosphoglycerate transport regulatory protein PgtC K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D VCD_000614 signal transduction histidine kinase K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VCD_000615 phosphoglycerate transport system transcriptional regulatory protein PgtA K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D VCD_002438 signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VCD_000105 hypothetical protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VCD_000104 C4-dicarboxylate transport transcriptional regulatory protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VCD_002437 C4-dicarboxylate transport transcriptional regulatory protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VCD_001831 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D VCD_001932 type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D VCD_002137 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCD_000252 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCD_002946 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCD_001339 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_003053 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000171 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000273 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000284 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000306 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000222 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000251 methyl-accepting chemotaxis protein III K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000255 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000074 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000364 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001091 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001158 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001564 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001400 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001916 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002517 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002840 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_003023 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002464 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002494 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002934 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002941 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002942 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002951 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002732 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002214 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_003061 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_003102 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000409 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000467 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000660 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000548 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000350 aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D VCD_000664 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VCD_001093 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VCD_002306 CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_002307 positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_000249 positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_000250 positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_002943 positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_002303 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_000248 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_002948 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_002301 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_000247 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_002947 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_002950 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_003020 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_003258 chemotaxis protein CheC --inhibitor of MCP methylation K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_002304 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCD_000254 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCD_002944 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCD_002774 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_002136 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_000380 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_002361 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_000583 autoinducer 2-binding periplasmic protein LuxP precursor K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VCD_000584 autoinducer 2 sensor kinase/phosphatase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VCD_000805 sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VCD_003318 phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D VCD_003319 regulatory protein LuxO K10912 luxO; two-component system, repressor protein LuxO
D VCD_001025 quorum-sensing regulator of virulence HapR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VCD_002434 TRAP-type C4-dicarboxylate transport system component K11688 dctP; C4-dicarboxylate-binding protein DctP
D VCD_002435 TRAP-type C4-dicarboxylate transport system small permease component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D VCD_002436 TRAP-type C4-dicarboxylate transport system large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D VCD_002234 flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VCD_002235 flagellar sensor histidine kinase FleS K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VCD_002236 sigma-54 dependent response regulator K10943 flrC; two-component system, response regulator FlrC
D VCD_001749 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VCD_001153 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D VCD_001035 ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D VCD_001034 ubiquinol--cytochrome c reductase cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VCD_001033 ubiquinol cytochrome C oxidoreductase cytochrome C1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D VCD_002904 cytochrome c oxidase subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D VCD_002905 cytochrome c oxidase subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D VCD_002906 cytochrome c oxidase subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D VCD_002907 cytochrome c oxidase subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D VCD_002806 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VCD_002532 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VCD_000461 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VCD_002807 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VCD_002533 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VCD_000460 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VCD_002534 hypothetical protein K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D VCD_002898 RTX toxin transporter K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D VCD_002899 membrane-fusion protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D VCD_002900 hypothetical protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D VCD_001919 type I secretion TolC precursor K12340 tolC; outer membrane protein
D VCD_002811 outer membrane protein K12340 tolC; outer membrane protein
D VCD_003301 low molecular weight protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D VCD_003417 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VCD_003416 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VCD_003260 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB
D VCD_000257 serine phosphatase RsbU regulator of sigma subunit K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D VCD_000256 anti-anti-sigma regulatory factor K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor
D VCD_002134 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:vcj04148]
D VCD_000277 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D VCD_001035 ubiquinol-cytochrome C reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:vcj02024]
D VCD_001049 S-ribosylhomocysteine lyase/autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VCD_000583 autoinducer 2-binding periplasmic protein LuxP precursor K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VCD_000584 autoinducer 2 sensor kinase/phosphatase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VCD_000804 8-amino-7-oxononanoate synthase/CqsA K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D VCD_000805 sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VCD_003318 phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D VCD_003319 regulatory protein LuxO K10912 luxO; two-component system, repressor protein LuxO
D VCD_001276 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VCD_001025 quorum-sensing regulator of virulence HapR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VCD_001716 hypothetical protein K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VCD_003169 anthranilate synthase aminase component K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VCD_003170 anthranilate synthase amidotransferase component K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VCD_002868 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VCD_000304 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VCD_003626 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VCD_000239 signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VCD_000238 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VCD_000796 DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VCD_000642 sensor histidine protein kinase UhpB glucose-6-phosphate specific K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D VCD_000643 transcriptional regulatory protein UhpA K20264 fusR; two-component system, NarL family, response regulator FusR
D VCD_002755 hypothetical protein K20276 bapA; large repetitive protein
D VCD_001872 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_002383 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_002007 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_001368 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_001749 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VCD_001246 zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D VCD_003088 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VCD_002071 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VCD_003250 oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VCD_003249 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VCD_003248 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VCD_003247 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VCD_000361 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VCD_003246 oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VCD_003789 (GlcNAc)2 ABC transporter: substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VCD_000245 oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VCD_001439 peptide ABC transporter peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VCD_003790 peptide ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VCD_000244 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VCD_001438 peptide ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VCD_003791 peptide ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VCD_000243 dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VCD_001437 peptide ABC transporter permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VCD_003792 (GlcNAc)2 ABC transporter ATP-binding component 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VCD_001440 cell division transporter ATP-binding protein FtsE K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VCD_000242 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VCD_003793 (GlcNAc)2 ABC transporter ATP-binding component 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VCD_001474 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VCD_001613 alkaline serine exoprotease A precursor K14645 K14645; serine protease [EC:3.4.21.-]
D VCD_001302 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VCD_003771 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VCD_001787 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D VCD_003584 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VCD_001959 protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VCD_001604 signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VCD_001713 chaperone protein SecB K03071 secB; preprotein translocase subunit SecB
D VCD_001046 signal recognition particle subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae [PATH:vcj05111]
D VCD_001049 S-ribosylhomocysteine lyase/autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VCD_000584 autoinducer 2 sensor kinase/phosphatase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VCD_000583 autoinducer 2-binding periplasmic protein LuxP precursor K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VCD_000804 8-amino-7-oxononanoate synthase/CqsA K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D VCD_000805 sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VCD_003318 phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D VCD_003319 regulatory protein LuxO K10912 luxO; two-component system, repressor protein LuxO
D VCD_001276 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VCD_001716 hypothetical protein K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VCD_003293 transcriptional regulator LysR family K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D VCD_000383 transcriptional regulator VpsT K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D VCD_003654 transcriptional regulator VpsR K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D VCD_003418 low molecular weight protein tyrosine phosphatase K20945 vpsU; tyrosine-protein phosphatase [EC:3.1.3.48]
D VCD_003417 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D VCD_003416 UDP-N-acetyl-D-mannosaminuronate dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D VCD_001715 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCD_003411 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCD_003415 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VCD_003414 hypothetical protein K20921 vpsD; polysaccharide biosynthesis protein VpsD
D VCD_003413 hypothetical protein K20946 vpsE; polysaccharide biosynthesis protein VpsE
D VCD_003412 hypothetical protein K20947 vpsF; polysaccharide biosynthesis protein VpsF
D VCD_003409 hypothetical protein K20922 vpsI; polysaccharide biosynthesis protein VpsI
D VCD_003408 hypothetical protein K20948 vpsJ; polysaccharide biosynthesis protein VpsJ
D VCD_003407 N-acetylmannosaminyltransferase K25886 vpsK; polysaccharide biosynthesis protein VpsK
D VCD_003401 Capsular polysaccharide synthesis enzyme CpsA sugar transferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D VCD_003400 Capsular polysaccharide synthesis enzyme CpsB K20920 vpsM; polysaccharide biosynthesis protein VpsM
D VCD_003399 Capsular polysaccharide synthesis enzyme CpsC polysaccharide export K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D VCD_003398 Capsular polysaccharide synthesis enzyme CpsD exopolysaccharide synthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VCD_003397 hypothetical protein K20949 vpsP; polysaccharide biosynthesis protein VpsP
D VCD_003396 hypothetical protein K20950 vpsQ; polysaccharide biosynthesis protein VpsQ
D VCD_001633 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VCD_001634 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VCD_001635 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VCD_001636 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VCD_001637 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VCD_001638 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VCD_001639 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VCD_001640 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VCD_001641 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VCD_001642 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VCD_001643 general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D VCD_001644 general secretion pathway protein N K02463 gspN; general secretion pathway protein N
D VCD_002473 hemolysin-related protein Vcp K20951 bap1; extracellular matrix protein
D VCD_003404 hemolysin-related protein RbmC K20952 rbmC; rugosity and biofilm structure modulator C
D VCD_003406 RbmA protein K20953 rbmA; rugosity and biofilm structure modulator A
D VCD_003502 toxin co-regulated pilus biosynthesis protein P transcriptional activator of ToxT promoter K10920 tcpP; toxin coregulated pilus biosynthesis protein P
D VCD_003501 toxin co-regulated pilus biosynthesis protein H transcriptional activator of ToxT promoter K10919 tcpH; toxin coregulated pilus biosynthesis protein H
D VCD_003354 transcriptional activator ToxR K10921 toxR; cholera toxin transcriptional activator
D VCD_003355 transmembrane regulatory protein ToxS K10922 toxS; transmembrane regulatory protein ToxS
D VCD_003490 TCP pilus virulence regulatory protein ToxT transcription activator AraC family K10923 tcpN; AraC family transcriptional regulator, TCP pilus virulence regulatory protein
D VCD_002522 outer membrane protein OmpT K10940 ompT; outer membrane protein OmpT
D VCD_003778 outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VCD_003500 toxin co-regulated pilin A K10930 tcpA; toxin coregulated pilin
D VCD_003499 toxin co-regulated pilus biosynthesis protein B K10931 tcpB; toxin coregulated pilus biosynthesis protein B
D VCD_003497 toxin co-regulated pilus biosynthesis protein C K10932 tcpC; toxin coregulated pilus biosynthesis outer membrane protein C
D VCD_003495 toxin co-regulated pilus biosynthesis protein D K10933 tcpD; toxin coregulated pilus biosynthesis protein D
D VCD_003492 toxin co-regulated pilus biosynthesis protein E anchors TcpT to membrane K10934 tcpE; toxin coregulated pilus biosynthesis protein E
D VCD_003491 toxin co-regulated pilus biosynthesis protein F K10935 tcpF; toxin coregulated pilus biosynthesis protein F
D VCD_003503 toxin co-regulated pilus biosynthesis protein I chemoreceptor negative regulator of TcpA K10961 tcpI; toxin coregulated pilus biosynthesis protein I
D VCD_003498 toxin co-regulated pilus biosynthesis protein Q K10962 tcpQ; toxin coregulated pilus biosynthesis protein Q
D VCD_003496 toxin co-regulated pilus biosynthesis protein R K10963 tcpR; toxin coregulated pilus biosynthesis protein R
D VCD_003494 toxin co-regulated pilus biosynthesis protein S K10964 tcpS; toxin coregulated pilus biosynthesis protein S
D VCD_003493 toxin co-regulated pilus biosynthesis protein T K10965 tcpT; toxin coregulated pilus biosynthesis protein T
D VCD_003485 accessory colonization factor AcfA K10936 acfA; accessory colonization factor AcfA
D VCD_003488 accessory colonization factor AcfB K10937 acfB; accessory colonization factor AcfB
D VCD_003487 accessory colonization factor AcfC K10938 acfC; accessory colonization factor AcfC
D VCD_003484 accessory colonization factor AcfD precursor K10939 acfD; accessory colonization factor AcfD
D VCD_000750 enterotoxin A subunit (NAD(+)--diphthamide ADP-ribosyltransferase) K10928 ctxA; cholera enterotoxin subunit A [EC:2.4.2.36]
D VCD_000749 enterotoxin B subunit K10929 ctxB; cholera enterotoxin subunit B
D VCD_001025 quorum-sensing regulator of virulence HapR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VCD_000466 neutral protease precursor K08604 hap; vibriolysin [EC:3.4.24.25]
D VCD_001901 BarA sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VCD_003131 BarA-associated response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VCD_001057 carbon storage regulator K03563 csrA; carbon storage regulator
D VCD_003373 PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VCD_002354 PTS system glucose-specific IIB component/PTS system glucose-specific IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VCD_001582 adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D VCD_001749 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VCD_001330 NA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VCD_002783 GGDEF family protein K20954 acgB; diguanylate cyclase [EC:2.7.7.65]
D VCD_003237 GGDEF family protein K20955 cdgK; diguanylate cyclase [EC:2.7.7.65]
D VCD_000166 transcriptional regulator CdgA K20956 cdgA; diguanylate cyclase [EC:2.7.7.65]
D VCD_003274 GGDEF domain protein K20957 cdgH; diguanylate cyclase [EC:2.7.7.65]
D VCD_002965 GGDEF family protein K20959 cdgM; diguanylate cyclase [EC:2.7.7.65]
D VCD_000395 sensory box/GGDEF family protein K20960 K20960; diguanylate cyclase [EC:2.7.7.65]
D VCD_001900 GGDEF domain protein K20961 vpvC; diguanylate cyclase [EC:2.7.7.65]
D VCD_000537 GGDEF family protein K20962 cdgC; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCD_002784 diguanylate cyclase/phosphodiesterase domain 2 (EAL) K20963 acgA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCD_002725 response regulator VieA K13246 vieA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCD_001596 hypothetical protein K07181 cdgJ; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCD_001090 hypothetical protein K07181 cdgJ; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCD_001590 sensory box/GGDEF family protein K20964 cdpA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCD_003758 C-di-GMP phosphodiesterase A-related protein K20965 rocS; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCD_003619 C-di-GMP phosphodiesterase MbaA repressor of biofilm formation K20966 mbaA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VCD_001218 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D VCD_001214 MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VCD_001215 MSHA pilin protein MshB K10925 mshB; MSHA pilin protein MshB
D VCD_001213 MSHA pilin protein MshC K10926 mshC; MSHA pilin protein MshC
D VCD_001212 MSHA pilin protein MshD K10927 mshD; MSHA pilin protein MshD
D VCD_002234 flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VCD_001831 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D VCD_001071 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D VCD_002235 flagellar sensor histidine kinase FleS K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VCD_002236 sigma-54 dependent response regulator K10943 flrC; two-component system, response regulator FlrC
D VCD_002300 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:vcj02030]
D VCD_001339 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_003053 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000171 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000273 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000284 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000306 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000222 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000251 methyl-accepting chemotaxis protein III K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000255 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000074 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000364 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001091 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001158 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001564 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001400 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001916 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002517 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002840 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_003023 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002464 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002494 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002934 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002941 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002942 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002951 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002732 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002214 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_003061 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_003102 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000409 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000467 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000660 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000548 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000350 aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D VCD_000664 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VCD_001093 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VCD_000389 maltose/maltodextrin ABC transporter substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VCD_000116 ribose ABC transport system ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D VCD_003012 galactose/methyl galactoside ABC transport system D-galactose-binding MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D VCD_002303 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_000248 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_002948 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_002306 CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_002307 positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_000249 positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_000250 positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_002943 positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_002301 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_000247 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_002947 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_002950 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_003020 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_003258 chemotaxis protein CheC --inhibitor of MCP methylation K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_003257 chemotaxis protein CheC --inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D VCD_002302 chemotaxis response - phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D VCD_001247 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D VCD_002304 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCD_000254 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCD_002944 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCD_002774 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_002136 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_000380 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_002361 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_000253 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D VCD_002137 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCD_000252 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCD_002946 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCD_002239 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VCD_002245 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VCD_002246 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VCD_003440 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VCD_003439 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:vcj02040]
