+D GENES KO
#
KEGG Orthology (KO) - Vibrio parahaemolyticus RIMD 2210633
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:vpa00010]
D VP2731 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VP2855 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VP0313 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VP0244 GlpX protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VP2599 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VP0239 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VP2157 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPA1230 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VP2600 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VP2829 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VP2561 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VP0356 pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPA0823 pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VP2039 pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPA0372 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VP2519 pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VP2518 pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VP2517 dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPA0147 Lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPA0071 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VP2121 alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPA0566 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VP1703 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D VP2878 acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VP2397 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VP0839 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VP2158 conserved hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D VP0129 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VP2634 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPA1695 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPA0180 phospho-beta-glucosidase B K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VP0793 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPA1667 PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VP2046 PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:vpa00020]
D VP0842 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D VP2495 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VP1011 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VP0847 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VP0848 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VP2517 dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VP0850 succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VP0849 succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VP0845 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VP0846 succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VP0843 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VP0844 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VP2840 fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VP2841 fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VP2842 fumarate reductase, 15 kDa hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D VP2843 fumarate reductase, 13 kDa hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D VP1873 fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VP2873 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VPA0503 putative transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2]
D VP0325 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VP0129 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VP2519 pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VP2518 pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:vpa00030]
D VP2731 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VP1710 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VP1709 DevB protein K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D VP1708 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VP2741 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VPA1181 transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VP2605 transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VPA1180 transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D VP2592 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D VP2436 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D VPA1083 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D VP2434 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D VP0839 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VP0739 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VP0062 phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D VPA0083 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VPA1708 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VP0065 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VP0063 thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D VPA0082 putative 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D VPA1707 putative 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D VP2599 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VP0313 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VP0244 GlpX protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VP2855 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:vpa00040]
D VPA0086 putative exopolygalacturonate lyase K22994 pelX; pectate disaccharide-lyase [EC:4.2.2.9]
D VPA0088 oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D VPA0079 putative pectin degradation protein (sugar phosphate isomerase family) K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D VPA0077 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D VPA1706 putative uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D VPA1700 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D VPA1705 mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D VP0236 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VP0237 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VP2711 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPA1675 sugar isomerase SgaE, AraD/FucA family K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D VP2741 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D VPA1676 putative L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D VPA1674 L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D VP1329 fatty aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00051 Fructose and mannose metabolism [PATH:vpa00051]
D VPA0967 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPA1425 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPA0535 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VP2855 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VP0313 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VP0244 GlpX protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VP0369 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D VPA0502 putative oxidoreductase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-]
D VPA0812 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D VP2599 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VP0239 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VPA0298 PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VPA1421 PTS system, fructose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VPA0811 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VPA0500 putative PTS system, mannitol-specific enzyme II component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D VPA0501 mannitol-specific PTS system enzyme II component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VP0370 PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
C 00052 Galactose metabolism [PATH:vpa00052]
D VP2397 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D VP2398 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VP2399 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VPA0879 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VP2400 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VP0237 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VP2711 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VP0839 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VP2403 evolved beta-D-galactosidase; cryptic gene K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D VP2404 evolved beta-D-galactosidase; cryptic gene K12112 ebgC; evolved beta-galactosidase subunit beta
D VP1163 putative alpha-1,6-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D VP2855 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VP2077 putative maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:vpa00053]
D VP0236 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VP2023 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VPA0231 phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VPA0230 putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VPA0229 putative membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D VPA1675 sugar isomerase SgaE, AraD/FucA family K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VP1329 fatty aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:vpa00500]
D VP2077 putative maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D VP0237 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VP2711 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VP2635 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VP2637 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VP2636 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VP2634 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPA1695 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPA0180 phospho-beta-glucosidase B K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D VPA0833 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VP1023 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VP1024 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D VPA1618 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VPA1620 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D VPA1638 putative pullulanase precursor K01200 pulA; pullulanase [EC:3.2.1.41]
D VPA0999 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VP0020 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VPA1616 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VPA0461 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D VPA1619 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D VP0793 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPA1645 glycogen operon protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D VP0710 PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VP0711 trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D VP0839 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VP2731 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:vpa00520]
D VPA0055 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D VP2338 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D VP0545 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D VP0755 N,N'-diacetylchitobiase precursor K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VP2486 beta-N-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VP2487 N,N'-diacetylchitobiose phosphorylase K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D VP0793 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VP0831 PTS system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VP1494 ROK family protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D VP0829 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D VPA0038 glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D VP2485 putative N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D VP0359 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VP2461 phosphoglucomutase/phosphomannomutase family protein MrsA K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D VP3067 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D VPA1744 putative PTS system, sucrose-specific IIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VP0543 glucokinase regulatory protein-related protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VPA1743 GckR family protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D VP0544 conserved hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D VP2658 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VP2932 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VPA1667 PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VP2046 PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VP0839 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VP0237 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VP2711 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VP0236 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VP2398 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VP2399 galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D VPA0879 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VP2400 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VP2023 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VP2731 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VPA0967 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPA1425 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPA0535 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VPA0833 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D VP1023 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:vpa00620]
D VP2878 acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VP2519 pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VP2518 pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VP2517 dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VP0994 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VP2121 alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPA0566 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPA0071 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPA0611 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VP2082 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VP2083 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VP0356 pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPA0823 pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VP2039 pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VP2302 acetyl-CoA carboxylase, carboxyl transferase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VP2880 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VP2881 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VP2189 acetyl-CoA carboxylase, carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPA0795 acetyl-CoA carboxylase, carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VP1627 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VP1703 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D VPA1499 L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D VPA0147 Lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPA0144 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D VPA1005 D-lactate dehydrogenase, FAD protein, NADH independent K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D VP2166 putative lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VP2109 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VPA0774 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VPA0302 hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D VP2295 putative hydroxyacylglutathione hydrolase GloB K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D VP1914 glyoxylase II family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D VP1258 malate oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D VP2767 putative malate oxidoreductase K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D VP2544 oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VP2543 oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VP2545 putative oxaloacetate decarboxylase gamma chain 1 K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VP0325 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VP1873 fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D VP2873 fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D VPA0503 putative transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2]
D VP2840 fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VP2841 fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VP2842 fumarate reductase, 15 kDa hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D VP2843 fumarate reductase, 13 kDa hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D VP2761 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VP0129 phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D VPA0372 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VP0583 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D VPA0201 malate synthase-related protein K01638 aceB; malate synthase [EC:2.3.3.9]
D VPA0620 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1123 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1204 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VP0346 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:vpa00630]
D VP0584 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D VP2878 acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VP0583 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D VPA0201 malate synthase-related protein K01638 aceB; malate synthase [EC:2.3.3.9]
D VP0325 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VP0842 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D VP2495 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VPA0620 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1123 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1204 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1205 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D VPA1418 catalase K03781 katE; catalase [EC:1.11.1.6]
D VPA0305 catalase K03781 katE; catalase [EC:1.11.1.6]
D VP2678 2-hydroxyacid dehydrogenase family protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VP2805 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D VP2714 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VP0121 glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VP0715 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPA0803 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPA0801 glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VPA0805 glycine cleavage system protein T2 K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VP2517 dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPA0802 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VPA0117 conserved hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VPA0083 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VPA1708 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VP0065 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D VP1513 putative formate dehydrogenase large subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VPA0485 putative formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VP1514 formate dehydrogenase, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VP1515 formate dehydrogenase, cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D VP0864 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:vpa00640]
D VP2878 acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VP1644 PrpE protein K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D VPA0611 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VP2082 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VP2083 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VPA0647 putative pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D VPA0646 putative pyruvate dehydrogenase E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D VPA0645 putative dihydrolipoamide acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D VP2517 dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VP0994 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VP0028 zinc-binding alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D VP0030 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VP2208 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VP2302 acetyl-CoA carboxylase, carboxyl transferase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VP2880 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VP2881 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VP2189 acetyl-CoA carboxylase, carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPA0795 acetyl-CoA carboxylase, carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VP1771 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VP0849 succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VP0850 succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VPA1122 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPA0621 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VP1647 methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D VP1646 aconitate hydratase 1 K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D VP1645 conserved hypothetical protein K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D VP2495 aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D VP1648 carboxyphosphonoenolpyruvate phosphonomutase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D VPA0147 Lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VPA0673 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D VPA0829 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D VP0363 glycerol dehydrogenase GldH K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:vpa00650]