D VCD_002237 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VCD_002238 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VCD_002239 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VCD_002240 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VCD_002241 flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VCD_002242 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D VCD_002243 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VCD_002244 flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VCD_001563 flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VCD_002245 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VCD_002246 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VCD_002247 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D VCD_002248 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VCD_002249 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VCD_002250 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VCD_002297 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VCD_002251 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VCD_002135 flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VCD_002138 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VCD_002139 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VCD_002140 flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VCD_002141 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D VCD_002142 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D VCD_002143 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VCD_002144 flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D VCD_002145 flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D VCD_002146 flagellar protein flgJ (peptidoglycan hydrolase) K02395 flgJ; peptidoglycan hydrolase FlgJ
D VCD_002147 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D VCD_002148 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VCD_002131 hypothetical protein K24344 flgO; flagellar H-ring protein FlgO
D VCD_002132 hypothetical protein K09860 flgP; outer membrane protein FlgP
D VCD_002130 hypothetical protein K24343 flgT; flagellar H-ring protein FlgT
D VCD_001762 sodium-type polar flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VCD_003330 sodium-type flagellar protein MotY precursor K21218 motY; sodium-type flagellar protein MotY
D VCD_002227 flagellin protein FlaF K02406 fliC; flagellin
D VCD_002228 flagellin protein FlaD K02406 fliC; flagellin
D VCD_002229 flagellin B K02406 fliC; flagellin
D VCD_002149 flagellin protein FlaC K02406 fliC; flagellin
D VCD_002191 flagellin protein FlaD K02406 fliC; flagellin
D VCD_002231 flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D VCD_002233 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D VCD_003440 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VCD_003439 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D VCD_002134 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VCD_002133 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D VCD_001088 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D VCD_002234 flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VCD_001831 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D VCD_002236 sigma-54 dependent response regulator K10943 flrC; two-component system, response regulator FlrC
D VCD_002300 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D VCD_001907 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D VCD_001233 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection [PATH:vcj05110]
D VCD_000034 cytolysin and hemolysin HlyA Pore-forming toxin K10948 hlyA; hemolysin
D VCD_000750 enterotoxin A subunit (NAD(+)--diphthamide ADP-ribosyltransferase) K10928 ctxA; cholera enterotoxin subunit A [EC:2.4.2.36]
D VCD_000749 enterotoxin B subunit K10929 ctxB; cholera enterotoxin subunit B
D VCD_002587 sialidase K23550 nanH; sialidase [EC:3.2.1.18]
D VCD_000752 accessory cholera enterotoxin K10952 ace; accessory cholera enterotoxin
D VCD_002895 autotransporter adhesin K10953 rtxA; RTX toxin RtxA
D VCD_000751 zona occludens toxin K10954 zot; zona occludens toxin
D VCD_003500 toxin co-regulated pilin A K10930 tcpA; toxin coregulated pilin
D VCD_003499 toxin co-regulated pilus biosynthesis protein B K10931 tcpB; toxin coregulated pilus biosynthesis protein B
D VCD_003497 toxin co-regulated pilus biosynthesis protein C K10932 tcpC; toxin coregulated pilus biosynthesis outer membrane protein C
D VCD_003495 toxin co-regulated pilus biosynthesis protein D K10933 tcpD; toxin coregulated pilus biosynthesis protein D
D VCD_003492 toxin co-regulated pilus biosynthesis protein E anchors TcpT to membrane K10934 tcpE; toxin coregulated pilus biosynthesis protein E
D VCD_003491 toxin co-regulated pilus biosynthesis protein F K10935 tcpF; toxin coregulated pilus biosynthesis protein F
D VCD_000513 chitin binding protein K21712 gbpA; N-acetylglucosamine-binding protein A
D VCD_000466 neutral protease precursor K08604 hap; vibriolysin [EC:3.4.24.25]
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:vcj01501]
D VCD_003778 outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VCD_002041 AmpG permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D VCD_003629 beta N-acetyl-glucosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D VCD_003250 oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VCD_003249 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VCD_003248 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VCD_003247 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VCD_000361 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VCD_003246 oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VCD_001443 transcriptional regulator TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D VCD_001444 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCD_003420 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCD_001445 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D VCD_001919 type I secretion TolC precursor K12340 tolC; outer membrane protein
D VCD_002811 outer membrane protein K12340 tolC; outer membrane protein
D VCD_001728 multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VCD_003386 penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VCD_001946 cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:vcj01502]
D VCD_000746 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VCD_001252 alanine racemase biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D VCD_001948 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D VCD_001949 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VCD_001952 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:vcj01503]
D VCD_000241 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VCD_002697 peptide transport periplasmic protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D VCD_002696 peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D VCD_002695 peptide transport system permease protein SapC K19228 sapC; cationic peptide transport system permease protein
D VCD_002694 peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D VCD_002693 peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D VCD_001675 copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VCD_001676 copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VCD_001279 N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VCD_000180 hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VCD_001040 outer membrane stress sensor protease DegQ K04771 degP; serine protease Do [EC:3.4.21.107]
D VCD_001502 periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VCD_002042 peptidyl-prolyl cis-trans isomerase PpiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VCD_001444 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCD_003420 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCD_001445 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D VCD_001919 type I secretion TolC precursor K12340 tolC; outer membrane protein
D VCD_002811 outer membrane protein K12340 tolC; outer membrane protein
D VCD_002093 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:vcj01000]
C 01001 Protein kinases [BR:vcj01001]
D VCD_001185 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VCD_003512 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VCD_003049 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VCD_002621 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VCD_002514 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VCD_003398 Capsular polysaccharide synthesis enzyme CpsD exopolysaccharide synthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VCD_003604 phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VCD_001654 osmolarity sensory histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VCD_003017 signal transduction histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VCD_001675 copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VCD_000239 signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VCD_000797 osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D VCD_000610 sensor protein TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VCD_001980 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VCD_000651 nitrate/nitrite sensor protein K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VCD_000642 sensor histidine protein kinase UhpB glucose-6-phosphate specific K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D VCD_001901 BarA sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VCD_002724 sensory box sensor histidine kinase/response regulator VieS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VCD_003074 sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D VCD_003534 sensor kinase CitA K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D VCD_002771 sensor kinase CitA K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D VCD_003627 autolysin sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VCD_001620 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VCD_000614 signal transduction histidine kinase K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VCD_002438 signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VCD_000105 hypothetical protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VCD_002854 signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VCD_003256 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VCD_002303 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_000248 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_002948 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_000584 autoinducer 2 sensor kinase/phosphatase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VCD_000805 sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VCD_002235 flagellar sensor histidine kinase FleS K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VCD_003788 chitin catabolic cascade sensor histidine kinase ChiS K19694 chiS; two-component system, sensor histidine kinase ChiS
C 01009 Protein phosphatases and associated proteins [BR:vcj01009]
D VCD_001679 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCD_003353 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VCD_002003 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:vcj01002]
D VCD_003637 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D VCD_001929 leader peptidase (Prepilin peptidase)/N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VCD_003489 TCP pilin signal peptidase TcpA processing K10966 tcpJ; toxin coregulated pilus biosynthesis protein J [EC:3.4.23.43 2.1.1.-]
D VCD_003558 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VCD_002839 lipoprotein NlpC K13695 nlpC; probable lipoprotein NlpC
D VCD_003334 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VCD_001975 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VCD_001977 glutamate synthase [NADPH] large chain K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VCD_001119 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VCD_003347 asparagine synthetase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VCD_002035 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme K03152 thiJ; protein deglycase [EC:3.5.1.124]
D VCD_000180 hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VCD_003083 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D VCD_003267 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D VCD_002880 membrane alanine aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D VCD_001425 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D VCD_000466 neutral protease precursor K08604 hap; vibriolysin [EC:3.4.24.25]
D VCD_000030 metalloprotease K09607 ina; immune inhibitor A [EC:3.4.24.-]
D VCD_002727 microbial collagenase secreted K01387 colA; microbial collagenase [EC:3.4.24.3]
D VCD_002670 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D VCD_001051 protease insulinase family protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D VCD_001856 cytosol aminopeptidase PepA K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VCD_003571 peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D VCD_002221 N-succinyl-L,L-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VCD_000070 tripeptide aminopeptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D VCD_002996 peptidase M20A family K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D VCD_002062 aminoacyl-histidine dipeptidase (Peptidase D) K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VCD_000161 cell wall endopeptidase family M23/M37 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VCD_001102 cell wall endopeptidase family M23/M37 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VCD_002080 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D VCD_001535 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D VCD_000511 bacterial leucyl aminopeptidase K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10]
D VCD_002933 thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D VCD_003774 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VCD_003225 hypothetical protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D VCD_002211 zinc metalloprotease K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D VCD_002088 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D VCD_001040 outer membrane stress sensor protease DegQ K04771 degP; serine protease Do [EC:3.4.21.107]
D VCD_001041 outer membrane stress sensor protease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D VCD_001613 alkaline serine exoprotease A precursor K14645 K14645; serine protease [EC:3.4.21.-]
D VCD_000176 protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D VCD_001003 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VCD_003389 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VCD_000463 murein-DD-endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D VCD_003779 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D VCD_002440 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D VCD_003716 hypothetical protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D VCD_002442 ATP-dependent protease La Type I K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D VCD_002891 ATP-dependent protease La Type II K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D VCD_001559 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D VCD_003726 error-prone repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D VCD_001892 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D VCD_002878 tail-specific protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D VCD_000190 protease-related protein K08676 tri; tricorn protease [EC:3.4.21.-]
D VCD_002374 protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D VCD_003282 SohB protein peptidase U7 family K04774 sohB; serine protease SohB [EC:3.4.21.-]
D VCD_001565 protein GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D VCD_000892 microcin immunity protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D VCD_000944 microcin immunity protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D VCD_001692 ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D VCD_001760 isoaspartyl aminopeptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VCD_001421 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VCD_000770 gamma-glutamyltranspeptidase K22602 hpxW; oxamate amidohydrolase [EC:3.5.1.126]
D VCD_003607 hypothetical protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D VCD_003760 hypothetical protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D VCD_003759 hypothetical protein K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D VCD_001825 PmbA protein K03592 pmbA; PmbA protein
D VCD_001200 TldD protein probably a protease K03568 tldD; TldD protein
D VCD_001273 HflC protein K04087 hflC; modulator of FtsH protease HflC
D VCD_001274 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:vcj01003]
D VCD_002652 glycogen synthase ADP-glucose transglucosylase K00703 glgA; starch synthase [EC:2.4.1.21]
D VCD_003807 multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VCD_001728 multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VCD_003414 hypothetical protein K20921 vpsD; polysaccharide biosynthesis protein VpsD
D VCD_003409 hypothetical protein K20922 vpsI; polysaccharide biosynthesis protein VpsI
D VCD_003407 N-acetylmannosaminyltransferase K25886 vpsK; polysaccharide biosynthesis protein VpsK
D VCD_003063 glucans biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:vcj01005]
D VCD_002093 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VCD_002094 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VCD_001957 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VCD_002091 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VCD_002526 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VCD_002485 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VCD_001403 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VCD_001404 lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D VCD_002495 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D VCD_001384 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VCD_000241 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VCD_001390 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D VCD_002203 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VCD_002487 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VCD_001835 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D VCD_001836 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VCD_001392 lipopolysaccharide biosynthesis glycosyltransferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D VCD_001381 hypothetical protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D VCD_001380 O-antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D VCD_001391 lipopolysaccharide heptosyltransferase I K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D VCD_002110 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D VCD_003424 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D VCD_001918 ADP-heptose synthase/D-glycero-beta-D-manno-heptose 7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D VCD_001377 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D VCD_001359 lipid carrier : UDP-N-acetylgalactosaminyltransferase K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:vcj01011]
D VCD_001844 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VCD_001306 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VCD_001953 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D VCD_001950 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VCD_001947 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VCD_000746 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VCD_001252 alanine racemase biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D VCD_001614 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D VCD_000892 microcin immunity protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D VCD_000944 microcin immunity protein MccF K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D VCD_001949 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VCD_001952 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D VCD_001079 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VCD_001868 membrane-associated phospholipid phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VCD_003640 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D VCD_001728 multimodular transpeptidase-transglycosylase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VCD_003807 multimodular transpeptidase-transglycosylase K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VCD_003386 penicillin-binding protein 2 (PBP-2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VCD_001946 cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VCD_001003 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VCD_003389 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VCD_003779 D-alanyl-D-alanine carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D VCD_000463 murein-DD-endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D VCD_000180 hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VCD_003083 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB
D VCD_000161 cell wall endopeptidase family M23/M37 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VCD_001102 cell wall endopeptidase family M23/M37 K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VCD_003622 soluble lytic murein transglycosylase precursor K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D VCD_002031 membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D VCD_002409 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D VCD_001157 membrane-bound lytic murein transglycosylase C precursor K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D VCD_002103 membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D VCD_003462 transglycosylase Slt family K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D VCD_002350 hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D VCD_003388 rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D VCD_001279 N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VCD_001934 N-acetylmuramoyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D VCD_000179 outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:vcj01004]
D VCD_002345 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VCD_000569 3-oxoacyl-[acyl-carrier-protein] synthase KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VCD_002344 3-oxoacyl-[acyl-carrier-protein] synthase KASIII K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VCD_002260 3-oxoacyl-[acyl-carrier-protein] synthase KASI K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VCD_002348 3-oxoacyl-[acyl-carrier-protein] synthase KASII K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VCD_002346 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VCD_002890 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D VCD_002092 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VCD_002642 short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VCD_000538 uncharacterized paraquat-inducible protein B K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VCD_000539 arylesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D VCD_003279 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D VCD_002677 acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D VCD_001322 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VCD_002999 propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D VCD_000496 acetoacetyl-CoA synthetase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VCD_001872 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_002383 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_002007 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_001368 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_001560 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VCD_002343 phosphate:acyl-ACP acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D VCD_001082 acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VCD_001845 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:vcj01008]
D VCD_003555 isochorismatase of siderophore biosynthesis K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D VCD_003545 phosphopantetheinyl transferase component of siderophore synthetase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D VCD_003554 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D VCD_002798 enterobactin synthetase component F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D VCD_002129 non-ribosomal peptide synthetase modules siderophore biosynthesis K12237 vibF; nonribosomal peptide synthetase VibF
D VCD_003551 amide synthase component of siderophore synthetase K04778 vibH; vibriobactin synthetase
C 01006 Prenyltransferases [BR:vcj01006]
D VCD_003442 octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferase/geranylgeranyl pyrophosphate synthetase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D VCD_001172 octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferase/geranylgeranyl pyrophosphate synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VCD_002085 undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VCD_001277 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D VCD_001694 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D VCD_001561 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:vcj01007]
D VCD_002124 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VCD_003341 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VCD_003812 glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D VCD_003780 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCD_001141 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCD_001740 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VCD_002528 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VCD_002293 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VCD_003306 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VCD_003638 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VCD_001854 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VCD_003381 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VCD_003655 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VCD_003177 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VCD_003054 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VCD_003566 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VCD_001489 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VCD_001488 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VCD_003232 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VCD_003455 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VCD_000988 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VCD_001060 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VCD_003562 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VCD_003126 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VCD_003125 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VCD_000814 aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VCD_001487 valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D VCD_002390 aspartate/tyrosine/aromatic aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VCD_003058 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VCD_003208 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VCD_000447 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VCD_003229 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VCD_001745 acetylornithine aminotransferase/N-succinyl-L,L-diaminopimelate aminotransferase/succinylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VCD_000500 diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VCD_003231 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VCD_003785 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VCD_001497 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VCD_000715 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D VCD_001231 serine--pyruvate aminotransferase/L-alanine:glyoxylate aminotransferase K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VCD_003184 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VCD_001373 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:vcj00194]
D VCD_001459 ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VCD_001460 ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VCD_001461 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VCD_001462 ATP synthase alpha chain K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VCD_001463 ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VCD_001464 ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VCD_001465 ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VCD_001466 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VCD_001467 ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:vcj03000]