D VPA0620 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1123 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1204 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VP0030 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VP2208 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VP1231 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPA0870 short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VP2121 alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPA1202 polyhydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D VPA1205 acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D VP2543 oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VP0845 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VP0846 succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VP0843 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VP0844 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VP2840 fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VP2841 fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VP2842 fumarate reductase, 15 kDa hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D VP2843 fumarate reductase, 13 kDa hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D VP1771 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VP2630 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VP1772 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VP0994 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D VPA0615 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D VPA1129 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D VPA0575 acetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPA1158 acetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VP0352 acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VP3058 acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VP0353 acetolactate synthase III, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VP3059 acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:vpa00660]
D VP0352 acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VP3058 acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VP0353 acetolactate synthase III, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VP3059 acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VP0849 succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D VP0850 succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D VP0343 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VP0342 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VP0344 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:vpa00562]
D VP0593 inositol monophosphate family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VPA1122 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPA0621 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VP0239 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:vpa00190]
D VP0971 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D VP0845 succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VP0846 succinate dehydrogenase, iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VP0843 succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D VP0844 succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D VP2840 fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VP2841 fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VP2842 fumarate reductase, 15 kDa hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D VP2843 fumarate reductase, 13 kDa hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D VP0441 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D VP0442 ubiquinol-cytochrome c reductase, cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VP0443 ubiquinol-cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D VPA0544 putative cytochrome c oxidase assembly factor K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPA0631 putative protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPA0630 hypothetical protein K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D VPA0539 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D VPA0537 cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D VPA0536 cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D VPA0538 putative cytochrome c oxidase assembly transmembrane protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D VPA0543 putative cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D VP1544 cytochrome c oxidase, subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D VP1543 cytochrome c oxidase, subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D VP1542 cytochrome c oxidase, subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D VP1541 cytochrome c oxidase, subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D VPA0629 cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D VPA0628 cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D VPA0627 cytochrome o ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D VP1053 cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VPA1137 cytochrome BD2, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VP1054 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VPA1138 cytochrome BD2, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VPA1144 hypothetical protein K08738 CYC; cytochrome c
D VP3071 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VP3069 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VP3070 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VP3072 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VP3068 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VP3075 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VP3073 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VP3074 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VP0311 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D VP1165 conserved hypothetical protein K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D VP1770 putative exopolyphosphatase Ppx1 K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D VP0573 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VP0578 conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:vpa00680]
D VPA0071 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VPA0070 putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D VP1513 putative formate dehydrogenase large subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VPA0485 putative formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D VP1514 formate dehydrogenase, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D VP1515 formate dehydrogenase, cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D VP0715 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPA0803 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VP2714 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VP2678 2-hydroxyacid dehydrogenase family protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VP2561 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VP2761 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D VP0325 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VP2599 fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D VP0313 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VP0244 GlpX protein K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D VP2855 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VP1162 trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VP1161 cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VP1031 TorD protein K03533 torD; TorA specific chaperone
D VPA0127 cytochrome c-type protein YecK K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D VPA0128 biotin sulfoxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VPA0765 putative glutamate synthetase K22083 mgsC; methylamine---glutamate N-methyltransferase subunit C [EC:2.1.1.21]
D VPA0611 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VP2082 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VP2083 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VP2878 acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VPA0372 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D VP2829 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VP2593 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VP1247 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VP2431 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:vpa00910]
D VPA1058 putative nitrate transport protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VPA1057 putative nitrate transporter K15577 nrtB; nitrate/nitrite transport system permease protein
D VPA1056 nitrate transporter ATPase component NasD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VPA1199 periplasmic nitrate reductase K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D VPA1200 periplasmic nitrate reductase, cytochrome c-type protein K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D VPA1065 putative nitrate reductase, large subunit protein K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D VPA0987 nitrite reductase (NAD(P)H), large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D VPA1055 nitrite reductase K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D VPA0986 nitrite reductase (NAD(P)H), small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D VPA1054 putative nitrite reductase NADPH (small subunit) oxidoreductase protein K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D VP1929 nitrite reductase periplasmic cytochrome c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D VP1189 hybrid cluster protein; similar to prismane-protein homolog K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D VPA0296 putative oxidoreductase protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D VP1602 putative NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VP0121 glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VP0482 glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VP0484 glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VP0481 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VP0483 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VP2514 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D VPA1502 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
D VPA0221 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:vpa00920]
D VP0293 sulfate adenylate transferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VP0292 sulfate adenylate transferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VP0296 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VP0144 CysQ protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D VP2720 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D VP2722 sulfite reductase (NADPH) flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D VP2721 sulfite reductase (NADPH) hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D VP1221 putative cytochrome subunit of sulfide dehydrogenase precursor K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D VP2014 putative tetrathionate reductase, subunit A K08357 ttrA; tetrathionate reductase subunit A
D VP2011 tetrathionate reductase, subunit B K08358 ttrB; tetrathionate reductase subunit B
D VP2013 putative tetrathionate reductase complex, subunit C K08359 ttrC; tetrathionate reductase subunit C
D VP1200 putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPA1175 putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VP2952 GlpE protein K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D VP2833 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VP0797 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VP0946 cysteine synthase/cystathionine beta-synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VP1751 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D VP2765 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VP1447 putaive anaerobic dimethyl sulfoxide reductase, subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D VP1448 anaerobic dimethyl sulfoxide reductase, subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D VP1449 putative anaerobic dimethyl sulfoxide reductase, chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:vpa00061]
D VP2302 acetyl-CoA carboxylase, carboxyl transferase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D VP2880 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D VP2881 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D VP2189 acetyl-CoA carboxylase, carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VPA0795 acetyl-CoA carboxylase, carboxyl transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D VP0894 putative acyl carrier protein K02078 acpP; acyl carrier protein
D VP2053 acyl carrier protein K02078 acpP; acyl carrier protein
D VP0895 putative acyl carrier protein K02078 acpP; acyl carrier protein
D VP2055 malonyl Coa-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VPA0971 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VP2056 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VP0884 putative 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VP2194 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VP2052 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VP0881 putative beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VP0882 putative beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPA0626 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VP2054 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPA1304 putative 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPA1117 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VP1591 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D VP2307 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VP1231 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPA0870 short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VP0870 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPA1152 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP0351 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP1964 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:vpa00071]
D VPA0620 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1123 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1204 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VP2209 fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VP0029 fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VP0030 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VP2208 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VP2289 oxidoreductase, acyl-CoA dehydrogenase family K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D VP1230 oxidoreductase, acyl-CoA dehydrogenase family K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D VP0870 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPA1152 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP0351 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP1964 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPA0071 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VP2121 alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPA0566 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:vpa00561]
D VPA0117 conserved hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VP0364 putative dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D VP0365 putative dihydroxyacetone kinase K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D VP0363 glycerol dehydrogenase GldH K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D VP2386 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VP2947 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VP2057 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D VP0410 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VP2657 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VP0195 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VPA1279 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VP1181 lactonizing lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D VP1163 putative alpha-1,6-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:vpa00564]
D VP2832 glycerol-3-phosphate dehydrogenase (NAD+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D VP2388 aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D VP2947 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VP0410 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VP2657 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D VP0195 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VPA1279 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D VPA0788 putative outer membrane phospholipase A precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VP1260 outer membrane phospholipase, chain A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VP2974 lysophospholipase L2 K01048 pldB; lysophospholipase [EC:3.1.1.5]
D VP2381 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VPA0146 putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D VP2313 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D VP2934 phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D VP2825 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D VP1943 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D VP0685 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D VPA0129 putative phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D VP1183 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D VPA0341 hypothetical protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:vpa00565]
D VPA0788 putative outer membrane phospholipase A precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VP1260 outer membrane phospholipase, chain A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:vpa00600]
D VP1163 putative alpha-1,6-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D VP0755 N,N'-diacetylchitobiase precursor K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VP2486 beta-N-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D VPA0788 putative outer membrane phospholipase A precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VP1260 outer membrane phospholipase, chain A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D VPA0788 putative outer membrane phospholipase A precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VP1260 outer membrane phospholipase, chain A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:vpa00592]
D VPA0788 putative outer membrane phospholipase A precursor K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VP1260 outer membrane phospholipase, chain A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D VP2209 fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VP0029 fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:vpa01040]
D VPA0707 putative delta-9 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D VPA0872 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D VP0949 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D VP1971 putative acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:vpa00230]