D VCD_000052 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VCD_003490 TCP pilus virulence regulatory protein ToxT transcription activator AraC family K10923 tcpN; AraC family transcriptional regulator, TCP pilus virulence regulatory protein
D VCD_002287 signal transduction histidine kinase K19693 tfoS; AraC family transcriptional regulator, chitin signaling transcriptional activator
D VCD_000322 3-methyladenine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VCD_003436 glycine cleavage system transcriptional activator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VCD_001448 HTH-type transcriptional regulator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D VCD_002673 transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D VCD_002797 transcriptional regulator LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D VCD_003643 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D VCD_001727 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VCD_003592 transcriptional regulator LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VCD_001123 chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VCD_001871 transcriptional regulator LysR family K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D VCD_003293 transcriptional regulator LysR family K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D VCD_002455 regulatory protein CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D VCD_000457 D-serine dehydratase transcriptional activator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D VCD_000320 transcriptional regulator LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D VCD_002822 glycerol-3-phosphate regulon repressor DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D VCD_000394 glycerol-3-phosphate regulon repressor DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D VCD_000007 hypothetical protein K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor
D VCD_002011 galactose operon repressor GalR-LacI-like transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VCD_000114 ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VCD_002818 possible regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VCD_001690 transcriptional (co)regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D VCD_000808 fructose repressor FruR LacI family K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D VCD_000668 sucrose operon repressor ScrR LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D VCD_003423 trehalose operon transcriptional repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D VCD_002658 purine nucleotide synthesis repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D VCD_001331 gluconate utilization system Gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D VCD_003138 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D VCD_002462 transcriptional regulator for fatty acid degradation FadR GntR family K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D VCD_001940 transcriptional repressor for pyruvate dehydrogenase complex K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D VCD_003737 tetracycline repressor protein K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein
D VCD_001443 transcriptional regulator TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D VCD_001402 transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D VCD_001025 quorum-sensing regulator of virulence HapR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VCD_002636 transcriptional regulator K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D VCD_000731 transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VCD_001609 unsaturated fatty acid biosythesis repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D VCD_001539 transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D VCD_000274 PutR transcriptional activator of PutA and PutP K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VCD_002458 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VCD_002666 transcriptional regulator AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VCD_003280 transcriptional regulator AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D VCD_001227 hypothetical protein K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein
D VCD_000383 transcriptional regulator VpsT K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D VCD_000220 transcriptional activator of maltose regulon MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D VCD_000333 organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D VCD_003364 HTH-type transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VCD_001343 transcriptional regulator MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D VCD_000157 redox-sensitive transcriptional activator soxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D VCD_000182 transcriptional regulator MerR family K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D VCD_002263 ferric uptake regulation protein FUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D VCD_001246 zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D VCD_001749 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VCD_002912 fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D VCD_003579 iron-sulfur cluster regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D VCD_003272 transcriptional regulator ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D VCD_003642 transcriptional activator HlyU K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D VCD_002398 transcriptional regulator YidN, Cro/CI family K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D VCD_001716 hypothetical protein K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VCD_001411 transcriptional regulator RpiR family K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D VCD_003194 glucose repressor HexR for Entner-Doudoroff pathway RpiR family K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D VCD_001305 biotin-protein ligase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D VCD_001330 NA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VCD_003621 hypothetical protein K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D VCD_000741 SgrR sugar-phosphate stress transcriptional activator of SgrS small RNA K11925 sgrR; SgrR family transcriptional regulator
D VCD_002234 flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VCD_003654 transcriptional regulator VpsR K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D VCD_002557 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VCD_000127 sigma-54 dependent transcriptional regulator K11908 vasH; sigma-54 dependent transcriptional regulator
D VCD_000067 anaerobic nitric oxide reductase transcription regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator
D VCD_000426 sugar diacid utilization regulator SdaR K02647 cdaR; carbohydrate diacid regulator
D VCD_000869 hypothetical protein K07726 K07726; putative transcriptional regulator
D VCD_001686 methionine repressor MetJ K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D VCD_000269 proline dehydrogenase (Proline oxidase)/delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VCD_002045 cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D VCD_001468 chromosome (plasmid) partitioning protein ParB/stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VCD_000230 chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VCD_003348 transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D VCD_001176 arginine pathway regulatory protein ArgR repressor of arg regulon K03402 argR; transcriptional regulator of arginine metabolism
D VCD_003345 N-acetylglucosamine-6P-responsive transcriptional repressor NagC ROK family K02565 nagC; N-acetylglucosamine repressor
D VCD_002360 Mlc transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon K15545 mlc; transcriptional regulator of PTS gene
D VCD_000293 mannitol operon repressor K02562 mtlR; mannitol operon repressor
D VCD_003028 transcriptional repressor protein TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D VCD_001342 transcriptional activator of cad operon K03765 cadC; transcriptional activator of cad operon
D VCD_002216 glycine cleavage system transcriptional antiactivator GcvR K03567 gcvR; glycine cleavage system transcriptional repressor
D VCD_002698 Psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D VCD_002701 phage shock protein C K03973 pspC; phage shock protein C
D VCD_000712 regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D VCD_002586 transcriptional regulator K07733 alpA; prophage regulatory protein
D VCD_002564 hypothetical protein K07733 alpA; prophage regulatory protein
D VCD_001110 transcriptional regulator K07733 alpA; prophage regulatory protein
D VCD_001139 hypothetical protein K07735 algH; putative transcriptional regulator
D VCD_003811 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D VCD_002070 ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D VCD_002067 transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl
C 03021 Transcription machinery [BR:vcj03021]
D VCD_001792 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VCD_001296 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VCD_001295 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VCD_001658 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VCD_001088 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D VCD_001071 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D VCD_002039 RNA polymerase sigma-70 factor ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VCD_001887 RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VCD_003297 RNA polymerase sigma-70 factor ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VCD_001607 RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D VCD_001831 RNA polymerase sigma-54 factor RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D VCD_002300 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D VCD_001851 RNA polymerase associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D VCD_003769 transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D VCD_002075 transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D VCD_001301 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D VCD_001032 stringent starvation protein A K03599 sspA; stringent starvation protein A
D VCD_001031 stringent starvation protein B K03600 sspB; stringent starvation protein B
D VCD_001888 sigma factor RpoE negative regulatory protein RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D VCD_001889 sigma factor RpoE negative regulatory protein RseB precursor K03598 rseB; sigma-E factor negative regulatory protein RseB
D VCD_001890 sigma factor RpoE regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D VCD_003811 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D VCD_003777 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D VCD_001652 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D VCD_001314 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VCD_000386 transcriptional antiterminator K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:vcj03019]
D VCD_002337 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VCD_001203 cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D VCD_001893 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VCD_001764 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VCD_001282 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D VCD_001316 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D VCD_000047 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VCD_000552 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VCD_002939 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VCD_000519 cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VCD_001419 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VCD_001907 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VCD_003764 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VCD_001314 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VCD_001679 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VCD_003472 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VCD_001703 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCD_000504 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCD_001276 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VCD_003601 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VCD_003596 hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VCD_003813 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D VCD_003650 adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D VCD_001057 carbon storage regulator K03563 csrA; carbon storage regulator
D VCD_001225 MSHA biogenesis protein MshH K18765 csrD; RNase E specificity factor CsrD
D VCD_001695 ribonuclease E inhibitor RraA K02553 rraA; regulator of ribonuclease activity A
D VCD_001983 ribonuclease E inhibitor RraA K02553 rraA; regulator of ribonuclease activity A
D VCD_001198 hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D VCD_001828 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D VCD_002961 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D VCD_003808 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:vcj03011]
D VCD_002447 SSU ribosomal protein S1p K02945 RP-S1; small subunit ribosomal protein S1
D VCD_002081 SSU ribosomal protein S2p (SAe) K02967 RP-S2; small subunit ribosomal protein S2
D VCD_001773 SSU ribosomal protein S3p (S3e) K02982 RP-S3; small subunit ribosomal protein S3
D VCD_001791 SSU ribosomal protein S4p (S9e) K02986 RP-S4; small subunit ribosomal protein S4
D VCD_001784 SSU ribosomal protein S5p (S2e) K02988 RP-S5; small subunit ribosomal protein S5
D VCD_001258 SSU ribosomal protein S6p K02990 RP-S6; small subunit ribosomal protein S6
D VCD_001263 SSU ribosomal protein S7p (S5e) K02992 RP-S7; small subunit ribosomal protein S7
D VCD_001781 SSU ribosomal protein S8p (S15Ae) K02994 RP-S8; small subunit ribosomal protein S8
D VCD_001036 SSU ribosomal protein S9p (S16e) K02996 RP-S9; small subunit ribosomal protein S9
D VCD_001766 SSU ribosomal protein S10p (S20e) K02946 RP-S10; small subunit ribosomal protein S10
D VCD_001790 SSU ribosomal protein S11p (S14e) K02948 RP-S11; small subunit ribosomal protein S11
D VCD_001264 SSU ribosomal protein S12p (S23e) K02950 RP-S12; small subunit ribosomal protein S12
D VCD_001789 SSU ribosomal protein S13p (S18e) K02952 RP-S13; small subunit ribosomal protein S13
D VCD_001780 SSU ribosomal protein S14p (S29e) K02954 RP-S14; small subunit ribosomal protein S14
D VCD_003765 SSU ribosomal protein S15p (S13e) K02956 RP-S15; small subunit ribosomal protein S15
D VCD_001045 SSU ribosomal protein S16p K02959 RP-S16; small subunit ribosomal protein S16
D VCD_001776 SSU ribosomal protein S17p (S11e) K02961 RP-S17; small subunit ribosomal protein S17
D VCD_001256 SSU ribosomal protein S18p K02963 RP-S18; small subunit ribosomal protein S18
D VCD_001771 SSU ribosomal protein S19p (S15e) K02965 RP-S19; small subunit ribosomal protein S19
D VCD_003641 SSU ribosomal protein S20p K02968 RP-S20; small subunit ribosomal protein S20
D VCD_001085 SSU ribosomal protein S21p K02970 RP-S21; small subunit ribosomal protein S21
D VCD_001299 LSU ribosomal protein L1p (L10Ae) K02863 RP-L1; large subunit ribosomal protein L1
D VCD_001770 LSU ribosomal protein L2p (L8e) K02886 RP-L2; large subunit ribosomal protein L2
D VCD_001767 LSU ribosomal protein L3p (L3e) K02906 RP-L3; large subunit ribosomal protein L3
D VCD_001768 LSU ribosomal protein L4p (L1e) K02926 RP-L4; large subunit ribosomal protein L4
D VCD_001779 LSU ribosomal protein L5p (L11e) K02931 RP-L5; large subunit ribosomal protein L5
D VCD_001782 LSU ribosomal protein L6p (L9e) K02933 RP-L6; large subunit ribosomal protein L6
D VCD_001255 LSU ribosomal protein L9p K02939 RP-L9; large subunit ribosomal protein L9
D VCD_001298 LSU ribosomal protein L10p (P0) K02864 RP-L10; large subunit ribosomal protein L10
D VCD_001300 LSU ribosomal protein L11p (L12e) K02867 RP-L11; large subunit ribosomal protein L11
D VCD_001297 LSU ribosomal protein L7/L12 (L23e) K02935 RP-L7; large subunit ribosomal protein L7/L12
D VCD_001037 LSU ribosomal protein L13p (L13Ae) K02871 RP-L13; large subunit ribosomal protein L13
D VCD_001777 LSU ribosomal protein L14p (L23e) K02874 RP-L14; large subunit ribosomal protein L14
D VCD_001786 LSU ribosomal protein L15p (L27Ae) K02876 RP-L15; large subunit ribosomal protein L15
D VCD_001774 LSU ribosomal protein L16p (L10e) K02878 RP-L16; large subunit ribosomal protein L16
D VCD_001793 LSU ribosomal protein L17p K02879 RP-L17; large subunit ribosomal protein L17
D VCD_001783 LSU ribosomal protein L18p (L5e) K02881 RP-L18; large subunit ribosomal protein L18
D VCD_001042 LSU ribosomal protein L19p K02884 RP-L19; large subunit ribosomal protein L19
D VCD_000985 LSU ribosomal protein L20p K02887 RP-L20; large subunit ribosomal protein L20
D VCD_001171 LSU ribosomal protein L21p K02888 RP-L21; large subunit ribosomal protein L21
D VCD_001772 LSU ribosomal protein L22p (L17e) K02890 RP-L22; large subunit ribosomal protein L22
D VCD_001769 LSU ribosomal protein L23p (L23Ae) K02892 RP-L23; large subunit ribosomal protein L23
D VCD_001778 LSU ribosomal protein L24p (L26e) K02895 RP-L24; large subunit ribosomal protein L24
D VCD_001170 LSU ribosomal protein L27p K02899 RP-L27; large subunit ribosomal protein L27
D VCD_001398 LSU ribosomal protein L28p K02902 RP-L28; large subunit ribosomal protein L28
D VCD_001775 LSU ribosomal protein L29p (L35e) K02904 RP-L29; large subunit ribosomal protein L29
D VCD_001785 LSU ribosomal protein L30p (L7e) K02907 RP-L30; large subunit ribosomal protein L30
D VCD_001688 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D VCD_003453 LSU ribosomal protein L31p K02909 RP-L31; large subunit ribosomal protein L31
D VCD_002342 LSU ribosomal protein L32p K02911 RP-L32; large subunit ribosomal protein L32
D VCD_001397 LSU ribosomal protein L33p K02913 RP-L33; large subunit ribosomal protein L33
D VCD_001476 LSU ribosomal protein L34p K02914 RP-L34; large subunit ribosomal protein L34
D VCD_000986 LSU ribosomal protein L35p K02916 RP-L35; large subunit ribosomal protein L35
D VCD_001788 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D VCD_003452 LSU ribosomal protein L36p K02919 RP-L36; large subunit ribosomal protein L36
D VCD_002735 LSU ribosomal protein L25p K02897 RP-L25; large subunit ribosomal protein L25
D VCD_rna024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna063 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna054 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna043 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna079 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna072 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna115 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna081 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna059 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna066 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna029 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna118 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna075 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna047 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna116 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna071 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna062 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna078 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna055 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna044 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:vcj03009]
D VCD_001893 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VCD_001282 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D VCD_001894 GTP-binding protein Era K03595 era; GTPase
D VCD_001169 GTP-binding protein Obg K03979 obgE; GTPase [EC:3.6.5.-]
D VCD_003811 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
D VCD_003769 transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D VCD_002075 transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
D VCD_001301 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D VCD_002740 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D VCD_001163 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D VCD_001513 ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D VCD_003787 ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D VCD_001603 ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D VCD_001137 ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D VCD_002872 ribosomal RNA small subunit methyltransferase F K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D VCD_001470 ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VCD_001944 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D VCD_001026 tetrapyrrole (Corrin-Porphyrin) methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D VCD_001541 SAM-dependent methyltransferase K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D VCD_002364 rRNA (guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D VCD_001765 23S rRNA (guanosine-2'-O-) -methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D VCD_003775 cell division protein FtsJ/ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D VCD_002762 hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D VCD_002044 ribosomal RNA small subunit methyltransferase C K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D VCD_003385 hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D VCD_002986 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D VCD_001426 hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D VCD_002885 23S rRNA (guanine-N-2-) -methyltransferase RlmL K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D VCD_003569 ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D VCD_001902 23S rRNA (Uracil-5-)-methyltransferase rumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D VCD_000403 RNA methyltransferase TrmA family K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D VCD_001852 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VCD_000140 pseudouridylate synthase LSU rRNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VCD_002710 pseudouridylate synthase LSU rRNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VCD_003164 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D VCD_002339 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D VCD_003613 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D VCD_003202 ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D VCD_002116 ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D VCD_003754 ribosomal-protein-S18p-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D VCD_003027 ribosomal-protein-S5p-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D VCD_002060 ribosomal protein S6 glutaminyl transferase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D VCD_002472 hypothetical protein K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D VCD_001044 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D VCD_001743 ribosomal protein S12p Asp88 methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D VCD_001327 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D VCD_002253 hypothetical protein K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D VCD_002337 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VCD_001203 cytoplasmic axial filament protein CafA and Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D VCD_001140 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D VCD_001799 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D VCD_000519 cold-shock DEAD-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VCD_003659 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D VCD_001283 ribosome small subunit-stimulated GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VCD_003563 GTP-binding protein EngA K03977 engA; GTPase
D VCD_000800 50S ribosomal subunit maturation GTPase RbgA K14540 rbgA; ribosome biogenesis GTPase A
D VCD_001275 GTP-binding protein HflX K03665 hflX; GTPase
D VCD_003261 Sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VCD_001522 Sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VCD_001657 GTP pyrophosphokinase (p)ppGpp synthetase II/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D VCD_003767 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D VCD_003770 clustered with transcription termination protein NusA K09748 rimP; ribosome maturation factor RimP
D VCD_000736 hypothetical protein K14761 rlbA; ribosome-associated protein
D VCD_003384 hypothetical protein K09710 ybeB; ribosome-associated protein
D VCD_003377 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D VCD_003776 RNA binding protein K07574 yhbY; RNA-binding protein
D VCD_000221 hypothetical protein K14762 yibL; ribosome-associated protein
D VCD_001824 hypothetical protein K09889 yjgA; ribosome-associated protein
D VCD_002889 ribosome modulation factor K03812 rmf; ribosome modulation factor
D VCD_001830 ribosome hibernation protein YhbH K05808 hpf; ribosome hibernation promoting factor
D VCD_003616 ribosome hibernation protein YfiA K05809 raiA; ribosome-associated inhibitor A
D VCD_002193 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
D VCD_002341 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:vcj03016]
D VCD_001908 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D VCD_002124 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VCD_003455 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VCD_003638 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VCD_003381 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VCD_003306 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VCD_003341 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VCD_002293 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VCD_003655 lysyl-tRNA synthetase (class II) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VCD_003177 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VCD_001060 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VCD_003562 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VCD_003054 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VCD_000988 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VCD_003232 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VCD_002528 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VCD_001854 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VCD_003566 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VCD_003126 phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VCD_003125 phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VCD_003780 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCD_001141 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCD_001740 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VCD_001627 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D VCD_002465 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VCD_001154 tRNA(m7G46)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D VCD_003454 hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D VCD_003339 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D VCD_003766 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D VCD_001075 tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D VCD_003578 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VCD_003261 Sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VCD_001522 Sua5 YciO YrdC YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VCD_001277 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D VCD_001473 GTPase and tRNA-U34 5-formylation enzyme TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D VCD_001471 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VCD_001645 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D VCD_001475 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D VCD_003332 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D VCD_001406 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D VCD_000518 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D VCD_002384 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D VCD_003623 ABC transporter ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D VCD_001489 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VCD_001488 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VCD_003812 glutamyl-Q-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D VCD_002205 transcriptional regulator K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D VCD_003463 tRNA-specific adenosine-34 deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D VCD_001244 tRNA dihydrouridine synthase A K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D VCD_001329 tRNA dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D VCD_003236 tRNA-dihydrouridine synthase C K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D VCD_003375 tRNA-i(6)A37 methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D VCD_003179 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D VCD_003180 tRNA (5-methoxyuridine) 34 synthase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D VCD_002662 S-adenosylmethionine-dependent methyltransferase functionally coupled to the MukBEF chromosome partitioning mechanism K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D VCD_001611 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D VCD_001043 tRNA (Guanine37-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D VCD_003580 tRNA:Cm32/Um32 methyltransferase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D VCD_000688 hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D VCD_001673 tRNA (cytosine34-2'-O-)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D VCD_003658 predicted O-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D VCD_000281 hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