D VP0426 MutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPA1010 MutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VP0145 MutT/nudix family protein K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D VP2434 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D VP0839 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VP0739 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D VP2185 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VP2898 phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D VP2286 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VP1297 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D VP0666 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D VP2285 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D VP3037 phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D VP3036 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D VP1263 putative phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D VP1128 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VP2896 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VP2180 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VPA0855 putative 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VP0748 5'-nucleotidase precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VP1207 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VP2556 survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VPA0835 inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D VP1132 inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D VP0066 xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VP2433 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPA1475 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPA0057 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D VP0560 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VP2515 hypoxanthine ribosyl transferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D VP0616 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VP0604 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VP0554 conserved hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D VP2621 Ham1 protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D VP0673 xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D VP0617 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VPA1159 GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D VP0161 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D VP1934 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VP1935 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VPA0941 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D VP0925 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D VP0926 conserved hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D VP0159 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D VP3003 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VP0572 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D VP2564 GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D VP2987 adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D VP1760 putative adenylate cyclase K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D VPA0375 putative adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VP2812 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VP0116 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D VP0698 conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D VPA1292 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D VP0290 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VP0822 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VP2563 MazG protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VP0428 cyclic AMP phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D VP0334 bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D VP0296 adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D VP0293 sulfate adenylate transferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VP0292 sulfate adenylate transferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:vpa00240]
D VP0471 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VP0232 putative carbamoylphosphate synthase large subunit, short form K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VP0470 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VP2654 aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VP2655 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D VPA0408 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D VP1601 dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D VP0178 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D VP2026 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D VP2316 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D VP0604 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VP2563 MazG protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VP2688 Maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D VP1323 conserved hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D VP2562 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D VP2031 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D VP2067 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D VPA0855 putative 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VP0748 5'-nucleotidase precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VP1207 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VP2556 survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VPA0217 conserved hypothetical protein K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D VPA1079 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D VP0960 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D VPA0057 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D VP2284 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D VP0290 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D VP0698 conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D VP1298 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D VPA1243 putative cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VPA0941 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D VP1934 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VP1935 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D VP0926 conserved hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D VPA1192 putative deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D VP2049 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D VP2435 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D VP1151 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D VP0524 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:vpa00250]
D VPA0936 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VP2580 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VP2153 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VPA0374 periplasmic L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VP2781 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VP0826 asparagine synthetase B, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VP0927 putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VP2714 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VP1103 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D VP2863 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D VP2757 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VP2756 argininosuccinase and n-acetylglutamate synthase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D VPA0375 putative adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VP2812 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D VP1128 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D VP2654 aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D VP2655 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D VP1771 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VP2630 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VP1772 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VP0482 glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VP0484 glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VP0481 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VP0483 glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D VP1602 putative NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VPA1726 putative proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VP0121 glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VP0471 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VP0232 putative carbamoylphosphate synthase large subunit, short form K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D VP0470 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D VP2623 glutaminase family protein K01425 glsA; glutaminase [EC:3.5.1.2]
D VP0359 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VP2185 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:vpa00260]
D VP2547 aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VP2715 aspartokinase III, lysine-sensitive K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VP1719 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VP0494 aspartokinase I/homoserine dehydrogenase, threonine-sensitive K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VP2764 aspartokinase II/homoserine dehydrogenase, methionine-sensitive K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VP2124 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VP2192 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VP0495 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D VP0496 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D VPA1011 L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D VP0715 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPA0803 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VP2714 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VP2678 2-hydroxyacid dehydrogenase family protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D VPA0117 conserved hypothetical protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D VP2829 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D VP2593 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VP1247 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VP2431 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D VPA1510 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VPA1509 threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D VPA0801 glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VPA0805 glycine cleavage system protein T2 K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VP2517 dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPA0802 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D VP2934 phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D VPA1112 putative choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D VPA1113 betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D VPA0254 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VP1880 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VP3062 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VP1248 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VP2848 putative alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VP1961 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VP1960 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VPA0585 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VP1942 diaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VP1721 diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VP1722 L-2,4-diaminobutyric acid acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D VP1720 ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:vpa00270]
D VP2833 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VP0797 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VP0946 cysteine synthase/cystathionine beta-synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D VP1182 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VP2717 cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VP1974 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VP1991 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VP2606 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VP1967 putative homoserine lactone synthase VanM K13062 ainS; acyl homoserine lactone synthase [EC:2.3.1.184]
D VPA1089 putative 5'-methylthioadenosine/S-adenosylhomocysteine nuclosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D VP0479 MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D VP0560 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D VP1900 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VP1608 conserved hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D VP2537 autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VP2547 aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VP2715 aspartokinase III, lysine-sensitive K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VP1719 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VP0494 aspartokinase I/homoserine dehydrogenase, threonine-sensitive K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VP2764 aspartokinase II/homoserine dehydrogenase, methionine-sensitive K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VP2124 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VP2192 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VP1751 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D VP2765 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VP0629 homocysteine synthase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D VP3060 branched-chain amino acid amiotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VP2539 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D VP2611 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D VPA0936 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VP1200 putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPA1175 putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPA0147 Lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VP2848 putative alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VP0325 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D VPA0254 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VP1880 L-serine dehydratase 1 K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D VP2593 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VP1247 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:vpa00280]
D VP3060 branched-chain amino acid amiotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VPA0647 putative pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D VPA0646 putative pyruvate dehydrogenase E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D VPA0645 putative dihydrolipoamide acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D VP2517 dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPA0618 putative acyl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D VPA1125 putative acyl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D VP0030 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VP2208 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VP2209 fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VP0029 fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPA0625 putative 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D VPA1419 putative 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D VPA1118 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D VPA1122 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPA0621 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VP1771 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VPA1128 putative acyl-CoA carboxylase alpha chain K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D VPA0617 putative propionyl-CoA carboxylase (beta subunit) protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D VPA1126 putative acyl-CoA carboxyltransferase beta chain K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D VPA0616 putative enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D VPA1127 putative enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D VPA0615 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D VPA1129 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D VPA0575 acetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPA1158 acetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPA0620 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1123 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1204 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:vpa00290]
D VP3062 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D VP0343 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D VP0342 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D VP0344 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D VP0352 acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VP3058 acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VP0353 acetolactate synthase III, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VP3059 acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VP0035 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VP3061 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VP3060 branched-chain amino acid amiotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VP0019 valine-pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D VP0927 putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VP0346 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:vpa00300]
D VP2547 aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VP2715 aspartokinase III, lysine-sensitive K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VP1719 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VP0494 aspartokinase I/homoserine dehydrogenase, threonine-sensitive K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VP2764 aspartokinase II/homoserine dehydrogenase, methionine-sensitive K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VP2124 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VP2192 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VP2273 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VP0469 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D VP2380 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D VP2797 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VP2269 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VP2983 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VP2984 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VPA1662 putative diaminopimelate decarboxylase protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VPA0399 putative aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D VP0455 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VP0456 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:vpa00310]
D VP0848 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VP2517 dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VP0030 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VP2208 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPA0620 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1123 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1204 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VP2848 putative alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VP2890 lysine decarboxylase K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D VP1771 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VP2630 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VP1772 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VPA0190 putative transcriptional regulator K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13]
D VP1270 conserved hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:vpa00220]
D VP2653 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D VP2757 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VP2756 argininosuccinase and n-acetylglutamate synthase K14681 argHA; argininosuccinate lyase / amino-acid N-acetyltransferase [EC:4.3.2.1 2.3.1.1]
D VP2652 arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D VP2623 glutaminase family protein K01425 glsA; glutaminase [EC:3.5.1.2]
D VP0121 glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VP1602 putative NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VPA0936 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VP0927 putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VP2371 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D VP2758 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D VP2759 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D VP2797 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VP2760 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:vpa00330]
D VPA1243 putative cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D VPA0170 biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D VPA0169 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D VP1773 conserved hypothetical protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D VP1774 putative carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D VPA1635 ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D VP1941 putative carboxynorspermidine dehydrogenase K13746 cansdh; carboxynorspermidine synthase [EC:1.5.1.43]
D VP1940 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VPA0474 spermidine n1-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D VP2796 putative arginine/ornithine succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D VP2795 succinylglutamate 5-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D VP1310 succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D VP1781 putative glutamine synthetase K09470 puuA; gamma-glutamylputrescine synthase [EC:6.3.1.11]
D VP1775 putative oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D VP1777 putative aldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D VP2617 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D VPA1726 putative proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VP0676 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VP0677 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D VPA0936 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VP1333 ornithine cyclodeaminase Ocd2 K19742 lhpI; 1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.49]
C 00340 Histidine metabolism [PATH:vpa00340]