D VCD_003522 RNA methyltransferase TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D VCD_003444 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D VCD_001852 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VCD_000140 pseudouridylate synthase LSU rRNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VCD_002710 pseudouridylate synthase LSU rRNA-specific K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VCD_003214 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VCD_002914 tRNA(Cytosine32)-2-thiocytidine synthetase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D VCD_001492 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VCD_002212 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VCD_001265 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D VCD_001266 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D VCD_001267 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D VCD_002984 tRNA 2-thiouridine synthesizing protein E K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D VCD_003576 iron binding protein IscA for iron-sulfur cluster assembly K13628 iscA; iron-sulfur cluster assembly protein
D VCD_001883 predicted aminomethyltransferase-like GcvT K06980 ygfZ; tRNA-modifying protein YgfZ
D VCD_002452 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D VCD_002259 5-methylaminomethyl-2-thiouridine-forming enzyme MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D VCD_003586 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D VCD_002975 queuosine Biosynthesis QueC ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VCD_003037 queuosine biosynthesis QueD PTPS-I K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VCD_002976 queuosine Biosynthesis QueE Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VCD_003430 NADPH dependent preQ0 reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VCD_001281 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D VCD_003585 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D VCD_003437 thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VCD_002098 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D VCD_000232 hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D VCD_002379 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D VCD_001084 endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D VCD_001280 ATPase YjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D VCD_002032 molybdopterin biosynthesis MoeB protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D VCD_001764 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VCD_003764 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:vcj03012]
D VCD_000748 translation initiation factor SUI1-related protein K03113 EIF1; translation initiation factor 1
D VCD_003768 translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D VCD_000987 translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D VCD_001755 glutathione-regulated potassium-efflux system ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D VCD_002082 translation elongation factor Ts K02357 tsf; elongation factor Ts
D VCD_001261 translation elongation factor Tu K02358 tuf; elongation factor Tu
D VCD_001303 translation elongation factor Tu K02358 tuf; elongation factor Tu
D VCD_001262 translation elongation factor G K02355 fusA; elongation factor G
D VCD_002006 translation elongation factor G-like protein K02355 fusA; elongation factor G
D VCD_002199 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D VCD_002084 ribosome recycling factor K02838 frr; ribosome recycling factor
D VCD_002200 methylase of polypeptide chain release factor K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D VCD_002194 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D VCD_002643 translation initiation factor 1 K02518 infA; translation initiation factor IF-1
D VCD_001706 translation elongation factor P K02356 efp; elongation factor P
D VCD_003135 translation elongation factor P-related protein K02356 efp; elongation factor P
D VCD_001711 lysyl-tRNA synthetase-related protein K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D VCD_001705 lysine 2,3-aminomutase K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D VCD_002256 hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D VCD_003656 protein chain release factor B K02836 prfB; peptide chain release factor 2
D VCD_003660 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D VCD_000064 hypothetical protein K09890 arfA; alternative ribosome-rescue factor
C 03110 Chaperones and folding catalysts [BR:vcj03110]
D VCD_003198 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D VCD_003611 ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D VCD_002441 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D VCD_001693 ATP-dependent hsl protease ATP-binding subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D VCD_003353 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VCD_003472 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VCD_003574 chaperone protein HscA K04044 hscA; molecular chaperone HscA
D VCD_002959 hypothetical protein K04046 yegD; hypothetical chaperone protein
D VCD_001703 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCD_000504 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCD_003471 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D VCD_001159 hypothetical protein K05801 djlA; DnaJ like chaperone protein
D VCD_003575 chaperone protein HscB K04082 hscB; molecular chaperone HscB
D VCD_001631 heat-shock chaperonin K04083 hslO; molecular chaperone Hsp33
D VCD_003474 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D VCD_001486 heat shock protein A K04080 ibpA; molecular chaperone IbpA
D VCD_001632 ribosome-associated heat shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D VCD_001702 heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D VCD_000505 heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D VCD_001040 outer membrane stress sensor protease DegQ K04771 degP; serine protease Do [EC:3.4.21.107]
D VCD_003774 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VCD_001466 ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VCD_001713 chaperone protein SecB K03071 secB; preprotein translocase subunit SecB
D VCD_001677 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein K06006 cpxP; periplasmic protein CpxP/Spy
D VCD_000197 copper metallochaperone bacterial analog of Cox17 protein K09796 pccA; periplasmic copper chaperone A
D VCD_002659 chaperone protein TorD K03533 torD; TorA specific chaperone
D VCD_001613 alkaline serine exoprotease A precursor K14645 K14645; serine protease [EC:3.4.21.-]
D VCD_000034 cytolysin and hemolysin HlyA Pore-forming toxin K10948 hlyA; hemolysin
D VCD_002121 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VCD_003796 beta-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VCD_002042 peptidyl-prolyl cis-trans isomerase PpiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VCD_002527 peptidyl-prolyl cis-trans isomerase PpiB K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D VCD_002444 peptidyl-prolyl cis-trans isomerase PpiD K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D VCD_001269 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D VCD_001795 FKBP-type peptidyl-prolyl cis-trans isomerase FklB K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D VCD_003636 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D VCD_001759 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D VCD_000381 peptidyl-prolyl cis-trans isomerase PpiC K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D VCD_001161 peptidyl-prolyl cis-trans isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D VCD_001315 thioredoxin K03671 TXN; thioredoxin
D VCD_000568 thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D VCD_003361 thioredoxin domain-containing protein K05838 ybbN; putative thioredoxin
D VCD_003196 glutaredoxin 1 K03674 grxA; glutaredoxin 1
D VCD_000346 glutaredoxin 2 K03675 grxB; glutaredoxin 2
D VCD_002323 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D VCD_001502 periplasmic thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VCD_002460 thiol:disulfide oxidoreductase DsbB required for DsbA reoxidation K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D VCD_001937 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VCD_003697 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VCD_001665 cytochrome c-type biogenesis protein DsbD protein-disulfide reductase K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D VCD_002315 cytochrome c-type biogenesis protein CcmG/DsbE thiol:disulfide oxidoreductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:vcj04131]
D VCD_003570 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VCD_001490 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D VCD_002367 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VCD_000485 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VCD_001121 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCD_000611 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCD_002359 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCD_003353 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:vcj04121]
C 03051 Proteasome [BR:vcj03051]
D VCD_003353 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:vcj03032]
D VCD_001109 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VCD_002106 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VCD_000052 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VCD_001348 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D VCD_002443 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VCD_003123 integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D VCD_002448 integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D VCD_001480 chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D VCD_001253 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VCD_001087 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VCD_003686 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VCD_001226 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VCD_002096 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VCD_001481 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VCD_001855 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VCD_003383 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VCD_002352 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VCD_003060 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_003725 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_001321 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_002107 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_003288 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VCD_003755 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VCD_002095 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D VCD_001570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VCD_003367 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VCD_001737 methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VCD_002271 SeqA protein K03645 seqA; negative modulator of initiation of replication
D VCD_003093 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VCD_001483 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VCD_001925 topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VCD_001924 topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VCD_002649 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VCD_002324 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:vcj03036]
D VCD_000052 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VCD_001893 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VCD_003212 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D VCD_001348 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D VCD_002443 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VCD_003123 integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D VCD_002448 integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D VCD_001480 chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D VCD_001029 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein
D VCD_001597 non-specific DNA-binding protein Dps/ferroxidase K04047 dps; starvation-inducible DNA-binding protein
D VCD_001330 NA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VCD_001276 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D VCD_001123 chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VCD_000274 PutR transcriptional activator of PutA and PutP K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VCD_002458 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VCD_002666 transcriptional regulator AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VCD_002328 nucleoid-associated protein NdpA K06899 ndpA; nucleoid-associated protein
D VCD_002665 chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB
D VCD_002664 chromosome partition protein MukE K03804 mukE; chromosome partition protein MukE
D VCD_002663 chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF
D VCD_001955 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D VCD_001078 cell division protein FtsB K05589 ftsB; cell division protein FtsB
D VCD_001605 cell division transporter ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VCD_001946 cell division protein FtsI (Peptidoglycan synthetase) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VCD_002459 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D VCD_001945 hypothetical protein K03586 ftsL; cell division protein FtsL
D VCD_001954 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D VCD_001951 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D VCD_001606 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VCD_001956 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VCD_003368 cell division protein ZipA K03528 zipA; cell division protein ZipA
D VCD_001878 Z-ring-associated protein ZapA K09888 zapA; cell division protein ZapA
D VCD_001681 hypothetical protein K09892 zapB; cell division protein ZapB
D VCD_002884 hypothetical protein K18657 zapC; cell division protein ZapC
D VCD_001927 hypothetical protein K18778 zapD; cell division protein ZapD
D VCD_001038 hypothetical protein K06916 zapE; cell division protein ZapE
D VCD_001796 hypothetical protein K07269 ytfB; cell division protein YtfB
D VCD_001279 N-acetylmuramoyl-L-alanine amidase AmiB precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VCD_001444 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCD_003420 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCD_002407 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D VCD_002406 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D VCD_002405 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D VCD_003152 superfamily II DNA and RNA helicase K13053 sulA; cell division inhibitor SulA
D VCD_001402 transcriptional regulator K05501 slmA; TetR/AcrR family transcriptional regulator
D VCD_002271 SeqA protein K03645 seqA; negative modulator of initiation of replication
D VCD_001207 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VCD_001206 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D VCD_001205 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D VCD_003387 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D VCD_001469 chromosome (plasmid) partitioning protein ParA/sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D VCD_002305 chromosome (plasmid) partitioning protein ParA/sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D VCD_000229 chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D VCD_001468 chromosome (plasmid) partitioning protein ParB/stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VCD_000230 chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VCD_001925 topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VCD_001924 topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VCD_001471 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VCD_001470 ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VCD_001588 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D VCD_001936 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D VCD_003305 Mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VCD_001571 GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:vcj03400]
D VCD_000323 methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D VCD_000181 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D VCD_002953 deoxyribodipyrimidine photolyase/cryptochrome family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D VCD_001990 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D VCD_001155 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VCD_003327 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VCD_001960 MutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VCD_000147 nudix-related transcriptional regulator NrtR K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VCD_000966 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VCD_000514 hypothetical protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D VCD_000322 3-methyladenine DNA glycosylase K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VCD_002705 DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D VCD_001395 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VCD_002502 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D VCD_001989 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VCD_001938 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VCD_003367 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VCD_001570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VCD_001229 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D VCD_003320 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D VCD_003130 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D VCD_001424 ATP-dependent DNA helicase UvrD/PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VCD_001296 DNA-directed RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VCD_001295 DNA-directed RNA polymerase beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VCD_001792 DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VCD_001658 DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VCD_002475 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VCD_001070 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VCD_001278 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D VCD_003651 DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D VCD_003115 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D VCD_003560 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VCD_003441 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VCD_002096 DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VCD_001481 DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VCD_001855 DNA polymerase III chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VCD_003383 DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VCD_002352 DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VCD_003060 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_003725 DNA polymerase III epsilon subunit-like 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_001321 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_002107 DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VCD_003288 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VCD_003755 DNA polymerase III psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VCD_003686 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VCD_001226 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VCD_001737 methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VCD_002024 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D VCD_002023 exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D VCD_002025 exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VCD_001062 RecA protein K03553 recA; recombination protein RecA
D VCD_002530 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VCD_002531 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VCD_002529 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VCD_001689 helicase PriA essential for oriC/DnaA-independent DNA replication K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VCD_001257 primosomal replication protein N K02686 priB; primosomal replication protein N
D VCD_002519 primosomal replication protein N prime prime K04067 priC; primosomal replication protein N''
D VCD_000806 exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D VCD_000807 exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D VCD_002005 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D VCD_001482 DNA recombination and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D VCD_001656 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VCD_001895 DNA recombination and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VCD_003286 recombination protein RecR K06187 recR; recombination protein RecR
D VCD_003476 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D VCD_003606 DNA recombination-dependent growth factor C K03554 rdgC; recombination associated protein RdgC
D VCD_002739 helicase-related protein K19789 radD; DNA repair protein RadD
D VCD_003093 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VCD_001483 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VCD_002649 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VCD_001348 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D VCD_002443 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VCD_001330 NA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VCD_003123 integration host factor alpha subunit K04764 ihfA; integration host factor subunit alpha
D VCD_002448 integration host factor beta subunit K05788 ihfB; integration host factor subunit beta
D VCD_001419 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VCD_003212 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D VCD_002054 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D VCD_003745 error-prone repair protein UmuC K03502 umuC; DNA polymerase V
D VCD_003726 error-prone repair protein UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D VCD_001559 SOS-response repressor and protease LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D VCD_003132 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D VCD_001061 regulatory protein RecX K03565 recX; regulatory protein
D VCD_001442 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D VCD_000602 DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D VCD_002521 ATP-dependent helicase DinG/Rad3 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VCD_002378 DinG family ATP-dependent helicase YoaA K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VCD_003095 ribonucleotide reductase of class Ia (aerobic) alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VCD_003096 ribonucleotide reductase of class Ia (aerobic) beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:vcj03029]
D VCD_001034 ubiquinol--cytochrome c reductase cytochrome B subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VCD_003768 translation initiation factor 2 K02519 infB; translation initiation factor IF-2
D VCD_000987 translation initiation factor 3 K02520 infC; translation initiation factor IF-3
D VCD_002082 translation elongation factor Ts K02357 tsf; elongation factor Ts
D VCD_001261 translation elongation factor Tu K02358 tuf; elongation factor Tu
D VCD_001303 translation elongation factor Tu K02358 tuf; elongation factor Tu
D VCD_001262 translation elongation factor G K02355 fusA; elongation factor G
D VCD_002006 translation elongation factor G-like protein K02355 fusA; elongation factor G
D VCD_001894 GTP-binding protein Era K03595 era; GTPase
D VCD_003780 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCD_001141 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VCD_003381 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VCD_003177 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VCD_002293 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VCD_003686 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VCD_001226 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D VCD_002089 outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D VCD_003472 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VCD_003474 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D VCD_001703 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCD_000504 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCD_001702 heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D VCD_000505 heat shock protein 60 family co-chaperone GroES K04078 groES; chaperonin GroES
D VCD_003471 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D VCD_003578 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VCD_003575 chaperone protein HscB K04082 hscB; molecular chaperone HscB
D VCD_002323 glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin
D VCD_003305 Mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VCD_001474 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VCD_000196 hypothetical protein K07152 SCO1; protein SCO1
D VCD_003353 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:vcj02000]
D VCD_002483 lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VCD_002898 RTX toxin transporter K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D VCD_002900 hypothetical protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D VCD_000342 ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VCD_001416 hypothetical protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VCD_000259 ABC transporter transmembrane region K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VCD_003163 transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D VCD_003162 transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D VCD_002887 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D VCD_001067 sulfate and thiosulfate binding protein CysP K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D VCD_000881 sulfate-binding protein sbp K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D VCD_001066 sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D VCD_001065 sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D VCD_001064 sulfate and thiosulfate import ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D VCD_000593 molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D VCD_000594 molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D VCD_000595 molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VCD_002852 ABC-type tungstate transport system binding protein K05772 tupA; tungstate transport system substrate-binding protein
D VCD_002851 ABC-type tungstate transport system permease protein K05773 tupB; tungstate transport system permease protein
D VCD_002850 ABC-type tungstate transport system ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D VCD_003801 ferric iron ABC transporter iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VCD_000716 ABC transporter of unknown compound (not Fe3+) substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VCD_000640 ABC transporter of unknown compound (not Fe3+) substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VCD_003800 iron(III) ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein
D VCD_000718 ABC transporter of unknown compound (not Fe3+) permease protein K02011 afuB; iron(III) transport system permease protein
D VCD_000639 ABC transporter of unknown compound (not Fe3+) permease protein K02011 afuB; iron(III) transport system permease protein
D VCD_000638 ABC transporter of unknown compound (not Fe3+) ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VCD_003799 ferric iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VCD_000717 ABC transporter of unknown compound (not Fe3+) ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VCD_001821 thiamin ABC transporter substrate-binding component K02064 thiB; thiamine transport system substrate-binding protein
D VCD_001822 thiamin ABC transporter transmembrane component K02063 thiP; thiamine transport system permease protein
D VCD_001823 thiamin ABC transporter ATPase component K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D VCD_002921 ABC transporter periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCD_002922 putrescine ABC transporter putrescine-binding protein PotF K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCD_003618 hypothetical protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCD_000231 ABC transporter periplasmic spermidine putrescine-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VCD_002920 spermidine putrescine ABC transporter permease component PotC K11070 potC; spermidine/putrescine transport system permease protein
D VCD_002919 spermidine putrescine ABC transporter permease component PotB K11071 potB; spermidine/putrescine transport system permease protein
D VCD_002918 spermidine putrescine transport ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D VCD_002714 ABC transporter substrate-binding protein YnjB K05777 ynjB; putative thiamine transport system substrate-binding protein
D VCD_002713 ABC transporter permease protein YnjC K05778 ynjC; putative thiamine transport system permease protein
D VCD_002712 ABC transporter ATP-binding protein YnjD K05779 ynjD; putative thiamine transport system ATP-binding protein
D VCD_000389 maltose/maltodextrin ABC transporter substrate binding periplasmic protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VCD_000390 maltose/maltodextrin ABC transporter permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D VCD_000391 maltose/maltodextrin ABC transporter permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D VCD_000388 maltose/maltodextrin transport ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VCD_000307 N-Acetyl-D-glucosamine ABC transport system sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D VCD_003012 galactose/methyl galactoside ABC transport system D-galactose-binding MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein
D VCD_003010 galactose/methyl galactoside ABC transport system permease protein MglC K10541 mglC; methyl-galactoside transport system permease protein
D VCD_003011 galactose/methyl galactoside ABC transport system ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D VCD_000116 ribose ABC transport system ribose-binding protein RbsB K10439 rbsB; ribose transport system substrate-binding protein
D VCD_000117 ribose ABC transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D VCD_000118 ribose ABC transport system ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VCD_002826 glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D VCD_002825 SN-glycerol-3-phosphate transport system permease protein UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D VCD_002824 SN-glycerol-3-phosphate transport system permease protein UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D VCD_002823 SN-glycerol-3-phosphate transport ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D VCD_001840 uncharacterized ABC transporter, periplasmic component YrbD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VCD_001839 uncharacterized ABC transporter permease component YrbE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VCD_001838 uncharacterized ABC transporter ATP-binding protein YrbF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VCD_001841 uncharacterized ABC transporter auxiliary component YrbC K07323 mlaC; phospholipid transport system substrate-binding protein
D VCD_001842 hypothetical protein K07122 mlaB; phospholipid transport system transporter-binding protein
D VCD_000170 phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VCD_003603 phosphate ABC transporter, periplasmic phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D VCD_000516 ABC-type phosphate transport system periplasmic component K02040 pstS; phosphate transport system substrate-binding protein
D VCD_000169 phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VCD_003600 phosphate transport system permease protein PstC K02037 pstC; phosphate transport system permease protein
D VCD_000168 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VCD_003599 phosphate transport system permease protein PstA K02038 pstA; phosphate transport system permease protein
D VCD_000167 phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VCD_003598 phosphate transport ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VCD_000561 arginine ABC transporter periplasmic arginine-binding protein ArtI K09997 artI; arginine transport system substrate-binding protein
D VCD_000563 arginine ABC transporter permease protein ArtM K09998 artM; arginine transport system permease protein
D VCD_000562 arginine ABC transporter permease protein ArtQ K09999 artQ; arginine transport system permease protein
D VCD_000560 arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D VCD_002979 amino acid ABC transporter amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D VCD_002980 amino acid ABC transporter permease protein K09970 aapQ; general L-amino acid transport system permease protein
D VCD_002981 amino acid ABC transporter permease protein K09971 aapM; general L-amino acid transport system permease protein
D VCD_002982 ABC-type polar amino acid transport system ATPase component K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VCD_002499 amino acid ABC transporter amino acid-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D VCD_002501 amino acid ABC transporter permease protein K10023 aotM; arginine/ornithine transport system permease protein
D VCD_002500 arginine/ornithine ABC transporter permease protein AotQ K10024 aotQ; arginine/ornithine transport system permease protein
D VCD_002498 arginine/ornithine ABC transporter ATP-binding protein AotP K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D VCD_003427 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D VCD_003426 methionine ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D VCD_003425 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D VCD_003240 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D VCD_003239 ABC-type uncharacterized transport system permease component K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D VCD_003238 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D VCD_001479 amino acid ABC transporter amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D VCD_001478 amino acid ABC transporter permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D VCD_001477 ABC-type polar amino acid transport system ATPase component K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D VCD_000360 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VCD_002778 ABC transporter substrate-binding protein-related protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VCD_000734 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VCD_001741 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VCD_000301 amino acid ABC transporter amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VCD_000357 hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VCD_000300 amino acid ABC transporter permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VCD_000302 amino acid ABC transporter permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VCD_000303 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VCD_003250 oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D VCD_003249 oligopeptide transport system permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D VCD_003248 oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D VCD_003247 oligopeptide transport ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D VCD_000361 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VCD_003246 oligopeptide transport ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D VCD_002697 peptide transport periplasmic protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein
D VCD_002696 peptide transport system permease protein SapB K19227 sapB; cationic peptide transport system permease protein
D VCD_002695 peptide transport system permease protein SapC K19228 sapC; cationic peptide transport system permease protein
D VCD_002694 peptide transport system ATP-binding protein SapD K19229 sapD; cationic peptide transport system ATP-binding protein
D VCD_002693 peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D VCD_003789 (GlcNAc)2 ABC transporter: substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VCD_000245 oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VCD_001439 peptide ABC transporter peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VCD_003790 peptide ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VCD_000244 ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VCD_001438 peptide ABC transporter permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VCD_003791 peptide ABC transporter permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VCD_000243 dipeptide transport system permease protein DppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VCD_001437 peptide ABC transporter permease component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VCD_003792 (GlcNAc)2 ABC transporter ATP-binding component 1 K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VCD_001440 cell division transporter ATP-binding protein FtsE K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VCD_000242 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VCD_003793 (GlcNAc)2 ABC transporter ATP-binding component 2 K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VCD_000726 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein
D VCD_000727 oligopeptide transport system permease protein OppB K13894 yejB; microcin C transport system permease protein
D VCD_000728 oligopeptide transport system permease protein OppC K13895 yejE; microcin C transport system permease protein
D VCD_000729 hypothetical protein K13896 yejF; microcin C transport system ATP-binding protein
D VCD_001413 ferrichrome-binding periplasmic protein precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D VCD_001412 ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D VCD_001414 ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D VCD_000418 periplasmic hemin-binding protein K25132 hmuT; heme transport system substrate-binding protein
D VCD_000417 hemin ABC transporter permease protein K25133 hmuU; heme transport system permease protein
D VCD_000416 ABC-type hemin transport system ATPase component K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D VCD_003550 ferric vibriobactin enterobactin transport system substrate-binding protein ViuP K23185 fepB; ferric enterobactin transport system substrate-binding protein
D VCD_003549 ferric vibriobactin enterobactin transport system permease protein ViuD K23186 fepD; iron-siderophore transport system permease protein
D VCD_003548 ferric vibriobactin enterobactin transport system permease protein ViuG K23187 fepG; iron-siderophore transport system permease protein
D VCD_003546 ferric vibriobactin enterobactin transport system ATP-binding protein ViuC K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D VCD_000027 ferric vibriobactin enterobactin transport system substrate-binding protein VctP K25282 yclQ; iron-siderophore transport system substrate-binding protein
D VCD_000025 ferric vibriobactin enterobactin transport system permease protein VctG K25283 yclO; iron-siderophore transport system permease protein
D VCD_000026 ferric vibriobactin enterobactin transport system permease protein VctD K25284 yclN; iron-siderophore transport system permease protein
D VCD_000024 ferric vibriobactin enterobactin transport system ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D VCD_001970 vitamin B12 ABC transporter B12-binding component BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein
D VCD_003106 vitamin B12 ABC transporter permease component BtuC K06073 btuC; vitamin B12 transport system permease protein
D VCD_003105 vitamin B12 ABC transporter ATPase component BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D VCD_002286 zinc ABC transporter-binding protein ZnuA K09815 znuA; zinc transport system substrate-binding protein
D VCD_002284 hypothetical protein K09816 znuB; zinc transport system permease protein
D VCD_002285 zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VCD_001371 O-antigen export system permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D VCD_001370 O-antigen export system ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D VCD_001857 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein
D VCD_001858 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein
D VCD_001832 lipopolysaccharide ABC transporter ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VCD_002477 lipoprotein releasing system transmembrane protein LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D VCD_002479 lipoprotein releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D VCD_002478 lipoprotein releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VCD_002312 cytochrome c-type biogenesis protein CcmD interacts with CcmCE K02196 ccmD; heme exporter protein D
D VCD_002311 cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C
D VCD_002310 ABC transporter involved in cytochrome c biogenesis CcmB subunit K02194 ccmB; heme exporter protein B
D VCD_002309 ABC transporter involved in cytochrome c biogenesis ATPase component CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D VCD_001606 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VCD_001605 cell division transporter ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VCD_001020 ABC-type multidrug transport system permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D VCD_002768 ABC-type multidrug transport system permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D VCD_002767 ABC-type multidrug transport system permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D VCD_002718 ABC-type multidrug transport system permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D VCD_002719 ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VCD_001021 ABC-type multidrug transport system ATPase component K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VCD_001808 ABC-type antimicrobial peptide transport system permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D VCD_002746 ABC-type antimicrobial peptide transport system permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D VCD_002809 ABC-type antimicrobial peptide transport system permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D VCD_002810 ABC-type antimicrobial peptide transport system permease component K02004 ABC.CD.P; putative ABC transport system permease protein
D VCD_000475 lipoprotein releasing system transmembrane protein LolC K02004 ABC.CD.P; putative ABC transport system permease protein
D VCD_000541 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VCD_002808 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VCD_001809 ABC-type antimicrobial peptide transport system ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VCD_002745 ABC-type antimicrobial peptide transport system ATPase component K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VCD_000474 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VCD_000540 hypothetical protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VCD_001286 transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VCD_000208 di-and tricarboxylate transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VCD_003022 transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VCD_003645 sodium-dependent phosphate transporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D VCD_002835 multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux pump K26939 norM; MATE family, multidrug efflux pump
D VCD_001696 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D VCD_000349 Na+-driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D VCD_001557 DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D VCD_002744 Na+ driven multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D VCD_003761 multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux pump K26937 dinF; MATE family, multidrug efflux pump
D VCD_003090 sugar efflux transporter B K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D VCD_000773 oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D VCD_001319 hypothetical protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D VCD_000108 glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D VCD_000612 phosphoglycerate transporter protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VCD_000641 hexose phosphate uptake regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VCD_003269 permease K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D VCD_002041 AmpG permease K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D VCD_003740 florfenicol/chloramphenicol resistance protein K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D VCD_003738 TetA K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D VCD_002741 permease K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D VCD_001537 hypothetical protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D VCD_000039 multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D VCD_002935 hypothetical protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D VCD_002758 permease K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D VCD_000567 permease K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D VCD_003372 phosphoenolpyruvate-protein phosphotransferase of PTS system K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VCD_003649 phosphocarrier protein kinase/phosphorylase nitrogen regulation associated K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D VCD_003371 phosphocarrier protein of PTS system K02784 ptsH; phosphocarrier protein HPr
D VCD_001827 phosphocarrier protein nitrogen regulation associated K08485 ptsO; phosphocarrier protein NPr
D VCD_000809 fructose-specific phosphocarrier protein HPr/PTS system fructose-specific IIA component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D VCD_003373 PTS system glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VCD_002354 PTS system glucose-specific IIB component/PTS system glucose-specific IIC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VCD_003343 PTS system N-acetylglucosamine-specific IIB component/PTS system N-acetylglucosamine-specific IIC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VCD_000669 PTS system sucrose-specific IIB component/PTS system sucrose-specific IIC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D VCD_003422 PTS system trehalose-specific IIB component/PTS system trehalose-specific IIC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VCD_001409 PTS system N-acetylmuramic acid-specific IIB component/PTS system N-acetylmuramic acid-specific IIC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VCD_002554 phosphotransferase system mannitol/fructose-specific IIA domain protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VCD_000811 PTS system fructose-specific IIB component/PTS system fructose-specific IIC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VCD_002551 PTS system fructose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VCD_002552 PTS system fructose-specific IIA component/PTS system fructose-specific IIB component/PTS system fructose-specific IIC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D VCD_002553 PTS system fructose-specific IIBC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D VCD_000295 PTS system mannitol-specific IIC component/PTS system mannitol-specific IIB component/PTS system mannitol-specific IIA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VCD_003067 PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VCD_003069 PTS system cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VCD_003068 PTS system cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VCD_000009 PTS system 3-keto-L-gulonate/L-ascorbate specific IIA component (PtxA) K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VCD_000008 PTS system 3-keto-L-gulonate/L-ascorbate specific IIC component (SgaT) K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VCD_001829 PTS system nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VCD_002550 hypothetical protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VCD_000574 glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D VCD_000055 potassium voltage-gated channel subfamily KQT K10716 kch; voltage-gated potassium channel
D VCD_003802 ammonium transporter K03320 amt; ammonium transporter, Amt family
D VCD_001032 stringent starvation protein A K03599 sspA; stringent starvation protein A
D VCD_000078 protein BatA K07114 yfbK; Ca-activated chloride channel homolog
D VCD_000079 TPR domain protein in aerotolerance operon K07114 yfbK; Ca-activated chloride channel homolog
D VCD_002983 hypothetical protein K19416 yccA; modulator of FtsH protease
D VCD_002683 formate efflux transporter K06212 focA; formate transporter
D VCD_000787 formate efflux transporter K06212 focA; formate transporter
D VCD_000708 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D VCD_002632 small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D VCD_001125 hypothetical protein K03442 mscS; small conductance mechanosensitive channel
D VCD_001356 hypothetical protein K16053 ybdG; miniconductance mechanosensitive channel
D VCD_001826 magnesium transporter K06213 mgtE; magnesium transporter
D VCD_002723 magnesium transporter K06213 mgtE; magnesium transporter
D VCD_000506 hypothetical protein K06213 mgtE; magnesium transporter
D VCD_003440 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VCD_003439 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D VCD_001762 sodium-type polar flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VCD_003330 sodium-type flagellar protein MotY precursor K21218 motY; sodium-type flagellar protein MotY
D VCD_002828 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D VCD_002829 ferric siderophore transport system biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D VCD_000420 ferric siderophore transport system biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D VCD_002830 biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D VCD_002537 MotA/TolQ/ExbB proton channel family protein K03562 tolQ; biopolymer transport protein TolQ
D VCD_002538 Tol biopolymer transport system TolR protein K03560 tolR; biopolymer transport protein TolR
D VCD_002014 Mg2+ and Co2+ transporter K16074 zntB; zinc transporter
D VCD_001528 CrbC-like protein K06199 crcB; fluoride exporter
D VCD_000489 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VCD_001350 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VCD_001048 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VCD_003778 outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VCD_002522 outer membrane protein OmpT K10940 ompT; outer membrane protein OmpT
D VCD_000313 maltoporin K02024 lamB; maltoporin
D VCD_002125 outer membrane protein A precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VCD_003299 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VCD_003300 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VCD_000469 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VCD_002037 outer membrane protein OmpK K05517 tsx; nucleoside-specific channel-forming protein
D VCD_001612 outer membrane vitamin B12 receptor BtuB K16092 btuB; vitamin B12 transporter
D VCD_001130 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D VCD_000696 hypothetical protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VCD_000022 enterobactin receptor VctA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VCD_000742 TonB-dependent heme and hemoglobin receptor HutA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VCD_000175 TonB-dependent heme receptor HutR K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VCD_001415 ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VCD_002127 ferric vibriobactin receptor ViuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VCD_001919 type I secretion TolC precursor K12340 tolC; outer membrane protein
D VCD_002811 outer membrane protein K12340 tolC; outer membrane protein
D VCD_002754 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VCD_003399 Capsular polysaccharide synthesis enzyme CpsC polysaccharide export K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D VCD_002089 outer membrane protein assembly factor YaeT precursor K07277 SAM50; outer membrane protein insertion porin family
D VCD_003564 YfgL protein K17713 bamB; outer membrane protein assembly factor BamB
D VCD_002218 NlpB lipoprotein component of the protein assembly complex K07287 bamC; outer membrane protein assembly factor BamC
D VCD_003614 hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D VCD_003477 lipoprotein SmpA a component of the essential YaeT outer-membrane protein assembly complex K06186 bamE; outer membrane protein assembly factor BamE
D VCD_001814 uncharacterized protein YtfM precursor K07278 tamA; translocation and assembly module TamA
D VCD_001815 uncharacterized protein YtfN K09800 tamB; translocation and assembly module TamB
D VCD_001833 LptA protein K09774 lptA; lipopolysaccharide export system protein LptA
D VCD_001834 YrbK protein K11719 lptC; lipopolysaccharide export system protein LptC
D VCD_001160 Imp required for envelope biogenesis/organic solvent tolerance protein precursor K04744 lptD; LPS-assembly protein
D VCD_003382 LPS-assembly lipoprotein RlpB precursor K03643 lptE; LPS-assembly lipoprotein
D VCD_003400 Capsular polysaccharide synthesis enzyme CpsB K20920 vpsM; polysaccharide biosynthesis protein VpsM
D VCD_000034 cytolysin and hemolysin HlyA Pore-forming toxin K10948 hlyA; hemolysin
D VCD_003378 magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D VCD_003116 hypothetical protein K06518 cidA; holin-like protein
D VCD_002266 Holin-like protein CidA K06518 cidA; holin-like protein
D VCD_000278 putrescine/proton symporter putrescine/ornithine antiporter PotE K03756 potE; putrescine:ornithine antiporter