D VP1137 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D VP1144 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D VP1142 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D VP1141 amidotransferase HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D VP1143 imidazoleglycerol-phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D VP1140 imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D VP1139 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VP1138 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D VP0889 putative histidine ammonia-lyase protein K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D VP1273 histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D VP1274 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D VP1276 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D VP1275 formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:vpa00350]
D VPA0936 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VP1139 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VP1900 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VP1349 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VP1350 putative oxidoreductase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D VP1352 putative glutathione S-transferase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D VP1351 conserved hypothetical protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D VPA0071 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VP2121 alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VPA0566 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VP0240 putative 5-carboxymethyl-2-hydroxymuconate delta isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D VP2630 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VP1772 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:vpa00360]
D VPA0576 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D VPA0936 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VP1139 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VP1900 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VPA1487 putative acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D VP1349 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VP0623 D-amino acid dehydrogenase, small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D VPA0768 catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D VPA0453 catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:vpa00380]
D VP0848 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VP2517 dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VP0030 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VP2208 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPA0620 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1123 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1204 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA0192 tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VPA1418 catalase K03781 katE; catalase [EC:1.11.1.6]
D VPA0305 catalase K03781 katE; catalase [EC:1.11.1.6]
D VPA0768 catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D VPA0453 catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:vpa00400]
D VPA1185 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase, DAHP synthetase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VP0546 phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VP1616 3-deoxy-D-arabinoheptulosonate-7-phosphate (DAHP) synthetase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VP2744 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D VP2879 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D VP3033 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D VP2745 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D VP1020 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D VP2202 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D VP1956 anthranilate synthase, alpha subunit K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VP1957 anthranilate synthase, beta subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VP1958 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D VP1959 indole-3-glycerol phosphate synthase IgpS/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D VP1961 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D VP1960 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VPA0585 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D VP0547 chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D VP0555 chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D VP3065 putative cyclohexadienyl dehydratase precursor signal peptide protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D VPA0936 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VP1139 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VP1900 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VPA0576 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:vpa00410]
D VP1771 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D VP2507 pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VP0030 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VP2208 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPA1122 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D VPA0621 methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:vpa00430]
D VP3011 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VP1103 alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D VP1602 putative NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D VP2083 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D VPA0611 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D VP2082 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:vpa00440]
D VPA0233 phosphonoacetaldehyde phosphonohydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D VPA0235 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:vpa00450]
D VP2765 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D VP1182 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D VP2717 cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VP1974 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VP1991 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D VP1251 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D VP0293 sulfate adenylate transferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VP0292 sulfate adenylate transferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VP2069 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:vpa00460]
D VP3011 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VP2153 L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VPA0374 periplasmic L-asparaginase II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D VP2781 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VP0715 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPA0803 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:vpa00470]
D VPA1001 putative alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VP2734 alanine racemase, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D VPA0886 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VP2848 putative alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D VP2623 glutaminase family protein K01425 glsA; glutaminase [EC:3.5.1.2]
D VP2936 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D VP0458 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VPA0330 hypothetical protein K26272 dgcN; D-glutamate N-acetyltransferase [EC:2.3.1.312]
D VPA0329 putative muconate cycloisomerase I K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D VP1248 D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D VP2983 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D VP2984 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VPA1662 putative diaminopimelate decarboxylase protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D VP1330 proline racemase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D VP1331 D-amino acid dehydrogenase, small subunit K21060 lhpB; D-hydroxyproline dehydrogenase [EC:1.5.99.-]
D VP1335 probable dihydrodipicolinate synthetase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D VP1329 fatty aldehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D VP0623 D-amino acid dehydrogenase, small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:vpa00480]
D VP3011 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VPA0877 putative lactam utilization protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D VP2539 glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D VP2611 glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D VP2644 aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VP0603 peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D VP1604 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D VP0671 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VPA0642 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VPA1417 putative glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VP0068 glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D VP1011 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D VP1708 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D VP1710 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VPA1251 putative ABC transporter K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D VP2753 peroxiredoxin family protein/glutaredoxin K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D VPA1293 putative antioxidant K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D VPA1635 ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:vpa00511]
D VP2403 evolved beta-D-galactosidase; cryptic gene K12111 ebgA; evolved beta-galactosidase subunit alpha [EC:3.2.1.23]
D VP2404 evolved beta-D-galactosidase; cryptic gene K12112 ebgC; evolved beta-galactosidase subunit beta
D VP0755 N,N'-diacetylchitobiase precursor K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VP2486 beta-N-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VPA0357 putative beta-mannosidase precursor K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 00540 Lipopolysaccharide biosynthesis [PATH:vpa00540]
D VP2306 acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VP0465 UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VP2308 UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VP1148 conserved hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VP2305 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VP0983 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VP2666 putative polysialic acid capsule expression protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VP0747 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VP0984 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VP0211 KDO transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VP0179 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VP1745 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VP2509 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VP0213 putative lipid A biosynthesis (kdo)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D VP0993 conserved hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D VPA1280 conserved hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VP0196 conserved hypothetical protein K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D VP2288 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D VP0424 ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D VP0708 histidinol phosphatase-related protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D VP0214 ADP glyceromanno-heptose 6-epimerase GmhD K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D VP0212 ADP-heptose-LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:vpa00541]
D VP0237 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VP2711 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D VPA0879 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VP2400 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D VP0236 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D VP2023 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D VP0223 D-glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VP0222 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D VP0229 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D VP0224 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D VPA0967 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPA1425 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D VPA0535 putative phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D VP3067 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D VP0235 putative epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00550 Peptidoglycan biosynthesis [PATH:vpa00550]
D VP2658 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VP2932 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VP0461 UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D VP0458 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VP0455 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VPA0886 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VP0456 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D VP2314 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VP0413 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VP0348 conserved hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VP0457 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VP0460 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D VPA1617 putative transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D VP2751 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VP2497 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VP0722 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VP0454 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VP0719 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPA1594 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPA1296 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VP2468 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:vpa00552]
D VP0413 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VP0348 conserved hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VP0235 putative epimerase/dehydratase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D VP1322 putative LicD1 protein K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:vpa00543]
D VPA1403 putative capsular polysaccharide biosynthesis glycosyltransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D VP2833 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:vpa00730]
D VP3027 thiamin biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D VPA0136 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D VP3025 ThiF protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D VP0596 aminotransferase NifS, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VP0691 thiamin biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VP3022 ThiH protein K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D VP0686 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VP3023 ThiG protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D VPA0131 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D VP3026 thiamin-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D VPA0130 putative thiamine monophosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D VP0684 thiamin-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D VP2824 putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VPA1629 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VPA1073 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VP2163 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VP0822 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VPA0132 putative transcriptional activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:vpa00740]
D VPA0006 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VP1921 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VP0681 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D VP0679 riboflavin-specific deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VP2980 conserved hypothetical protein K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D VPA1250 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D VP0682 riboflavin synthase, beta subunit K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D VP0680 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D VP1480 riboflavin synthase, alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D VP0533 riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D VP2995 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D VPA1601 NADPH-flavin oxidoreductase K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D VPA0131 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D VP0426 MutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VPA1010 MutT/nudix family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D VP0315 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:vpa00750]
D VPA1730 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D VPA1632 putative pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D VP1366 putative pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D VP2601 erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D VP2193 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D VP1247 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D VP0337 pyridoxal phosphate biosynthetic protein PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D VP2569 pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D VP0496 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:vpa00760]
D VP2580 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D VP1063 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D VP2522 NadC K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D VPA0309 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D VP0066 xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VP2433 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPA1475 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D VPA0855 putative 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D VP0748 5'-nucleotidase precursor K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VP1207 UDP-sugar hydrolase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D VP2556 survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D VPA0413 conserved hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D VP2563 MazG protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VP2919 MutT/nudix family K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D VPA0412 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D VP2551 CinA-related protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D VPA0307 putative pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D VP1524 nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D VP0650 conserved hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D VP2942 pyridine nucleotide-disulfide oxidoreductase, class I K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D VPA0922 NAD(P) transhydrogenase, alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D VPA0921 NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D VP2630 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D VP1772 succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:vpa00770]
D VP0352 acetolactate synthase III, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VP3058 acetolactate synthase II, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D VP0353 acetolactate synthase III, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D VP3059 acetolactate synthase II, small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D VP0035 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D VP3061 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D VP2506 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D VP2363 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D VP2507 pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D VP0181 DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D VP2563 MazG protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D VP0190 lipopolysaccharide core biosynthesis protein KdtB K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D VP2527 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D VP2568 holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D VPA0844 conserved hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D VP3060 branched-chain amino acid amiotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VP1237 putative glutamate decarboxylase K24264 panP; aspartate 1-decarboxylase [EC:4.1.1.11]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:vpa00780]
D VP1115 biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D VP0884 putative 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VP2194 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VP2052 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VP0881 putative beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VP0882 putative beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPA0626 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VP2054 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPA1304 putative 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPA1117 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VP2307 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VP0148 BioH protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D VP1114 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VP1112 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VP1116 dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D VP1113 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D VP2931 BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:vpa00785]
D VP0717 lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D VP0716 lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D VP2517 dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VP2519 pyruvate dehydrogenase, E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D VP2518 pyruvate dehydrogenase, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D VP0847 2-oxoglutarate dehydrogenase, E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D VP0848 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D VPA0647 putative pyruvate dehydrogenase E1 component, alpha subunit K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D VPA0646 putative pyruvate dehydrogenase E1 component, beta subunit K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D VPA0645 putative dihydrolipoamide acetyltransferase K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D VPA0801 glycine cleavage system P protein K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D VPA0805 glycine cleavage system protein T2 K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VPA0802 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:vpa00790]
D VPA1169 GTP cyclohydrolase K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D VPA1073 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VP2163 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VP1262 putative alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D VPA0758 putative pyrophosphohydrolase, MutT family K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D VP0411 putative dihydroneopterin aldolase FolB K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D VP2505 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D VP0412 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D VP2462 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D VP0333 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VP2188 folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D VPA0006 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VP1921 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VP0681 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D VP2798 para-aminobenzoate synthase glutamine amidotransferase, component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D VP1875 para-aminobenzoate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D VP2051 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D VP1883 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VPA0577 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D VPA0576 phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D VP1639 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VP1638 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VP0701 conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VP2096 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VP2094 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VP2092 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VP2095 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VPA1170 molybdopterin biosynthesis MoeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D VP1496 molybdopterin biosynthesis MoeA protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D VP1497 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:vpa00670]
D VP0333 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D VPA0834 formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D VP0879 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D VP0715 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VPA0803 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D VP2286 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D VP2896 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VP3043 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VPA0805 glycine cleavage system protein T2 K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D VP2717 cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D VP0524 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D VP0864 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D VP2763 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D VP2591 putative 5-formyltetrahydrofolate cyclo-ligase-family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:vpa00860]
D VP0762 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VP0742 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D VP2475 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VP0205 putative glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VP0104 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VP2988 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D VP2989 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D VP2916 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D VP3034 coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D VP0115 oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D VP0033 protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D VP0823 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D VP2990 putative uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VP0291 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VPA1064 putative siroheme synthase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VPA0984 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D VP1619 uroporphyrin-III C-methyltransferase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D VPA0544 putative cytochrome c oxidase assembly factor K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPA0631 putative protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPA0543 putative cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D VP2065 cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D VPA0932 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D VP0478 putative cobalamin biosynthesis protein CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D VP1306 cobinamide kinase/cobinamide phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D VP1305 cobalamin (5'-phosphate) synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D VP1304 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D VP1307 putative alpha-ribazole-5'-phosphate phosphatase CobC K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D VPA0429 conserved hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D VP2768 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:vpa00130]
D VP2949 chorismate-pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D VP2948 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D VP2997 conserved hypothetical protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D VP0315 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VP2586 VisC protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D VP1933 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D VP2587 UbiH protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D VP0095 ubiquinone/menaquinone biosynthesis methlytransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D VP0735 VisC-related protein K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D VP0928 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D VP0929 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase/2-oxoglutarate decarboxylase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D VP0930 conserved hypothetical protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D VP0932 o-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D VP0933 o-succinylbenzoic acid-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D VP0931 naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D VPA0862 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D VP0248 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D VP2280 Trp repressor-binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D VPA1738 putative tryptophan repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D VP1349 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:vpa00900]
D VP0686 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D VP2312 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D VP2559 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D VP1320 putative CDP-ribitol pyrophosphorylase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D VP0740 kinase, GHMP family K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D VP2558 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase MeCPs K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D VP0608 GcpE protein K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D VP0537 LytB protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D VPA0620 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1123 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1204 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA0968 3-hydroxy-3-methylglutaryl CoA reductase K00021 HMGCR; hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]
D VP0315 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D VPA0278 putative isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D VP0687 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D VP0327 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VP2314 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:vpa00907]
D VP0030 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VP2208 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VPA0615 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D VPA1129 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D VP2209 fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VP0029 fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D VPA1181 transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D VP2605 transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:vpa00523]
D VP0223 D-glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VP0222 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D VP0229 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D VP0224 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D VP0928 menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D VP0222 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:vpa00332]
D VP0676 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D VP0677 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:vpa00261]
D VP0293 sulfate adenylate transferase, subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D VP0292 sulfate adenylate transferase, subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D VP2547 aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VP2715 aspartokinase III, lysine-sensitive K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VP1719 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D VP0494 aspartokinase I/homoserine dehydrogenase, threonine-sensitive K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D VP2764 aspartokinase II/homoserine dehydrogenase, methionine-sensitive K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D VP2124 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VP2192 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D VP2273 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D VP0469 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:vpa00521]
D VP0839 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D VP0593 inositol monophosphate family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D VP0223 D-glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VP0222 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D VP0229 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D VP0224 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:vpa00525]
D VP0223 D-glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D VP0222 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:vpa00401]
D VP0547 chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D VPA0936 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VP1139 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VP1900 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D VP1956 anthranilate synthase, alpha subunit K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VP1957 anthranilate synthase, beta subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D VP2055 malonyl Coa-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VP0882 putative beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPA0626 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VP2054 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPA1304 putative 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPA1117 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D VP0894 putative acyl carrier protein K02078 acpP; acyl carrier protein
D VP2053 acyl carrier protein K02078 acpP; acyl carrier protein
D VP0895 putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:vpa00999]
D VP2606 S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D VP3033 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:vpa00362]
D VP0409 putative beta-ketoadipate enol-lactone hydrolase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D VP2209 fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VP0029 fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VPA0640 putative protocatechuate 3,4-dioxygenase beta chain protein K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D VPA1141 gamma-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D VP2208 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D VP0030 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VP2543 oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VPA0620 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1123 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1204 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:vpa00627]
D VP1627 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D VP0315 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:vpa00364]
D VPA1061 putative enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:vpa00625]
D VPA0566 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPA0071 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VP2121 alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D VP1776 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:vpa00361]
D VPA1061 putative enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:vpa00623]
D VPA1061 putative enzyme K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation [PATH:vpa00633]
D VPA1591 oxygen-insensitive NAD(P)H nitroreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34]
D VPA0385 N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D VPA0773 N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D VP2209 fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D VP0029 fatty oxidation complex, beta subunit K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:vpa00643]
D VP1350 putative oxidoreductase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D VP1352 putative glutathione S-transferase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D VP1351 conserved hypothetical protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:vpa00930]
D VP0030 fatty oxidation complex, alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D VP2208 fatty oxidation complex, alpha subunit K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:vpa00626]
D VPA0566 alcohol dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D VPA0071 putative alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D VP2121 alcohol dehydrogenase/acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D VPA0640 putative protocatechuate 3,4-dioxygenase beta chain protein K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:vpa03020]
D VP2922 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VP2921 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VP0282 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VP0160 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:vpa03010]
D VP2030 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D VP2318 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D VP0263 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D VP0281 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D VP0274 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D VP2740 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D VP2772 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D VP0271 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D VP0439 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D VP0256 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D VP0280 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D VP2773 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D VP0279 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D VP0270 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D VP2453 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D VP2533 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D VP0266 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D VP2738 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D VP0261 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D VP0531 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D VP0407 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D VP2925 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D VP0260 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D VP0257 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D VP0258 ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D VP0269 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D VP0272 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D VP2923 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D VP2737 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D VP2924 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D VP2926 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D VP0438 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D VP0267 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D VP0276 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D VP0264 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D VP0283 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D VP0273 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D VP2530 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D VP1282 large subunit ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D VP0328 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D VP0262 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D VP0259 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D VP0268 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D VP1210 ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D VP0329 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D VP0185 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D VP0265 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D VP0275 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D VP0255 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D VP2331 ribosomal protein, L31P family K02909 RP-L31; large subunit ribosomal protein L31
D VP2058 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D VP0186 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D VP0005 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D VP1281 large subunit ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D VP0278 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D 16Sd 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sa 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sk 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Si-2 16Si; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sg 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sl 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Si-1 16Si; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sf 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sj 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sb 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Se 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23Sb 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Se 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sa 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sf 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Si 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sh 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sg 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sk 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sd 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sj 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sl 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 5Sa 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sj 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Se 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sk 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sh 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sl 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sd 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sg 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sf 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Si 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sb 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sc 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:vpa00970]