D VCD_001341 lysine/cadaverine antiporter membrane protein CadB K03757 cadB; cadaverine:lysine antiporter
D VCD_000482 amino acid transporter K16263 yjeH; amino acid efflux transporter
D VCD_003734 cobalt-zinc-cadmium resistance protein czcD K16264 czcD; cobalt-zinc-cadmium efflux system protein
D VCD_001678 cobalt-zinc-cadmium resistance protein K13283 fieF; ferrous-iron efflux pump FieF
D VCD_001445 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D VCD_003782 RND multidrug efflux transporter K18989 vexF; multidrug efflux pump
D VCD_002952 molecular chaperone SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D VCD_003025 integral membrane protein K11939 rhtA; inner membrane transporter RhtA
D VCD_001420 RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D VCD_003333 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D VCD_001334 low-affinity gluconate/H+ symporter GntU K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D VCD_000427 hypothetical protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D VCD_001669 C4-dicarboxylate transporter anaerobic K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D VCD_000046 C4-dicarboxylate like transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D VCD_000355 L-lactate permease K03303 lutP; lactate permease
D VCD_001837 YrbG protein K07301 yrbG; cation:H+ antiporter
D VCD_000271 proline/sodium symporter PutP K11928 putP; sodium/proline symporter
D VCD_001661 sodium:solute symporter family protein K14393 actP; cation/acetate symporter
D VCD_000198 sodium/dicarboxylate symporter K07862 sstT; serine/threonine transporter
D VCD_000193 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D VCD_002748 Na+/H+ antiporter NhaA type K03313 nhaA; Na+:H+ antiporter, NhaA family
D VCD_002461 Na+/H+-exchanging protein K03314 nhaB; Na+:H+ antiporter, NhaB family
D VCD_002330 Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D VCD_003211 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D VCD_000040 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D VCD_001663 hypothetical protein K11105 cvrA; potassium/hydrogen antiporter
D VCD_001234 hypothetical protein K03316 nhaP; Na+:H+ antiporter
D VCD_001757 glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D VCD_001756 glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D VCD_001452 potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VCD_001511 potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VCD_001512 Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D VCD_002206 xanthine/uracil permease K02824 uraA; uracil permease
D VCD_001655 xanthine/uracil permease protein K16345 xanP; xanthine permease XanP
D VCD_002064 xanthine/uracil/thiamine/ascorbate permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D VCD_000549 tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D VCD_000087 tryptophan-specific transport protein K03835 mtr; tryptophan-specific transport protein
D VCD_003035 serine transporter K03837 sdaC; serine transporter
D VCD_002721 serine transporter K03837 sdaC; serine transporter
D VCD_002397 hypothetical protein K05782 benE; benzoate membrane transport protein
D VCD_000802 H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D VCD_002009 chromate transport protein ChrA K07240 chrA; chromate transporter
D VCD_000163 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D VCD_001022 sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D VCD_002336 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D VCD_002434 TRAP-type C4-dicarboxylate transport system component K11688 dctP; C4-dicarboxylate-binding protein DctP
D VCD_002435 TRAP-type C4-dicarboxylate transport system small permease component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D VCD_002436 TRAP-type C4-dicarboxylate transport system large permease component K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D VCD_000659 anaerobic C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D VCD_000090 Na(+) H(+) antiporter subunit A/Na(+) H(+) antiporter subunit B K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D VCD_000091 Na(+) H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D VCD_000092 Na(+) H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D VCD_000093 Na(+) H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D VCD_000094 Na(+) H(+) antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D VCD_000095 Na(+) H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D VCD_003640 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D VCD_000209 transporter K13936 mdcF; malonate transporter and related proteins
D VCD_003119 membrane protein K24180 mleP; malate permease and related proteins
D VCD_000799 Kup system potassium uptake protein K03549 kup; KUP system potassium uptake protein
D VCD_001124 lysine efflux permease K06895 lysE; L-lysine exporter family protein LysE/ArgO
D VCD_001595 hypothetical protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VCD_002423 hypothetical protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VCD_001423 threonine efflux protein K05835 rhtC; threonine efflux protein
D VCD_000483 hypothetical protein K05835 rhtC; threonine efflux protein
D VCD_000336 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D VCD_000335 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D VCD_003007 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D VCD_003006 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D VCD_003005 hypothetical protein K07795 tctC; putative tricarboxylic transport membrane protein
D VCD_002213 hypothetical protein K03548 perM; putative permease
D VCD_001660 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D VCD_002332 hypothetical protein K05595 marC; multiple antibiotic resistance protein
D VCD_001951 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D VCD_001490 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D VCD_002831 ferric siderophore transport system binding protein TonB K03832 tonB; periplasmic protein TonB
D VCD_000421 ferric siderophore transport system binding protein TonB K03832 tonB; periplasmic protein TonB
D VCD_002541 peptidoglycan-associated outer membrane lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D VCD_002539 TolA protein K03646 tolA; colicin import membrane protein
D VCD_002540 TolB protein precursor K03641 tolB; TolB protein
D VCD_003533 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCD_001054 oxaloacetate decarboxylase beta chain K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VCD_003532 oxaloacetate decarboxylase alpha chain K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VCD_001055 oxaloacetate decarboxylase alpha chain K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VCD_003531 oxaloacetate decarboxylase gamma chain K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VCD_001056 oxaloacetate decarboxylase gamma chain K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VCD_002686 trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VCD_002685 cytochrome c-type protein TorY K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VCD_002659 chaperone protein TorD K03533 torD; TorA specific chaperone
D VCD_002413 cytochrome c-type protein TorY K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D VCD_002414 biotin sulfoxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VCD_002936 hypothetical protein K03543 emrA; membrane fusion protein, multidrug efflux system
D VCD_002899 membrane-fusion protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D VCD_000262 ABC-type protease exporter membrane fusion protein (MFP) family component PrtE/AprE K12542 lapC; membrane fusion protein, adhesin transport system
D VCD_002628 hypothetical protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D VCD_001444 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCD_003420 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCD_003783 membrane-fusion protein K18990 vexE; membrane fusion protein, multidrug efflux system
D VCD_003398 Capsular polysaccharide synthesis enzyme CpsD exopolysaccharide synthesis K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VCD_002289 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D VCD_002290 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D VCD_002291 ferrous iron transport protein C K10123 feoC; putative ferrous iron transport protein C
D VCD_001546 universal stress protein B K06144 uspB; universal stress protein B
D VCD_002314 cytochrome c heme lyase subunit CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D VCD_003018 outer membrane protein OmpV K07274 mipA; MipA family protein
C 02044 Secretion system [BR:vcj02044]
D VCD_001919 type I secretion TolC precursor K12340 tolC; outer membrane protein
D VCD_002811 outer membrane protein K12340 tolC; outer membrane protein
D VCD_002898 RTX toxin transporter K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D VCD_002900 hypothetical protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D VCD_002899 membrane-fusion protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D VCD_000259 ABC transporter transmembrane region K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VCD_000262 ABC-type protease exporter membrane fusion protein (MFP) family component PrtE/AprE K12542 lapC; membrane fusion protein, adhesin transport system
D VCD_002754 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VCD_001909 general secretion pathway protein A K02450 gspA; general secretion pathway protein A
D VCD_001910 general secretion pathway protein B K02451 gspB; general secretion pathway protein B
D VCD_001633 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VCD_001634 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D VCD_001635 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VCD_001636 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VCD_001637 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VCD_001638 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VCD_001639 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VCD_001640 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VCD_001641 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VCD_001642 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VCD_001643 general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D VCD_001644 general secretion pathway protein N K02463 gspN; general secretion pathway protein N
D VCD_001929 leader peptidase (Prepilin peptidase)/N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VCD_001932 type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D VCD_001931 type 4 fimbrial assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D VCD_001930 type 4 fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D VCD_003470 type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
D VCD_002764 type IV pilus (Tfp) assembly protein PilF K02656 pilF; type IV pilus assembly protein PilF
D VCD_001729 type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D VCD_001730 type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D VCD_001731 type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D VCD_001732 type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D VCD_001733 type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D VCD_001145 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D VCD_003466 type 4 fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
D VCD_003468 type 4 fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D VCD_003469 type 4 fimbrial biogenesis protein FimT K08084 fimT; type IV fimbrial biogenesis protein FimT
D VCD_003340 AAA ATPase K08086 fimV; pilus assembly protein FimV
D VCD_003500 toxin co-regulated pilin A K10930 tcpA; toxin coregulated pilin
D VCD_003499 toxin co-regulated pilus biosynthesis protein B K10931 tcpB; toxin coregulated pilus biosynthesis protein B
D VCD_003497 toxin co-regulated pilus biosynthesis protein C K10932 tcpC; toxin coregulated pilus biosynthesis outer membrane protein C
D VCD_003495 toxin co-regulated pilus biosynthesis protein D K10933 tcpD; toxin coregulated pilus biosynthesis protein D
D VCD_003492 toxin co-regulated pilus biosynthesis protein E anchors TcpT to membrane K10934 tcpE; toxin coregulated pilus biosynthesis protein E
D VCD_003491 toxin co-regulated pilus biosynthesis protein F K10935 tcpF; toxin coregulated pilus biosynthesis protein F
D VCD_003501 toxin co-regulated pilus biosynthesis protein H transcriptional activator of ToxT promoter K10919 tcpH; toxin coregulated pilus biosynthesis protein H
D VCD_003503 toxin co-regulated pilus biosynthesis protein I chemoreceptor negative regulator of TcpA K10961 tcpI; toxin coregulated pilus biosynthesis protein I
D VCD_003489 TCP pilin signal peptidase TcpA processing K10966 tcpJ; toxin coregulated pilus biosynthesis protein J [EC:3.4.23.43 2.1.1.-]
D VCD_003502 toxin co-regulated pilus biosynthesis protein P transcriptional activator of ToxT promoter K10920 tcpP; toxin coregulated pilus biosynthesis protein P
D VCD_003498 toxin co-regulated pilus biosynthesis protein Q K10962 tcpQ; toxin coregulated pilus biosynthesis protein Q
D VCD_003496 toxin co-regulated pilus biosynthesis protein R K10963 tcpR; toxin coregulated pilus biosynthesis protein R
D VCD_003494 toxin co-regulated pilus biosynthesis protein S K10964 tcpS; toxin coregulated pilus biosynthesis protein S
D VCD_003493 toxin co-regulated pilus biosynthesis protein T K10965 tcpT; toxin coregulated pilus biosynthesis protein T
D VCD_001214 MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VCD_001215 MSHA pilin protein MshB K10925 mshB; MSHA pilin protein MshB
D VCD_001213 MSHA pilin protein MshC K10926 mshC; MSHA pilin protein MshC
D VCD_001212 MSHA pilin protein MshD K10927 mshD; MSHA pilin protein MshD
D VCD_001218 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D VCD_001216 MSHA biogenesis protein MshF K12277 mshF; MSHA biogenesis protein MshF
D VCD_001217 MSHA biogenesis protein MshG K12278 mshG; MSHA biogenesis protein MshG
D VCD_001224 MSHA biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI
D VCD_001223 MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ
D VCD_001222 MSHA biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK
D VCD_001221 MSHA biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL
D VCD_001220 MSHA biogenesis protein MshM K12283 mshM; MSHA biogenesis protein MshM
D VCD_001219 MSHA biogenesis protein MshN K12284 mshN; MSHA biogenesis protein MshN
D VCD_001209 MSHA biogenesis protein MshP K12286 mshP; MSHA biogenesis protein MshP
D VCD_001208 MSHA biogenesis protein MshQ K12287 mshQ; MSHA biogenesis protein MshQ
D VCD_001148 hypothetical protein K02221 yggT; YggT family protein
D VCD_002445 DNA uptake protein K02237 comEA; competence protein ComEA
D VCD_000487 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D VCD_002482 hypothetical protein K02238 comEC; competence protein ComEC
D VCD_002297 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VCD_002251 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VCD_002238 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VCD_002240 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VCD_002241 flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VCD_002246 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VCD_002247 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D VCD_002248 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VCD_002249 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VCD_002250 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VCD_003667 IncF plasmid conjugative transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG
D VCD_003669 IncF plasmid conjugative transfer pilus assembly protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF
D VCD_003691 IncF plasmid conjugative transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN
D VCD_003692 IncF plasmid conjugative transfer pilus assembly protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU
D VCD_003693 hypothetical protein K12061 traW; conjugal transfer pilus assembly protein TraW
D VCD_003694 signal peptidase I K12062 trbI; conjugal transfer pilin signal peptidase TrbI
D VCD_003696 IncF plasmid conjugative transfer pilus assembly protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC
D VCD_003705 conjugative transfer protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV
D VCD_003706 IncF plasmid conjugative transfer pilus assembly protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB
D VCD_003707 IncF plasmid conjugative transfer pilus assembly protein TraK K12066 traK; conjugal transfer pilus assembly protein TraK
D VCD_003708 hypothetical protein K12067 traE; conjugal transfer pilus assembly protein TraE
D VCD_003709 IncF plasmid conjugative transfer pilus assembly protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL
D VCD_003704 TraA K12069 traA; conjugal transfer pilus assembly protein TraA
D VCD_003714 TraI K12070 traI; conjugal transfer pilus assembly protein TraI
D VCD_003713 TraD K12071 traD; conjugal transfer pilus assembly protein TraD
D VCD_001937 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VCD_003697 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VCD_003668 IncF plasmid conjugative transfer pilus assembly protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH
D VCD_000124 IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D VCD_000129 ImpK/VasF outer membrane protein K11892 impK; type VI secretion system protein ImpK
D VCD_000130 uncharacterized protein ImpJ/VasE K11893 impJ; type VI secretion system protein ImpJ
D VCD_000133 uncharacterized protein ImpH/VasB K11895 impH; type VI secretion system protein ImpH
D VCD_000134 protein ImpG/VasA K11896 impG; type VI secretion system protein ImpG
D VCD_000136 uncharacterized protein ImpC K11900 impC; type VI secretion system protein ImpC
D VCD_000137 uncharacterized protein ImpB K11901 impB; type VI secretion system protein ImpB
D VCD_000216 Hcp protein K11903 hcp; type VI secretion system secreted protein Hcp
D VCD_002932 Hcp protein K11903 hcp; type VI secretion system secreted protein Hcp
D VCD_002931 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VCD_000215 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VCD_000122 VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VCD_000135 hypothetical protein K11905 K11905; type VI secretion system protein
D VCD_000131 type VI secretion lipoprotein/VasD K11906 vasD; type VI secretion system protein VasD
D VCD_000128 ClpB protein K11907 vasG; type VI secretion system protein VasG
D VCD_000125 uncharacterized protein ImpA K11910 vasJ; type VI secretion system protein VasJ
D VCD_000123 type VI secretion-related protein VasL K11911 vasL; type VI secretion system protein VasL
D VCD_000132 uncharacterized protein ImpI/VasC K11894 impI; type VI secretion system protein ImpI
D VCD_000126 type VI secretion protein VasI K11909 vasI; type VI secretion system protein VasI
D VCD_001959 protein export cytoplasm protein SecA ATPase RNA helicase K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VCD_001713 chaperone protein SecB K03071 secB; preprotein translocase subunit SecB
D VCD_003583 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VCD_000632 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VCD_001302 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D VCD_003582 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VCD_000633 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VCD_003771 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D VCD_001787 preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D VCD_001046 signal recognition particle subunit Ffh SRP54 K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VCD_001604 signal recognition particle receptor protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VCD_003584 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D VCD_001474 OxaI/YidC membrane insertion protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VCD_000795 twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VCD_001553 twin-arginine translocation protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D VCD_001554 twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D VCD_001555 twin-arginine translocation protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:vcj02042]
D VCD_000750 enterotoxin A subunit (NAD(+)--diphthamide ADP-ribosyltransferase) K10928 ctxA; cholera enterotoxin subunit A [EC:2.4.2.36]
D VCD_000749 enterotoxin B subunit K10929 ctxB; cholera enterotoxin subunit B
D VCD_000751 zona occludens toxin K10954 zot; zona occludens toxin
D VCD_002022 tellurite resistance protein K11041 eta; exfoliative toxin A/B
D VCD_000034 cytolysin and hemolysin HlyA Pore-forming toxin K10948 hlyA; hemolysin
D VCD_002895 autotransporter adhesin K10953 rtxA; RTX toxin RtxA
D VCD_000489 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VCD_001350 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VCD_001048 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VCD_000752 accessory cholera enterotoxin K10952 ace; accessory cholera enterotoxin
D VCD_001509 hypothetical protein K11068 hlyIII; hemolysin III
D VCD_000035 hemolysin K11018 tlh; thermolabile hemolysin
D VCD_002587 sialidase K23550 nanH; sialidase [EC:3.2.1.18]
D VCD_002727 microbial collagenase secreted K01387 colA; microbial collagenase [EC:3.4.24.3]
C 02022 Two-component system [BR:vcj02022]
D VCD_003604 phosphate regulon sensor protein phoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VCD_003605 phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VCD_001654 osmolarity sensory histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VCD_001653 two-component system response regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D VCD_003017 signal transduction histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VCD_003016 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D VCD_001675 copper sensory histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VCD_001676 copper-sensing two-component system response regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VCD_000239 signal transduction histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VCD_000238 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VCD_000797 osmosensitive K+ channel histidine kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D VCD_000796 DNA-binding response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VCD_000610 sensor protein TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VCD_002660 TorCAD operon transcriptional regulatory protein TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D VCD_001980 aerobic respiration control sensor protein ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VCD_001981 aerobic respiration control protein ArcA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D VCD_002737 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D VCD_000016 transcriptional regulator K02483 K02483; two-component system, OmpR family, response regulator
D VCD_003073 DNA-binding response regulator LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D VCD_000651 nitrate/nitrite sensor protein K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VCD_000652 nitrate/nitrite response regulator protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D VCD_000642 sensor histidine protein kinase UhpB glucose-6-phosphate specific K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D VCD_000643 transcriptional regulatory protein UhpA K20264 fusR; two-component system, NarL family, response regulator FusR
D VCD_001901 BarA sensory histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VCD_003131 BarA-associated response regulator UvrY K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VCD_002724 sensory box sensor histidine kinase/response regulator VieS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VCD_003074 sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D VCD_003534 sensor kinase CitA K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D VCD_003536 transcriptional regulatory protein CitB K07702 dpiA; two-component system, CitB family, response regulator CitB
D VCD_002771 sensor kinase CitA K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D VCD_002772 transcriptional regulatory protein CitB K02475 K02475; two-component system, CitB family, response regulator
D VCD_003627 autolysin sensor kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VCD_003628 hypothetical protein K02477 K02477; two-component system, LytTR family, response regulator
D VCD_001620 nitrogen regulation protein NR(II) K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VCD_001619 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VCD_000614 signal transduction histidine kinase K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VCD_000615 phosphoglycerate transport system transcriptional regulatory protein PgtA K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D VCD_002438 signal transduction histidine kinase regulating C4-dicarboxylate transport system K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VCD_000105 hypothetical protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VCD_000104 C4-dicarboxylate transport transcriptional regulatory protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VCD_002437 C4-dicarboxylate transport transcriptional regulatory protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VCD_002854 signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VCD_003256 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VCD_002303 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_000248 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_002948 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_002301 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_000247 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_002947 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_002950 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_003020 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_003258 chemotaxis protein CheC --inhibitor of MCP methylation K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_002304 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCD_000254 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCD_002944 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCD_002774 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_002136 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_000380 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_002361 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_000584 autoinducer 2 sensor kinase/phosphatase LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VCD_000805 sensor histidine kinase CqsS K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VCD_003318 phosphorelay protein LuxU K10911 luxU; two-component system, phosphorelay protein LuxU
D VCD_003319 regulatory protein LuxO K10912 luxO; two-component system, repressor protein LuxO
D VCD_002235 flagellar sensor histidine kinase FleS K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VCD_002236 sigma-54 dependent response regulator K10943 flrC; two-component system, response regulator FlrC
D VCD_003260 hypothetical protein K20976 hptB; histidine phosphotransfer protein HptB
D VCD_000257 serine phosphatase RsbU regulator of sigma subunit K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
D VCD_003788 chitin catabolic cascade sensor histidine kinase ChiS K19694 chiS; two-component system, sensor histidine kinase ChiS
C 02035 Bacterial motility proteins [BR:vcj02035]
D VCD_002303 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_000248 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_002948 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VCD_002306 CheW domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_002307 positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_000249 positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_000250 positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_002943 positive regulator of CheA protein activity (CheW) K03408 cheW; purine-binding chemotaxis protein CheW