D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-5 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-10 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-11 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-6 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-7 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-8 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-9 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-3 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-4 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-5 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-4 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-5 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-6 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys-1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Cys-2 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Cys-3 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Cys-4 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-3 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-4 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-5 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-6 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-4 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-5 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-6 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-11 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-13 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-10 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-6 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-7 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-8 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-9 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His-1 tRNA-His K14226 tRNA-His; tRNA His
D tRNA-His-2 tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-10 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-7 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-8 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-9 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-15 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-16 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-11 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-12 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-14 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-13 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-3 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-4 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-10 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-11 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-4 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-5 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-6 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-7 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-8 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-9 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-2 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-3 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-4 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-6 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-6 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-5 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-4 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-7 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp-1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Trp-2 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-2 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-3 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-4 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-5 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-6 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-7 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-4 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-5 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-6 tRNA-Val K14237 tRNA-Val; tRNA Val
D VP0762 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VP0832 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VP2548 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VP0613 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VP1047 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VP1893 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VP0022 glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VP0021 glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VP1280 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VP1108 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VP1150 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VP2069 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VP3043 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D VP2646 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VP0727 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VP0534 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VP0513 lysyl-tRNA synthetase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VP0861 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VP2333 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VP0609 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VP1290 phenylalanyl-tRNA synthetase, alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VP1291 phenylalanyl-tRNA synthetase, beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VP2470 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPA0368 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VP1096 putative tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VP2804 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:vpa03060]
D VP0277 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D VP2928 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D VP2460 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D VP0590 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPA1209 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VP0591 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPA1208 putative protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VP0589 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D VP0003 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VP0467 SecA protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VP2831 protein-transport protein SecB K03071 secB; preprotein translocase subunit SecB
D VP2534 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VP2956 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VP0098 TatA protein K03116 tatA; sec-independent protein translocase protein TatA
D VP0099 conserved hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D VP0100 conserved hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D VP2573 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D VP0535 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:vpa04122]
D VP0596 aminotransferase NifS, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VP1200 putative thiosulfate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VPA1175 putative thiosulfate sulfurtransferase SseA K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D VP0025 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VP2774 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D VP2775 putative oxidation of intracellular sulfur K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D VP2776 conserved hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D VP1626 sulfite reductase, gamma subunit-related protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D VP1130 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VP2092 molybdenum cofactor biosynthesis protein E K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D VP2096 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D VP2093 molybdenum cofactor biosynthesis protein D K03636 moaD; sulfur-carrier protein
D VPA1171 molybdopterin biosynthesis MoeB protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D VP2094 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D VP2095 molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D VP0691 thiamin biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VP3024 ThiS protein K03154 thiS; sulfur carrier protein
D VP3025 ThiF protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:vpa03018]
D VP0520 MutT/nudix family protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D VP2062 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VP3002 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D VP2561 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VP2452 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VPA0845 ATP-dependent RNA helicase, DEAD box family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPA0390 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VP0903 RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VP2807 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VP1890 putative virulence-associated protein VacB/RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VPA0608 ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VP3007 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VP2340 putative ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VP3000 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VP2855 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VP0653 DnaK protein K04043 dnaK; molecular chaperone DnaK
D VP2851 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPA0287 chaperonin, 60 kDa subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VP2817 putative host factor-I K03666 hfq; host factor-I protein
D VP0573 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VP0578 conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VP2504 polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:vpa03030]
D VPA0793 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2877 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2292 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP1903 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP1724 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPA0074 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2303 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VP2179 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VP2048 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VP0725 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VP2442 DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VP2645 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VP0012 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VP2735 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VP0405 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VP2709 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D VPA0440 putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VP2293 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VP0642 putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VP2304 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D VP0107 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VP0800 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:vpa03410]
D VP2108 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VP0500 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D VP2626 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VP0189 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VPA0045 ada regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VP1179 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D VP1003 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D VP0498 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VP0107 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VP0511 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VP0800 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:vpa03420]
D VP0975 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VP2712 excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D VP2100 excinuclease ABC, subunit B K03702 uvrB; excinuclease ABC subunit B
D VP1944 excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D VP3013 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VP0107 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VP0800 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:vpa03430]
D VP2552 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VP2819 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D VP0518 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH
D VP3013 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VP1301 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D VP0615 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VP0688 exodeoxyribonuclease, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VP0511 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VP2709 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D VP2303 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VP0012 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VP2179 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VP0725 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VP2048 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPA0793 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2877 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2292 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP1903 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP1724 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPA0074 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2645 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VP2442 DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VP0800 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VP2742 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:vpa03440]
D VP0511 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VP2709 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D VP0013 RecF protein K03629 recF; DNA replication and repair protein RecF
D VP2570 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VP2177 recombination protein RecR K06187 recR; recombination protein RecR
D VP2550 RecA protein K03553 recA; recombination protein RecA
D VP0107 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VP1051 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VP1052 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VP1048 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VP0157 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VP2374 exodeoxyribonuclease V, 135 kDa subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D VP2375 exodeoxyribonuclease V, 125 kDa subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D VPA1266 putative ATP-dependent exoDNAse (exonuclease V), alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VP2373 exodeoxyribonuclease V, 67 kDa subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VP2303 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VP0012 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VP2179 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VP0725 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VP2048 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPA0793 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2877 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2292 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP1903 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP1724 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPA0074 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2645 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VP2442 DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VP0253 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VP2739 primosomal replication protein N K02686 priB; primosomal replication protein N
D VP1005 primosomal replication protein N'' K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:vpa03250]
D VP2355 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:vpa02010]
D VP1501 conserved hypothetical protein K05772 tupA; tungstate transport system substrate-binding protein
D VP1499 ABC transporter, permease protein K05773 tupB; tungstate transport system permease protein
D VP1498 ABC transporter, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D VPA1058 putative nitrate transport protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VPA1057 putative nitrate transporter K15577 nrtB; nitrate/nitrite transport system permease protein
D VPA1056 nitrate transporter ATPase component NasD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VPA0133 putative ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D VPA0134 ABC transporter permease protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D VPA0135 putative ABC transporter, ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D VPA0931 molybdenum ABC transporter, periplasmic molybdenum-binding protein K02020 modA; molybdate transport system substrate-binding protein
D VPA0930 molybdenum ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D VPA0929 molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VPA0595 ATP-binding component of molybdate transport system K05776 modF; molybdate transport system ATP-binding protein
D VP2491 iron(III) ABC transporter, periplasmic iron-compound-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VPA0236 ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VP2490 iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VPA0239 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VP2489 iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VPA0238 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VP0316 thiamin ABC transporter, periplasmic thiamin-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D VP0317 putative thiamine ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D VP0318 putative thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D VP1525 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VP1526 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPA0367 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VP1527 spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D VP1528 spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D VP1529 spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D VP1728 ABC superfamily (glycine/betaine/proline transport protein) K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VPA1111 putative glycine betaine-binding ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VP1727 glycine betaine/L-proline transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D VPA1110 putative permease of ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D VPA1109 putative ATP-binding component of ABC transporter K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VP1726 ABC superfamily (glycine/betaine/proline transport protein) K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VPA1401 maltose ABC transporter, periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VPA1400 maltose ABC transporter, permease protein K10109 malF; maltose/maltodextrin transport system permease protein
D VPA1399 maltose ABC transporter, permease protein K10110 malG; maltose/maltodextrin transport system permease protein
D VPA1402 maltose/maltodextrin ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VP2661 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D VP2662 putative ABC superfamily transport protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VP1364 possible ABC transport system periplasmic substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VP2663 putative ABC superfamily transport protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VP1361 putative ABC transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VP2660 putative anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D VP2664 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VP1363 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VPA1663 putative binding protein component of ABC sugar transporter K17315 gtsA; glucose/mannose transport system substrate-binding protein
D VPA1084 ribose ABC transporter, periplasmic D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D VPA1085 ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D VPA1086 ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VPA1087 ribose ABC transporter protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D VPA1673 L-arabinose-binding periplasmic protein precursor K10537 araF; L-arabinose transport system substrate-binding protein
D VPA1671 ABC-type arabinose transport system, permease component K10538 araH; L-arabinose transport system permease protein
D VPA1672 L-arabinose transport ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D VPA0604 ABC transporter, periplasmic substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VP0571 putative phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VPA1461 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VP0574 phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D VPA1460 phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D VP0575 phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D VPA1459 phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D VP0576 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VPA1458 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VPA0637 arginine ABC transporter, periplasmic arginine-binding protein K09997 artI; arginine transport system substrate-binding protein
D VPA0639 arginine ABC transporter, permease protein K09998 artM; arginine transport system permease protein
D VPA0638 arginine ABC transporter, permease protein K09999 artQ; arginine transport system permease protein
D VPA0636 arginine ABC transporter, ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D VP1620 amino acid ABC transporter, periplasmic amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D VP1621 amino acid ABC transporter, permease protein K09970 aapQ; general L-amino acid transport system permease protein
D VP1622 amino acid ABC transporter, permease protein K09971 aapM; general L-amino acid transport system permease protein
D VP1623 amino acid ABC transporter, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VP0008 amino acid ABC transporter, periplasmic amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D VP0007 amino acid ABC transproter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D VP0006 amino acid ABC transporter, ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D VP0999 amino acid ABC transporter, periplasmic amino acid-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D VP1001 amino acid ABC transporter, permease protein K10023 aotM; arginine/ornithine transport system permease protein
D VP1000 amino acid ABC transporter, permease protein K10024 aotQ; arginine/ornithine transport system permease protein
D VP0998 amino acid ABC transporter, ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D VPA1149 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VPA1151 putative ABC transporter, membrane spanning protein K01997 livH; branched-chain amino acid transport system permease protein
D VPA1150 putative high-affinity branched-chain amino acid transport permease protein K01998 livM; branched-chain amino acid transport system permease protein
D VPA1153 putative high-affinity branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VPA1148 putative high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VP0704 lipoprotein YaeC K02073 metQ; D-methionine transport system substrate-binding protein
D VP0379 putative ABC transporter substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D VP0705 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D VP0706 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D VP2091 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VP1347 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VPA1739 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VP2090 oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D VP1346 oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D VP2089 oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D VP1345 oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D VP2088 oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D VP1344 oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D VPA1495 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VP2087 oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VP1343 oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VP1171 peptide ABC transporter, periplasmic peptide-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D VP1170 peptide ABC transporter, permease protein K19227 sapB; cationic peptide transport system permease protein
D VP1169 peptide ABC transporter, permease protein K19228 sapC; cationic peptide transport system permease protein
D VP1168 peptide ABC transporter, ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D VP1167 peptide ABC transporter, ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D VP0172 putative binding protein component of ABC transporter K13893 yejA; microcin C transport system substrate-binding protein
D VP2025 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein
D VP0170 putative transmembrane ABC transporter protein K13894 yejB; microcin C transport system permease protein
D VP0171 putative peptide ABC transporter, permease protein K13895 yejE; microcin C transport system permease protein
D VPA1655 putative FecB K23181 fecB; ferric citrate transport system substrate-binding protein
D VPA1653 putative ferrichrome ABC transporter (permease) K23182 fecD; ferric citrate transport system permease protein
D VPA1654 putative ferrichrome ABC transporter (permease) K23183 fecC; ferric citrate transport system permease protein
D VPA1652 ATP-binding component of citrate-dependent iron(III) transport protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D VPA1437 iron(III) ABC transporter, periplasmic iron-compound-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D VPA1438 iron(III) ABC transporter, permease protein K23228 fhuB; ferric hydroxamate transport system permease protein
D VPA1436 iron(III) ABC transporter, ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D VP0477 conserved hypothetical protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D VP1311 putative vitamin B12 ABC transporter, permease protein BtuC K06073 btuC; vitamin B12 transport system permease protein
D VP1312 putative vitamin B12 ABC transporter, ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D VP0853 zinc ABC transporter, periplasmic zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D VPA0162 putative adhesion protein K09815 znuA; zinc transport system substrate-binding protein
D VP0851 zinc ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D VPA0164 putative permease of ABC transporter K09816 znuB; zinc transport system permease protein
D VP0852 zinc ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VPA0163 putative ATP-binding component of ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VPA1483 putative ABC transporter membrane-spanning permease K16785 ecfT; energy-coupling factor transport system permease protein
D VP0977 conserved hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D VP0979 conserved hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D VP0978 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VP2220 heme exporter protein D K02196 ccmD; heme exporter protein D
D VP2221 heme exporter protein C K02195 ccmC; heme exporter protein C
D VP2222 heme exporter protein B K02194 ccmB; heme exporter protein B
D VP2223 heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D VP2643 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D VP2642 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D VP2669 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VP2954 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VP2955 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VP0982 transport ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VP1432 ATP-binding component of a transport system K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D VP1431 putative ATP-binding component of a transport system K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPA1715 ABC transporter, ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPA1434 putative hemolysin secretion ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPA1736 toxin secretion ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VPA1444 putative transport protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D VP1249 transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D VP1250 transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D VPA0224 putative ABC transporter, ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:vpa02060]
D VP0794 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VP0795 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D VP0366 putative phosphoenolpyruvate-protein phosphotransferase (phosphotransferase system, enzyme I) K02784 ptsH; phosphocarrier protein HPr
D VP0793 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPA1667 PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VP2046 PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VP0831 PTS system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VP0710 PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VPA1744 putative PTS system, sucrose-specific IIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VPA0500 putative PTS system, mannitol-specific enzyme II component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D VPA0501 mannitol-specific PTS system enzyme II component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VP0370 PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VP2635 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VP2637 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VP2636 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VPA0231 phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VPA0230 putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VPA0229 putative membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D VPA0813 PTS system, fructose-specific IIA/FPR component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D VPA0811 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VPA1421 PTS system, fructose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VPA0298 PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VPA0812 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D VP0521 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D VP2674 phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D VP2672 nitrogen regulatory IIA protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VPA1422 putative PTS system, nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:vpa03070]
D VP0425 outer membrane protein TolC K12340 tolC; outer membrane protein
D VP1694 type III export protein YscF K03221 yscF; type III secretion protein F
D VP1669 putative type III secretion protein YscO K04056 yscO; type III secretion protein O
D VP1670 putative translocation protein in type III secretion K04057 yscP; type III secretion protein P
D VP1664 putative type III secretion protein K04059 yscX; type III secretion protein X
D VP1696 putative type III secretion protein YscC K03219 yscC; type III secretion protein C
D VPA1339 putative type III secretion system EscC protein K03219 yscC; type III secretion protein C
D VP1667 putative outer membrane protein PopN K04058 yscW; type III secretion protein W
D VP1690 putative type III secretion lipoprotein K03222 yscJ; type III secretion protein J
D VP1672 translocation protein in type III secretion K03226 yscR; type III secretion protein R
D VP1673 translocation protein in type III secretion K03227 yscS; type III secretion protein S
D VP1674 translocation protein in type III secretion K03228 yscT; type III secretion protein T
D VP1675 translocation protein in type III secretion K03229 yscU; type III secretion protein U
D VP1662 low calcium response protein K03230 yscV; type III secretion protein V
D VPA1355 putative type III secretion system EscV protein K03230 yscV; type III secretion protein V
D VP1668 ATP synthase in type III secretion system K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D VPA1338 putative ATPase YscN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D VP1671 putative translocation protein in type III secretion K03225 yscQ; type III secretion protein Q
D VP1688 putative type III secretion protein K03223 yscL; type III secretion protein L
D VP0133 general secretion pathway protein D precursor K02453 gspD; general secretion pathway protein D
D VP0132 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VP0135 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VP0136 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VP0137 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VP0138 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VP0139 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VP0140 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VP0141 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VP0142 general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D VP0134 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VP0590 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPA1209 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VP0591 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPA1208 putative protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VP2928 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D VP2460 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D VP0277 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D VP0589 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D VP0003 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VP0467 SecA protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VP2956 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VP2831 protein-transport protein SecB K03071 secB; preprotein translocase subunit SecB
D VP2534 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VP0098 TatA protein K03116 tatA; sec-independent protein translocase protein TatA
D VP0099 conserved hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D VP0100 conserved hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
D VP1394 putative VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VPA1026 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VP1393 BfdA K11903 hcp; type VI secretion system secreted protein Hcp
D VPA1027 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D VP1412 hypothetical protein K11906 vasD; type VI secretion system protein VasD
D VPA1042 hypothetical protein K11906 vasD; type VI secretion system protein VasD
D VPA1039 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D VP1408 putative IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D VP1414 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D VPA1040 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D VPA1028 putative ClpA/B-type chaperone K11907 vasG; type VI secretion system protein VasG
D VP1392 putative ClpA/B-type protease K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:vpa02020]
D VP0570 histidine protein kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VP0569 DNA-binding response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VPA1073 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VP2163 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VP1262 putative alkaline phosphatase K01113 phoD; alkaline phosphatase D [EC:3.1.3.1]
D VPA0604 ABC transporter, periplasmic substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VP0571 putative phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VPA1461 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VP0155 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VP0154 transcriptional regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D VP2859 sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VP2858 transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VPA1277 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VPA1276 putative DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D VP0433 protease DO K04771 degP; serine protease Do [EC:3.4.21.107]
D VP0362 putative two component sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VP0361 putative two component response regulator transcription regulator protein K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VPA0481 putative cation efflux system transmembrane protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D VPA0480 putative cation efflux system transmembrane protein K07787 cusA; copper/silver efflux system protein
D VP1735 putative two-component sensor K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VP1734 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VP0788 polar flagellin FlaC K02406 fliC; flagellin
D VP0790 polar flagellin FlaD K02406 fliC; flagellin
D VP2259 polar flagellin D K02406 fliC; flagellin
D VP0791 polar flagellin FlaE K02406 fliC; flagellin
D VPA1548 lateral flagellin LafA K02406 fliC; flagellin
D VP2258 polar flagellin FlaA K02406 fliC; flagellin
D VP2261 polar flagellin F K02406 fliC; flagellin
D VPA1555 flagellar-specific transcription initiation factor sigma, LafS K02405 fliA; RNA polymerase sigma factor FliA
D VP2232 flagellar-specific RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D VP0689 sodium-driven polar flagellar protein MotA K02556 motA; chemotaxis protein MotA
D VPA1556 chemotaxis LafT protein K02556 motA; chemotaxis protein MotA
D VPA1432 putative two-component response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VPA0675 sensor protein TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VP1032 DNA-binding response regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D VP1161 cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VP1162 trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VP1031 TorD protein K03533 torD; TorA specific chaperone
D VP0487 sensor histidine kinase FexB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VP0489 aerobic respiration control protein FexA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D VP1653 putative tricarboxylic transport TctA K07793 tctA; putative tricarboxylic transport membrane protein
D VP1652 putative tricarboxylic transport TctB K07794 tctB; putative tricarboxylic transport membrane protein
D VP1651 putative tricarboxylic transport TctC K07795 tctC; putative tricarboxylic transport membrane protein
D VPA0543 putative cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D VP0011 chromosomal DNA replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D VPA0764 putative transcriptional regulator CitB K07702 dpiA; two-component system, CitB family, response regulator CitB
D VPA0981 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D VP1258 malate oxidoreductase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D VP1907 transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D VPA1196 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VPA1195 nitrate/nitrite response regulator protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D VP2840 fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D VP2841 fumarate reductase, iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D VP2842 fumarate reductase, 15 kDa hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D VP2843 fumarate reductase, 13 kDa hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D VPA0966 regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VPA0824 putative regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VPA0965 putative sensor histidine protein kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D VPA0964 response regulator (repressor) in two-component regulatory system with UhpB (LuxR/UhpA family) K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D VPA0963 MFS family, hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D VP2567 sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VP1945 transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VP2546 carbon storage regulator K03563 csrA; carbon storage regulator
D VPA0736 putative sensory box sensor histidine kinase/response regulator VieS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VPA0738 putative fimbrial protein Z, transcriptional regulator (LuxR/UhpA family) K07690 evgA; two-component system, NarL family, response regulator EvgA
D VPA0741 putative fimbrial protein Z, transcriptional regulator (LuxR/UhpA family) K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D VPA1503 CsuE K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPA1507 CsuA K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPA1506 CsuB K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPA1505 CsuC K07346 fimC; fimbrial chaperone protein
D VPA1504 CsuD K07347 fimD; outer membrane usher protein
D VP2423 putative fimbrial protein K02651 flp; pilus assembly protein Flp/PilA
D VPA0719 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D VP2420 putative pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D VPA0720 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D VP2419 putative pilus assembly transmembrane protein K02280 cpaC; pilus assembly protein CpaC
D VPA0721 rough colony protein RcpA K02280 cpaC; pilus assembly protein CpaC
D VP2413 putative pilus assembly protein K02282 cpaE; pilus assembly protein CpaE
D VPA0723 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D VPA0724 TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VP2412 putative pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VPA0725 putative TadB K12510 tadB; tight adherence protein B