D VCD_001247 chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D VCD_003257 chemotaxis protein CheC --inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D VCD_000253 chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D VCD_002137 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCD_000252 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCD_002946 chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VCD_002304 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCD_000254 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCD_002944 chemotaxis response regulator protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VCD_002301 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_000247 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_002947 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_002950 chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_003020 hypothetical protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_003258 chemotaxis protein CheC --inhibitor of MCP methylation K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VCD_002302 chemotaxis response - phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D VCD_002774 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_002136 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_000380 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_002361 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VCD_001339 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_003053 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000171 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000273 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000284 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000306 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000310 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000222 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000251 methyl-accepting chemotaxis protein III K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000255 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000074 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000364 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001091 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001158 N-acetylglucosamine regulated methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001564 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001400 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001916 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002517 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002840 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_003023 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002464 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002494 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002934 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002940 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002941 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002942 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002951 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002732 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_002214 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_003061 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_003102 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000409 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000467 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000660 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000548 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_001005 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VCD_000350 aerotaxis sensor receptor protein K03776 aer; aerotaxis receptor
D VCD_000664 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VCD_001093 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VCD_002240 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VCD_002241 flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VCD_002242 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D VCD_002247 flagellar biosynthesis protein FliO K02418 fliO; flagellar protein FliO/FliZ
D VCD_002248 flagellar biosynthesis protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VCD_002249 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VCD_002250 flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VCD_002297 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VCD_002251 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VCD_002239 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VCD_002245 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VCD_002246 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VCD_002238 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VCD_002145 flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D VCD_002135 flagellar basal-body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VCD_002144 flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D VCD_002244 flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VCD_001563 flagellar biosynthesis protein FliL K02415 fliL; flagellar protein FliL
D VCD_002237 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VCD_002243 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VCD_002138 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VCD_002139 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VCD_002140 flagellar basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VCD_002142 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D VCD_002143 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VCD_002146 flagellar protein flgJ (peptidoglycan hydrolase) K02395 flgJ; peptidoglycan hydrolase FlgJ
D VCD_002141 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D VCD_002147 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D VCD_002148 flagellar hook-associated protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VCD_002133 flagellar biosynthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D VCD_002130 hypothetical protein K24343 flgT; flagellar H-ring protein FlgT
D VCD_002131 hypothetical protein K24344 flgO; flagellar H-ring protein FlgO
D VCD_002132 hypothetical protein K09860 flgP; outer membrane protein FlgP
D VCD_001762 sodium-type polar flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VCD_003330 sodium-type flagellar protein MotY precursor K21218 motY; sodium-type flagellar protein MotY
D VCD_002227 flagellin protein FlaF K02406 fliC; flagellin
D VCD_002228 flagellin protein FlaD K02406 fliC; flagellin
D VCD_002229 flagellin B K02406 fliC; flagellin
D VCD_002149 flagellin protein FlaC K02406 fliC; flagellin
D VCD_002191 flagellin protein FlaD K02406 fliC; flagellin
D VCD_002231 flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D VCD_002233 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS
D VCD_002300 RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D VCD_003440 Flagellar motor rotation protein MotA K02556 motA; chemotaxis protein MotA
D VCD_003439 Flagellar motor rotation protein MotB K02557 motB; chemotaxis protein MotB
D VCD_002234 flagellar regulatory protein FleQ K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VCD_002235 flagellar sensor histidine kinase FleS K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VCD_002236 sigma-54 dependent response regulator K10943 flrC; two-component system, response regulator FlrC
D VCD_002134 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VCD_002230 flagellin protein FlaG K06603 flaG; flagellar protein FlaG
D VCD_002232 flagellar rod protein FlaI K06604 flaI; flagellar protein FlaI
D VCD_002298 flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D VCD_002299 flagellar synthesis regulator FleN K04562 flhG; flagellar biosynthesis protein FlhG
D VCD_001145 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D VCD_001932 type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D VCD_001931 type 4 fimbrial assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D VCD_001930 type 4 fimbrial assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC
D VCD_001929 leader peptidase (Prepilin peptidase)/N-methyltransferase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VCD_002764 type IV pilus (Tfp) assembly protein PilF K02656 pilF; type IV pilus assembly protein PilF
D VCD_001733 type IV pilus biogenesis protein PilQ K02666 pilQ; type IV pilus assembly protein PilQ
D VCD_001732 type IV pilus biogenesis protein PilP K02665 pilP; type IV pilus assembly protein PilP
D VCD_001731 type IV pilus biogenesis protein PilO K02664 pilO; type IV pilus assembly protein PilO
D VCD_001730 type IV pilus biogenesis protein PilN K02663 pilN; type IV pilus assembly protein PilN
D VCD_001729 type IV pilus biogenesis protein PilM K02662 pilM; type IV pilus assembly protein PilM
D VCD_003466 type 4 fimbrial biogenesis protein PilV K02671 pilV; type IV pilus assembly protein PilV
D VCD_003468 type 4 fimbrial biogenesis protein PilW K02672 pilW; type IV pilus assembly protein PilW
D VCD_003470 type IV pilus biogenesis protein PilE K02655 pilE; type IV pilus assembly protein PilE
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:vcj04812]
D VCD_001207 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VCD_003748 Rod shape determination protein K18640 parM; plasmid segregation protein ParM
D VCD_001956 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VCD_001955 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D VCD_002407 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D VCD_002406 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D VCD_002405 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D VCD_001469 chromosome (plasmid) partitioning protein ParA/sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D VCD_002305 chromosome (plasmid) partitioning protein ParA/sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D VCD_000229 chromosome (plasmid) partitioning protein ParA K03496 parA; chromosome partitioning protein
D VCD_001468 chromosome (plasmid) partitioning protein ParB/stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VCD_000230 chromosome (plasmid) partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:vcj04147]
D VCD_003353 chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VCD_001907 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VCD_002367 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VCD_000485 NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VCD_001128 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VCD_001121 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCD_000611 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCD_002359 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VCD_002042 peptidyl-prolyl cis-trans isomerase PpiA precursor K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VCD_003593 hypothetical protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D VCD_001703 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCD_000504 heat shock protein 60 family chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VCD_003472 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D VCD_001250 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VCD_003559 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VCD_001261 translation elongation factor Tu K02358 tuf; elongation factor Tu
D VCD_001303 translation elongation factor Tu K02358 tuf; elongation factor Tu
D VCD_002465 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VCD_001872 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_002383 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_002007 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_001368 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VCD_003645 sodium-dependent phosphate transporter K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D VCD_000635 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VCD_003352 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VCD_003289 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VCD_001723 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D VCD_001721 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VCD_001818 fructose-1,6-bisphosphatase type I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VCD_002781 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VCD_000217 1,4-alpha-glucan (glycogen) branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VCD_000575 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VCD_001622 glutamine synthetase type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VCD_001568 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VCD_002995 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VCD_000498 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D VCD_000692 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCD_001875 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VCD_001345 IMP cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VCD_001943 dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_001725 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VCD_000435 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VCD_001697 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VCD_000889 lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
D VCD_000933 lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
D VCD_000963 lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:vcj02048]
D VCD_002605 type I site-specific restriction-modification system R (restriction) subunit-like helicase K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D VCD_001190 type I site-specific deoxyribonuclease HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D VCD_003044 type I site-specific deoxyribonuclease HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D VCD_002616 type I site-specific deoxyribonuclease HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D VCD_002509 type I site-specific deoxyribonuclease HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D VCD_001189 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D VCD_003045 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D VCD_002617 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D VCD_002510 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D VCD_002601 hypothetical protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VCD_001188 type I restriction-modification system DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VCD_003046 type I restriction-modification system DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VCD_002618 type I restriction-modification system DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VCD_002511 type I restriction-modification system DNA-methyltransferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VCD_001737 methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VCD_000885 hemagglutinin associated protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D VCD_000052 hypothetical protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D VCD_000969 5-methylcytosine-specific restriction enzyme A K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D VCD_000888 RelE protein K06218 relE; mRNA interferase RelE/StbE
D VCD_000861 stability protein StbE K06218 relE; mRNA interferase RelE/StbE
D VCD_000887 DNA for RVC repeated sequence K18923 stbD; antitoxin StbD
D VCD_000862 stability protein StbD K18923 stbD; antitoxin StbD
D VCD_000957 DNA-damage-inducible protein J K07473 dinJ; DNA-damage-inducible protein J
D VCD_001185 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VCD_003512 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VCD_003049 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VCD_002621 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VCD_002514 HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VCD_002701 phage shock protein C K03973 pspC; phage shock protein C
D VCD_002700 phage shock protein B K03970 pspB; phage shock protein B
D VCD_000924 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D VCD_000904 ParE toxin protein K19092 parE1_3_4; toxin ParE1/3/4
D VCD_000850 plasmid stabilization system protein K19092 parE1_3_4; toxin ParE1/3/4
D VCD_000968 ParE toxin protein K19092 parE1_3_4; toxin ParE1/3/4
D VCD_000864 doc protein K07341 doc; death on curing protein
D VCD_000903 hypothetical protein K19165 phd; antitoxin Phd
D VCD_000967 hypothetical protein K19165 phd; antitoxin Phd
D VCD_000896 HigB toxin protein K07334 higB-1; toxin HigB-1
D VCD_000895 hypothetical protein K21498 higA-1; antitoxin HigA-1
D VCD_002820 hypothetical protein K19334 tabA; biofilm protein TabA
D VCD_001956 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VCD_001207 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VCD_001925 topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VCD_001924 topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VCD_002124 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VCD_001884 hypothetical protein K09159 cptB; antitoxin CptB
D VCD_003578 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:vcj04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:vcj04090]
C 01504 Antimicrobial resistance genes [BR:vcj01504]
D VCD_003731 aminoglycoside 3'-phosphotransferase K10673 strA; streptomycin 3"-kinase [EC:2.7.1.87]
D VCD_003732 aminoglycoside/hydroxyurea antibiotic resistance kinase K04343 strB; streptomycin 6-kinase [EC:2.7.1.72]
D VCD_003738 TetA K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D VCD_003211 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D VCD_000040 Na+/H+ antiporter K18218 tet35; tetracycline resistance efflux pump
D VCD_000866 acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D VCD_003740 florfenicol/chloramphenicol resistance protein K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D VCD_000003 acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D VCD_000980 acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D VCD_003741 hypothetical protein K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15]
D VCD_003730 dihydropteroate synthase K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D VCD_003671 dihydrofolate reductase K18589 dfrA1; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3]
D VCD_001444 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCD_003420 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VCD_001445 RND multidrug efflux transporter K18138 acrB; multidrug efflux pump
D VCD_002628 hypothetical protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D VCD_003364 HTH-type transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VCD_001919 type I secretion TolC precursor K12340 tolC; outer membrane protein
D VCD_002811 outer membrane protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:vcj00537]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:vcj03100]
D VCD_rna061 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCD_rna045 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCD_rna070 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCD_rna077 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D VCD_rna101 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna052 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna006 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna008 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna011 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna007 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna005 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D VCD_rna109 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCD_rna020 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCD_rna022 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCD_rna017 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D VCD_rna042 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCD_rna114 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCD_rna064 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCD_rna073 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCD_rna023 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D VCD_rna001 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VCD_rna003 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VCD_rna108 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D VCD_rna084 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCD_rna092 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCD_rna095 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCD_rna086 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCD_rna090 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D VCD_rna028 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCD_rna117 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCD_rna058 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCD_rna067 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D VCD_rna004 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna039 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna033 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna105 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna035 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna037 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna036 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna107 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D VCD_rna049 tRNA-His K14226 tRNA-His; tRNA His
D VCD_rna051 tRNA-His K14226 tRNA-His; tRNA His
D VCD_rna046 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VCD_rna076 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D VCD_rna074 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna083 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna091 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna085 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna089 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna096 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna087 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna093 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna097 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna002 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna106 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna120 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D VCD_rna027 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VCD_rna068 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VCD_rna057 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D VCD_rna088 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna098 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna094 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna013 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna030 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna031 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna032 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna034 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna119 tRNA-Met K14230 tRNA-Met; tRNA Met
D VCD_rna014 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VCD_rna018 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VCD_rna016 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D VCD_rna048 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCD_rna050 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCD_rna082 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCD_rna100 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D VCD_rna053 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCD_rna099 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCD_rna012 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCD_rna010 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCD_rna102 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D VCD_rna080 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCD_rna038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCD_rna019 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCD_rna021 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCD_rna041 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCD_rna015 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D VCD_rna065 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D VCD_rna040 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCD_rna112 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCD_rna113 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCD_rna110 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCD_rna111 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D VCD_rna026 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCD_rna056 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCD_rna069 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCD_rna103 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCD_rna104 tRNA-Val K14237 tRNA-Val; tRNA Val
D VCD_rna059 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna066 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna029 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna118 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna075 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna047 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D VCD_rna116 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna071 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna062 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna078 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna055 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna025 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna044 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D VCD_rna024 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna063 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna054 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna043 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna079 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna072 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna115 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D VCD_rna081 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D VCD_000275 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D VCD_003271 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D VCD_002375 2,4-dienoyl-CoA reductase (NADPH) K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D VCD_001053 NADPH:quinone reductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D VCD_001813 peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D VCD_000706 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D VCD_003113 hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D VCD_002369 peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D VCD_000733 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D VCD_003245 glutathione S-transferase omega K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D VCD_001556 cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D VCD_002215 thiol peroxidase Bcp-type K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D VCD_003504 thiol peroxidase Tpx-type K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D VCD_000332 organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D VCD_002226 hypothetical protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D VCD_000368 pirin-related protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D VCD_000066 flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D VCD_001545 ferritin-like protein 2 K02217 ftnA; ferritin [EC:1.16.3.2]
D VCD_002210 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D VCD_000815 ribonucleotide reductase of class III (anaerobic) activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D VCD_002493 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VCD_001073 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D VCD_003220 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D VCD_000422 coproporphyrinogen III oxidase oxygen-independent associated with heme uptak-like eradical SAM family protein HutW K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D VCD_002998 histone acetyltransferase HPA2 K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D VCD_000490 acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D VCD_003379 apolipoprotein N-acyltransferase/copper homeostasis protein CutE K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D VCD_003756 acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D VCD_003127 histone acetyltransferase HPA2 K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D VCD_002645 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D VCD_002644 leucyl/phenylalanyl-tRNA--protein transferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D VCD_002843 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VCD_002387 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VCD_001591 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VCD_003647 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D VCD_002052 thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D VCD_000352 hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D VCD_001917 glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D VCD_001966 reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D VCD_002432 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D VCD_000626 hypothetical protein K25555 dncV; cyclic GMP-AMP synthase [EC:2.7.7.-]
D VCD_001432 hypothetical protein K25555 dncV; cyclic GMP-AMP synthase [EC:2.7.7.-]
D VCD_002425 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VCD_003166 hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D VCD_002296 phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D VCD_002991 response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D VCD_003543 alkyl sulfatase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D VCD_001136 endonuclease I precursor K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D VCD_001996 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VCD_002353 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VCD_001567 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VCD_002270 hypothetical protein K01175 ybfF; esterase [EC:3.1.-.-]
D VCD_002066 hypothetical protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D VCD_002176 phage-related lysozyme (muraminidase) K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D VCD_003268 chitodextrinase precursor K21606 endo_I; endo-chitodextinase [EC:3.2.1.202]
D VCD_000618 chitodextrinase precursor K21606 endo_I; endo-chitodextinase [EC:3.2.1.202]
D VCD_000097 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D VCD_001515 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D VCD_003070 deacetylase DA1 K18454 deaA; chitin disaccharide deacetylase [EC:3.5.1.105]
D VCD_001201 hypothetical protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D VCD_002801 hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D VCD_001846 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D VCD_001915 adenylate cyclase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D VCD_002340 Maf/YceF/YhdE family protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D VCD_000075 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VCD_000557 hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VCD_002100 phenolic acid decarboxylase K13727 pdc; phenolic acid decarboxylase [EC:4.1.1.-]
D VCD_000058 YjeF protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D VCD_000714 hypothetical protein K26913 pbfA; (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase [EC:4.3.1.33]
D VCD_002034 cysteine desulfurase K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D VCD_002596 sialic acid-induced transmembrane protein YjhT(NanM) possible mutarotase K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D VCD_000662 FKBP-type peptidyl-prolyl cis-trans isomerase/macrophage infectivity potentiator K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D VCD_001819 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D VCD_002833 ATP-dependent DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D VCD_003324 electron transport complex protein RnfD K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D VCD_003323 electron transport complex protein RnfC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D VCD_003322 electron transport complex protein RnfB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D VCD_002046 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D VCD_002047 Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D VCD_002048 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D VCD_002049 Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D VCD_002050 Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D VCD_002051 Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D VCD_002909 type cbb3 cytochrome oxidase biogenesis protein CcoI K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D VCD_003309 lead cadmium zinc and mercury transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D VCD_003810 hypothetical protein K06206 sfsA; sugar fermentation stimulation protein A
D VCD_000609 periplasmic protein TorT precursor K11930 torT; periplasmic protein TorT
D VCD_003588 hypothetical protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D VCD_002856 formate dehydrogenase chain D K02379 fdhD; FdhD protein
D VCD_003573 ferredoxin 2Fe-2S K04755 fdx; ferredoxin, 2Fe-2S
D VCD_003521 ferredoxin K05524 fdxA; ferredoxin
D VCD_003097 ferredoxin K11107 yfaE; ferredoxin
D VCD_003325 electron transport complex protein RnfG K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D VCD_003326 electron transport complex protein RnfE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D VCD_003321 electron transport complex protein RnfA K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D VCD_001472 flavoprotein MioC K06205 mioC; MioC protein
D VCD_001935 flavodoxin 2 K03840 fldB; flavodoxin II
D VCD_003577 iron-sulfur cluster assembly scaffold protein IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D VCD_000438 soluble cytochrome b562 K15536 cybC; soluble cytochrome b562
D VCD_000649 periplasmic nitrate reductase component NapD K02570 napD; periplasmic nitrate reductase NapD
D VCD_000650 nitrate reductase K02572 napF; ferredoxin-type protein NapF
D VCD_002684 periplasmic nitrate reductase component NapE K02571 napE; periplasmic nitrate reductase NapE
D VCD_002268 flavodoxin 1 K03839 fldA; flavodoxin I
D VCD_000646 cytochrome c-type protein NapC K02569 napC; cytochrome c-type protein NapC
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D VCD_003369 sulfate transporter CysZ-type K06203 cysZ; CysZ protein
D VCD_000441 glyoxylase family protein K08234 yaeR; glyoxylase I family protein
D VCD_001146 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D VCD_002449 membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D VCD_002450 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D VCD_001577 HemY-like protein K02498 hemY; HemY protein
D VCD_001552 ubiquinone biosynthesis monooxygenase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D VCD_001551 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D VCD_001446 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D VCD_003757 hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D VCD_003451 multidrug efflux pump component MtrF K12942 abgT; aminobenzoyl-glutamate transport protein
D VCD_003464 hypothetical protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
D VCD_000321 membrane protein, thiosulphate:quinone oxidoreductase DoxD-like protein K15977 K15977; putative oxidoreductase
D VCD_000744 protein acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D VCD_003200 cold shock protein CspD K03704 cspA; cold shock protein
D VCD_000065 cold shock protein CspE K03704 cspA; cold shock protein
D VCD_000082 cold shock protein CspG K03704 cspA; cold shock protein
D VCD_000400 cold shock protein CspA K03704 cspA; cold shock protein
D VCD_001294 regulator of sigma D K07740 rsd; regulator of sigma D
D VCD_003803 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D VCD_001651 transcription accessory protein K06959 tex; protein Tex
C 99974 Translation
D VCD_001357 metallo-beta-lactamase family protein RNA-specific K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D VCD_002715 heat shock protein HslJ K03668 hslJ; heat shock protein HslJ
D VCD_003199 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D VCD_002439 cell division trigger factor K03545 tig; trigger factor
D VCD_003480 tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D VCD_001500 Mg(2+) chelatase family protein/ComM-related protein K07391 comM; magnesium chelatase family protein
D VCD_000385 SM-20-related protein K07394 K07394; SM-20-related protein
D VCD_000430 hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D VCD_000488 OsmC/Ohr family protein K07397 yhfA; putative redox protein
D VCD_001647 NfuA Fe-S protein maturation K07400 nfuA; Fe/S biogenesis protein NfuA
D VCD_003356 selenoprotein W-related protein K07401 K07401; selenoprotein W-related protein
C 99976 Replication and repair
D VCD_003277 hypothetical protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D VCD_003434 hypothetical protein K01146 xni; protein Xni
D VCD_002585 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D VCD_003677 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D VCD_001095 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D VCD_001399 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D VCD_001549 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D VCD_000783 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D VCD_001028 hypothetical protein K07460 yraN; putative endonuclease
D VCD_000581 putative endonuclease containing a URI domain K07461 K07461; putative endonuclease
D VCD_001517 hypothetical protein K04096 smf; DNA processing protein
D VCD_003233 ATPase AAA family K07478 ycaJ; putative ATPase
D VCD_001519 hypothetical protein K07479 yrdD; putative DNA topoisomerase
D VCD_000527 hypothetical protein K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D VCD_003675 hypothetical protein K06919 K06919; putative DNA primase/helicase
D VCD_000867 IS5 transposase K07481 K07481; transposase, IS5 family
D VCD_000992 IS5 transposase K07481 K07481; transposase, IS5 family
D VCD_000530 transposase OrfAB subunit A K07483 K07483; transposase
D VCD_002581 transposase OrfAB subunit A K07483 K07483; transposase
D VCD_000917 transposase OrfAB subunit A K07483 K07483; transposase
D VCD_000819 transposase OrfAB subunit A K07483 K07483; transposase
D VCD_000048 IS1004 transposase K07491 rayT; REP-associated tyrosine transposase
D VCD_000832 IS1004 transposase K07491 rayT; REP-associated tyrosine transposase
D VCD_003459 IS1004 transposase K07491 rayT; REP-associated tyrosine transposase
D VCD_000999 IS1004 transposase K07491 rayT; REP-associated tyrosine transposase
D VCD_000531 transposase OrfAB subunit B K07497 K07497; putative transposase
D VCD_002582 transposase OrfAB subunit B K07497 K07497; putative transposase
D VCD_000918 transposase OrfAB subunit B K07497 K07497; putative transposase
D VCD_000818 transposase OrfAB subunit B K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D VCD_002699 phage shock protein A K03969 pspA; phage shock protein A
D VCD_000144 phage shock protein E K03972 pspE; phage shock protein E
D VCD_003287 transcriptional regulatory protein K09747 ebfC; nucleoid-associated protein EbfC
D VCD_002560 deoxyribodipyrimidine photolyase single-strand-specific K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D VCD_003419 RND multidrug efflux transporter K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D VCD_003071 choline-glycine betaine transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D VCD_003349 proton/peptide symporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D VCD_001912 hypothetical protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D VCD_000657 hypothetical protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D VCD_002058 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VCD_002708 hypothetical protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VCD_002355 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VCD_003542 sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VCD_001993 sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VCD_002925 sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VCD_003657 branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D VCD_001997 nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VCD_002411 nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VCD_000071 nucleoside permease NupC K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VCD_003197 TrkA Potassium channel-family protein K07085 K07085; putative transport protein
C 99978 Cell growth
D VCD_002678 intracellular septation protein A K06190 ispZ; intracellular septation protein
D VCD_000545 allophanate hydrolase subunit 1 K06351 kipI; inhibitor of KinA
D VCD_001508 hypothetical protein K06377 spo0M; sporulation-control protein
D VCD_002488 hypothetical protein K06415 spoVR; stage V sporulation protein R
D VCD_001289 membrane-bound metallopeptidase K22719 envC; murein hydrolase activator
C 99993 Cell motility
D VCD_002468 hypothetical protein K07337 K07337; penicillin-binding protein activator
D VCD_003189 regulator of competence-specific genes K07343 tfoX; DNA transformation protein and related proteins
D VCD_002657 DNA transformation protein TfoX K07343 tfoX; DNA transformation protein and related proteins
D VCD_003429 Syd protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D VCD_002877 ProQ: influences osmotic activation of compatible solute ProP K03607 proQ; ProP effector
D VCD_001544 universal stress protein A K06149 uspA; universal stress protein A
D VCD_002913 universal stress protein E K14055 uspE; universal stress protein E
D VCD_001179 universal stress protein family 3 K14061 uspF; universal stress protein F
D VCD_001624 GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D VCD_002040 hypothetical protein K07167 chrR; putative transcriptional regulator
D VCD_003376 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D VCD_001850 phosphate starvation-inducible protein PhoH K07175 phoH2; PhoH-like ATPase
D VCD_002490 serine protein kinase K07180 prkA; serine protein kinase
D VCD_001320 hypothetical protein K07182 K07182; CBS domain-containing protein
D VCD_003059 hypothetical protein K07182 K07182; CBS domain-containing protein
D VCD_001911 arylsulfatase K07184 ygiM; SH3 domain protein
D VCD_002002 hypothetical protein K07186 smp; membrane protein
D VCD_002867 protein YajQ K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D VCD_003234 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D VCD_002197 outer membrane lipoprotein LolB precursor K02494 lolB; outer membrane lipoprotein LolB
D VCD_002318 surface lipoprotein VacJ K04754 mlaA; phospholipid-binding lipoprotein MlaA
D VCD_002090 outer membrane chaperone Skp (OmpH) precursor K06142 hlpA; outer membrane protein
D VCD_001072 membrane protein K06194 nlpD; lipoprotein NlpD
D VCD_003763 lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D VCD_000465 outer membrane protein W precursor K07275 ompW; outer membrane protein
D VCD_001254 membrane protein K07283 ydiY; putative salt-induced outer membrane protein
D VCD_002381 starvation lipoprotein Slp like protein K07285 slp; outer membrane lipoprotein
D VCD_002043 hypothetical protein K07286 yajG; uncharacterized lipoprotein
D VCD_003303 AsmA protein K07289 asmA; AsmA protein
D VCD_003363 hypothetical protein K07340 ybbJ; inner membrane protein
D VCD_002769 membrane-fusion protein K01993 ABC-2.TX; HlyD family secretion protein
D VCD_002720 membrane-fusion protein K01993 ABC-2.TX; HlyD family secretion protein
D VCD_002812 membrane-fusion protein K02005 ABC.CD.TX; HlyD family secretion protein
D VCD_002313 cytochrome c-type biogenesis protein CcmE heme chaperone K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D VCD_002316 cytochrome c heme lyase subunit CcmL K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D VCD_003568 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D VCD_003597 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D VCD_001260 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D VCD_003062 glucans biosynthesis protein G precursor K03670 mdoG; periplasmic glucans biosynthesis protein
D VCD_000781 membrane protein TerC K05794 terC; tellurite resistance protein TerC
D VCD_003594 cytoplasmic copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D VCD_001164 ApaG protein K06195 apaG; ApaG protein
D VCD_001583 frataxin CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D VCD_000423 hypothetical protein K07227 chuX; heme iron utilization protein
D VCD_003087 iron-regulated protein A precursor K07231 K07231; putative iron-regulated protein
D VCD_002018 NnrS protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D VCD_000689 GlpM protein K02442 glpM; membrane protein GlpM
D VCD_003335 bacteriocin production protein K03558 cvpA; membrane protein required for colicin V production
D VCD_002916 hypothetical protein K03796 bax; Bax protein
D VCD_002630 paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D VCD_000292 oxidoreductase Gfo/Idh/MocA family K03810 mviM; virulence factor
D VCD_001798 ElaA protein K02348 elaA; ElaA protein
D VCD_000437 histidinol phosphatase K04477 ycdX; putative hydrolase
D VCD_001988 autonomous glycyl radical cofactor K06866 grcA; autonomous glycyl radical cofactor
D VCD_002012 tRNA-binding protein YgjH K06878 K06878; tRNA-binding protein
D VCD_003806 hypothetical protein K07001 K07001; NTE family protein
D VCD_002730 HAD superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D VCD_003784 hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein
D VCD_001626 ribonuclease BN K07058 K07058; membrane protein
D VCD_001672 FxsA protein K07113 fxsA; UPF0716 protein FxsA
D VCD_002033 sulfur acceptor protein SufE for iron-sulfur cluster assembly K02426 sufE; cysteine desulfuration protein SufE
D VCD_003092 rhodanese domain protein K07146 K07146; UPF0176 protein
D VCD_003215 hypothetical protein K07153 hflD; high frequency lysogenization protein
D VCD_001271 protein SlyX K03745 slyX; SlyX protein
D VCD_001518 hypothetical protein K03747 smg; Smg protein
D VCD_000523 CreA protein K05805 creA; CreA protein
D VCD_001135 protein SprT K02742 sprT; SprT protein
D VCD_003336 DedD protein K03749 dedD; DedD protein
D VCD_001736 DamX-related protein K03112 damX; DamX protein
D VCD_003157 SanA protein K03748 sanA; SanA protein
D VCD_002631 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D VCD_002874 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D VCD_000194 membrane protein K08974 K08974; putative membrane protein
D VCD_000533 hypothetical protein K08984 yjdF; putative membrane protein
D VCD_001592 hypothetical protein K08985 K08985; putative lipoprotein
D VCD_003029 membrane protein K08990 ycjF; putative membrane protein
D VCD_001602 hypothetical protein K08993 yhhL; putative membrane protein
D VCD_002524 hypothetical protein K09858 K09858; SEC-C motif domain protein
D VCD_003278 lipoprotein-related protein K09914 K09914; putative lipoprotein
D VCD_000314 maltose operon periplasmic protein MalM K05775 malM; maltose operon periplasmic protein
D VCD_000778 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
D VCD_002790 membrane protein K21741 rclC; reactive chlorine resistance protein C
C 99997 Function unknown
D VCD_002793 AnkB protein K06867 K06867; uncharacterized protein
D VCD_003030 hypothetical protein K06918 K06918; uncharacterized protein
D VCD_000151 HTH DNA-binding protein K06933 K06933; uncharacterized protein
D VCD_000730 hypothetical protein K06934 K06934; uncharacterized protein
D VCD_002716 hypothetical protein K06938 K06938; uncharacterized protein
D VCD_003285 hypothetical protein K06940 K06940; uncharacterized protein
D VCD_002568 hypothetical protein K06946 K06946; uncharacterized protein
D VCD_003222 amine oxidase flavin-containing K06954 K06954; uncharacterized protein
D VCD_003114 sodium/dicarboxylate symporter K06956 K06956; uncharacterized protein
D VCD_000191 hypothetical protein K06975 K06975; uncharacterized protein
D VCD_002059 hypothetical protein K06987 K06987; uncharacterized protein
D VCD_000943 glyoxalase family protein K06996 K06996; uncharacterized protein
D VCD_000677 glyoxalase family protein K06996 K06996; uncharacterized protein
D VCD_001923 hypothetical protein K07000 K07000; uncharacterized protein
D VCD_002470 hypothetical protein K07000 K07000; uncharacterized protein
D VCD_001742 extracellular nuclease-related protein K07004 K07004; uncharacterized protein
D VCD_002326 hypothetical protein K07014 K07014; uncharacterized protein
D VCD_001763 hypothetical protein K07014 K07014; uncharacterized protein
D VCD_001753 alpha/beta fold family hydrolase K07019 K07019; uncharacterized protein
D VCD_003556 hypothetical protein K07034 K07034; uncharacterized protein
D VCD_003235 protein export cytoplasm protein SecA ATPase RNA helicase K07039 K07039; uncharacterized protein
D VCD_002544 hypothetical protein K07039 K07039; uncharacterized protein
D VCD_001758 hypothetical protein K07070 K07070; uncharacterized protein
D VCD_003358 hypothetical protein K07071 K07071; uncharacterized protein
D VCD_001177 TRAP transporter solute receptor TAXI family precursor K07080 K07080; uncharacterized protein
D VCD_000102 TRAP transporter solute receptor TAXI family precursor K07080 K07080; uncharacterized protein
D VCD_000288 hypothetical protein K07090 K07090; uncharacterized protein
D VCD_001967 hypothetical protein K07090 K07090; uncharacterized protein
D VCD_002520 hypothetical protein K07090 K07090; uncharacterized protein
D VCD_003648 hypothetical protein K07090 K07090; uncharacterized protein
D VCD_000201 hypothetical protein K07093 K07093; uncharacterized protein
D VCD_003357 phosphodiesterase YfcE K07095 K07095; uncharacterized protein
D VCD_001812 protein YtfJ precursor K07109 K07109; uncharacterized protein
D VCD_000681 hypothetical protein K07112 K07112; uncharacterized protein
D VCD_000682 hypothetical protein K07112 K07112; uncharacterized protein
D VCD_000286 hypothetical protein K07118 K07118; uncharacterized protein
D VCD_000693 hypothetical protein K07120 K07120; uncharacterized protein
D VCD_001027 hypothetical protein K07121 K07121; uncharacterized protein
D VCD_003150 hypothetical protein K07126 K07126; uncharacterized protein
D VCD_000315 hypothetical protein K07126 K07126; uncharacterized protein
D VCD_000211 glutathione S-transfersae-related protein K07136 K07136; uncharacterized protein
D VCD_003519 NAD(FAD)-utilizing dehydrogenase K07137 K07137; uncharacterized protein
D VCD_001978 hypothetical protein K07139 K07139; uncharacterized protein
D VCD_000408 ferredoxin-NADPH reductase K07140 K07140; MOSC domain-containing protein
D VCD_002038 hypothetical protein K07157 K07157; uncharacterized protein
D VCD_001086 GatB/Yqey K09117 K09117; uncharacterized protein
D VCD_001149 hypothetical protein K09131 K09131; uncharacterized protein
D VCD_003390 hypothetical protein K09158 K09158; uncharacterized protein
D VCD_003284 hypothetical protein K09160 K09160; uncharacterized protein
D VCD_002491 hypothetical protein K09161 K09161; uncharacterized protein
D VCD_003221 hypothetical protein K09701 K09701; uncharacterized protein
D VCD_000723 hemolysin K09712 K09712; uncharacterized protein
D VCD_000258 hypothetical protein K09749 K09749; uncharacterized protein
D VCD_003450 hypothetical protein K09768 K09768; uncharacterized protein
D VCD_002676 hypothetical protein K09780 K09780; uncharacterized protein
D VCD_000402 hypothetical protein K09781 K09781; uncharacterized protein
D VCD_002489 hypothetical protein K09786 K09786; uncharacterized protein
D VCD_003290 hypothetical protein K09790 K09790; uncharacterized protein
D VCD_002486 hypothetical protein K09791 K09791; uncharacterized protein
D VCD_002911 heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain possible membrane copper tolerance protein K09792 K09792; uncharacterized protein
D VCD_000081 hypothetical protein K09797 K09797; uncharacterized protein
D VCD_003478 hypothetical protein K09801 K09801; uncharacterized protein
D VCD_000578 hypothetical protein K09802 K09802; uncharacterized protein
D VCD_001122 hypothetical protein K09807 K09807; uncharacterized protein
D VCD_003019 hypothetical protein K09824 virK; uncharacterized protein
D VCD_002053 hypothetical protein K05952 K05952; uncharacterized protein
D VCD_003014 hypothetical protein K05952 K05952; uncharacterized protein
D VCD_002871 hypothetical protein K00243 K00243; uncharacterized protein
D VCD_002795 hypothetical protein K09822 K09822; uncharacterized protein
D VCD_002629 hypothetical protein K09857 K09857; uncharacterized protein
D VCD_002466 hypothetical protein K09859 K09859; uncharacterized protein
D VCD_001994 hypothetical protein K09861 K09861; uncharacterized protein
D VCD_001926 hypothetical protein K09862 K09862; uncharacterized protein
D VCD_001353 hypothetical protein K09891 K09891; uncharacterized protein
D VCD_001574 hypothetical protein K09894 K09894; uncharacterized protein
D VCD_001879 hypothetical protein K09895 K09895; uncharacterized protein
D VCD_001505 protein YihD K09896 K09896; uncharacterized protein
D VCD_000319 hypothetical protein K09897 K09897; uncharacterized protein
D VCD_001751 hypothetical protein K09898 K09898; uncharacterized protein
D VCD_003242 hypothetical protein K09899 K09899; uncharacterized protein
D VCD_003136 hypothetical protein K09901 K09901; uncharacterized protein
D VCD_002408 protein YcgL K09902 K09902; uncharacterized protein
D VCD_002327 hypothetical protein K09904 K09904; uncharacterized protein
D VCD_002294 hypothetical protein K09907 K09907; uncharacterized protein
D VCD_001039 hypothetical protein K09908 K09908; uncharacterized protein
D VCD_000207 hypothetical protein K09909 K09909; uncharacterized protein
D VCD_002523 hypothetical protein K09909 K09909; uncharacterized protein
D VCD_003804 hypothetical protein K09910 K09910; uncharacterized protein
D VCD_002892 hypothetical protein K09911 K09911; uncharacterized protein
D VCD_000580 hypothetical protein K09915 K09915; uncharacterized protein
D VCD_002372 hypothetical protein K09916 K09916; uncharacterized protein
D VCD_000759 hypothetical protein K09917 K09917; uncharacterized protein
D VCD_002020 hypothetical protein K09918 K09918; uncharacterized protein
D VCD_001921 hypothetical protein K09920 K09920; uncharacterized protein
D VCD_001587 hypothetical protein K09921 K09921; uncharacterized protein
D VCD_002803 hypothetical protein K09922 K09922; uncharacterized protein
D VCD_002908 hypothetical protein K09926 K09926; uncharacterized protein
D VCD_002481 hypothetical protein K09928 K09928; uncharacterized protein
D VCD_001272 protein YjeT K09937 K09937; uncharacterized protein
D VCD_002207 hypothetical protein K09938 K09938; uncharacterized protein
D VCD_001338 hypothetical protein K09939 K09939; uncharacterized protein
D VCD_002757 hypothetical protein K09941 K09941; uncharacterized protein
D VCD_003084 hypothetical protein K09947 K09947; uncharacterized protein
D VCD_002403 hypothetical protein K09948 K09948; uncharacterized protein
D VCD_001807 hypothetical protein K09950 K09950; uncharacterized protein
D VCD_000085 hypothetical protein K09954 K09954; uncharacterized protein
D VCD_000021 hypothetical protein K09956 K09956; uncharacterized protein
D VCD_000910 hypothetical protein K09962 K09962; uncharacterized protein
D VCD_003523 hypothetical protein K09964 K09964; uncharacterized protein
D VCD_002119 hypothetical protein K09973 K09973; uncharacterized protein
D VCD_002273 hypothetical protein K09977 K09977; uncharacterized protein
D VCD_001914 phosphate transport regulator K07220 K07220; uncharacterized protein
D VCD_003085 iron-regulated protein A precursor K07338 K07338; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 12, 2024