D VP2411 putative tight adherence TadB-related transmembrane protein K12510 tadB; tight adherence protein B
D VPA0726 putative TadC K12511 tadC; tight adherence protein C
D VP2410 putative tight adherence TadC-related transmembrane protein K12511 tadC; tight adherence protein C
D VP2320 protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D VP2299 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D VP0119 nitrogen regulation protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VP0118 nitrogen regulation protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VP0121 glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VPA0620 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1123 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1204 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA0825 putative phosphoglycerate transport regulatory protein PgtC K08478 pgtC; phosphoglycerate transport regulatory protein PgtC
D VPA0826 putative phosphoglycerate transport regulatory protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VPA0827 phosphoglycerate transport system transcriptional regulatory protein PgtA K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D VP0915 C4-dicarboxylate transport sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPA1731 putative C4-dicarboxylate transport sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VP0914 C4-dicarboxylate transport transcriptional regulatory protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VPA0183 C4-dicarboxylate transport transcriptional regulatory protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VP2670 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D VP2523 type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D VP0774 chemotaxis methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VPA1189 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1904 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1892 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0511 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1486 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0491 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP0963 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP0421 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1651 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0554 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0842 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1462 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1449 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1185 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VP1088 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VP0183 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1492 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0562 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VPA0024 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0612 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VP1628 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1981 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP2629 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP2827 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP2159 putative methyl-accepting chemotaxis transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0596 putative methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VPA1182 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VP2225 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VP2226 conserved hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D VP2229 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VP2231 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VP1376 putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VP2228 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VP0773 chemotaxis CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPA0431 putative chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPA0746 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VP2037 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPA1221 LuxP protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VPA1220 sensor protein LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPA0710 sensor histidine kinase/response regulator LuxN K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VP1968 sensor protein LuxN K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D VP2098 phosphorelay protein K10911 luxU; two-component system, phosphorelay protein LuxU
D VP2099 LuxO repressor protein K10912 luxO; two-component system, repressor protein LuxO
D VP2516 OpaR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VP0910 C4-dicarboxylate-binding periplasmic protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D VP0911 putative C4-dicarboxylate transport protein DctQ K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D VP0912 C4-dicarboxylate transport protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D VP2010 putative tetrathionate reductase complex: sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VP1201 putative sensor-kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VP2009 putative tetrathionate reductase complex: response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D VP1202 putative two-component response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D VP2014 putative tetrathionate reductase, subunit A K08357 ttrA; tetrathionate reductase subunit A
D VP2011 tetrathionate reductase, subunit B K08358 ttrB; tetrathionate reductase subunit B
D VP2013 putative tetrathionate reductase complex, subunit C K08359 ttrC; tetrathionate reductase subunit C
D VP2253 polar flagellar protein FlaK K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VP2252 FlaL K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VP2251 FlaM K10943 flrC; two-component system, response regulator FlrC
D VP2793 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VP1962 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VP2623 glutaminase family protein K01425 glsA; glutaminase [EC:3.5.1.2]
D VP0441 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D VP0442 ubiquinol-cytochrome c reductase, cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VP0443 ubiquinol-cytochrome c reductase, cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D VPA1144 hypothetical protein K08738 CYC; cytochrome c
D VP1544 cytochrome c oxidase, subunit CcoN K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D VP1543 cytochrome c oxidase, subunit CcoO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D VP1542 cytochrome c oxidase, subunit CcoQ K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D VP1541 cytochrome c oxidase, subunit CcoP K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D VP1053 cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VPA1137 cytochrome BD2, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D VP1054 cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VPA1138 cytochrome BD2, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D VP0425 outer membrane protein TolC K12340 tolC; outer membrane protein
D VPA1602 capsular polysaccharide transport protein K01991 wza; polysaccharide biosynthesis/export protein
D VPA1603 putative phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D VP2064 phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D VPA1604 putative tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D VP0771 polar flagellar FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPA0262 LfgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis [PATH:vpa04148]
D VPA1635 ornithine decarboxylase, inducible K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D VP0441 ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:vpa02024]
D VP2537 autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VPA1221 LuxP protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VPA1220 sensor protein LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VP1967 putative homoserine lactone synthase VanM K13062 ainS; acyl homoserine lactone synthase [EC:2.3.1.184]
D VP1968 sensor protein LuxN K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D VPA0711 aminotransferase, class II K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D VPA0710 sensor histidine kinase/response regulator LuxN K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VP2098 phosphorelay protein K10911 luxU; two-component system, phosphorelay protein LuxU
D VP2099 LuxO repressor protein K10912 luxO; two-component system, repressor protein LuxO
D VP2817 putative host factor-I K03666 hfq; host factor-I protein
D VP2516 OpaR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VP2762 conserved hypothetical protein K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VP1956 anthranilate synthase, alpha subunit K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D VP1957 anthranilate synthase, beta subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D VPA1185 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase, DAHP synthetase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VP0546 phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VP1616 3-deoxy-D-arabinoheptulosonate-7-phosphate (DAHP) synthetase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D VP1735 putative two-component sensor K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VP1734 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VPA1432 putative two-component response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VP1747 putative amino acid transporter K20265 gadC; glutamate:GABA antiporter
D VP1332 probable binding protein component of ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VPA0354 putative periplasmic solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VP1338 probable permease of ABC transporter K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VPA0351 putative permease of ABC transporter K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VP1337 putative permease of ABC transporter K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VPA0352 putative permease of ABC transporter K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VP1336 probable ATP-binding component of ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VPA0350 putative ATP-binding component of ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VPA1149 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VPA1151 putative ABC transporter, membrane spanning protein K01997 livH; branched-chain amino acid transport system permease protein
D VPA1150 putative high-affinity branched-chain amino acid transport permease protein K01998 livM; branched-chain amino acid transport system permease protein
D VPA1153 putative high-affinity branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VPA1148 putative high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VP0870 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPA1152 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP0351 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP1964 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP2793 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VP1962 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VP2729 putative zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D VPA0006 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VP1921 GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D VP0679 riboflavin-specific deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D VP2091 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VP1347 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VPA1739 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VP2090 oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D VP1346 oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D VP2089 oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D VP1345 oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D VP2088 oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D VP1344 oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D VPA1495 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VP2087 oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VP1343 oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VP2479 peptide ABC transporter, periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VP0048 peptide ABC transporter, periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VP2480 peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VP0049 peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VP2481 peptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VP0050 peptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VP0173 oligopeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPA0004 peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VP2482 peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VP0047 peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VP0174 oligopeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VPA0003 peptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VP2483 peptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VP0003 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VPA0227 alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D VP2928 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D VP2460 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D VP0277 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D VP0589 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D VP0467 SecA protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VP2956 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VP2831 protein-transport protein SecB K03071 secB; preprotein translocase subunit SecB
D VP2534 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae [PATH:vpa05111]
D VP2537 autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D VPA1220 sensor protein LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPA1221 LuxP protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D VPA0711 aminotransferase, class II K10915 cqsA; CAI-1 autoinducer synthase [EC:2.3.-.-]
D VPA0710 sensor histidine kinase/response regulator LuxN K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VP2098 phosphorelay protein K10911 luxU; two-component system, phosphorelay protein LuxU
D VP2099 LuxO repressor protein K10912 luxO; two-component system, repressor protein LuxO
D VP2817 putative host factor-I K03666 hfq; host factor-I protein
D VP2762 conserved hypothetical protein K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VP2184 AphB/LysR family K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D VPA1447 putative transcriptional regulator, LuxR family K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D VP0514 sigma-54 dependent transcriptional regulator K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D VP2833 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D VPA1403 putative capsular polysaccharide biosynthesis glycosyltransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31]
D VPA1404 hypothetical protein K20920 vpsM; polysaccharide biosynthesis protein VpsM
D VPA1405 putative polysaccharide export-related protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D VPA1406 putative exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VPA1413 hypothetical protein K20950 vpsQ; polysaccharide biosynthesis protein VpsQ
D VP0132 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VP0133 general secretion pathway protein D precursor K02453 gspD; general secretion pathway protein D
D VP0134 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VP0135 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VP0136 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VP0137 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VP0138 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VP0139 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VP0140 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VP0141 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VP0142 general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D VP0143 general secretion pathway protein N K02463 gspN; general secretion pathway protein N
D VP0820 ToxR K10921 toxR; cholera toxin transcriptional activator
D VP0819 ToxS K10922 toxS; transmembrane regulatory protein ToxS
D VP2467 outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VPA0695 accessory colonization factor AcfA K10936 acfA; accessory colonization factor AcfA
D VPA1376 conserved hypothetical protein K10939 acfD; accessory colonization factor AcfD
D VP2516 OpaR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VPA0755 putative metalloproteinase K08604 hap; vibriolysin [EC:3.4.24.25]
D VP2567 sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VP1945 transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VP2546 carbon storage regulator K03563 csrA; carbon storage regulator
D VP0793 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPA1667 PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VP2046 PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VP2987 adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D VP2793 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VP1962 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VP2885 factor-for-inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VP2076 putative GGDEF family protein K20955 cdgK; diguanylate cyclase [EC:2.7.7.65]
D VPA0068 GGDEF family protein K20956 cdgA; diguanylate cyclase [EC:2.7.7.65]
D VP0953 conserved hypothetical protein K20957 cdgH; diguanylate cyclase [EC:2.7.7.65]
D VP1441 GGDEF family protein K20959 cdgM; diguanylate cyclase [EC:2.7.7.65]
D VPA0869 GGDEF family protein K20962 cdgC; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VP2972 conserved hypothetical protein K07181 cdgJ; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VP2979 GGDEF family protein K20964 cdpA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VP2446 c-di-GMP phosphodiesterase A-related protein K20965 rocS; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VPA1088 c-di-GMP phosphodiesterase A-related protein K20966 mbaA; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VP2701 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D VPA0747 putative MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VP2698 putative V10 pilin K10924 mshA; MSHA pilin protein MshA
D VP2696 putative MSHA pilin protein MshC K10926 mshC; MSHA pilin protein MshC
D VP2695 putative MSHA pilin protein MshD K10927 mshD; MSHA pilin protein MshD
D VP2253 polar flagellar protein FlaK K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VP2670 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D VP2553 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D VP2252 FlaL K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VP2251 FlaM K10943 flrC; two-component system, response regulator FlrC
D VPA1555 flagellar-specific transcription initiation factor sigma, LafS K02405 fliA; RNA polymerase sigma factor FliA
D VP2232 flagellar-specific RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:vpa02030]
D VPA1189 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1904 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1892 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0511 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1486 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0491 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP0963 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP0421 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1651 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0554 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0842 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1462 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1449 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1185 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VP1088 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VP0183 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1492 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0562 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VPA0024 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0612 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VP1628 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1981 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP2629 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP2827 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP2159 putative methyl-accepting chemotaxis transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0596 putative methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VPA1182 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VPA1401 maltose ABC transporter, periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VPA1084 ribose ABC transporter, periplasmic D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D VP2229 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VP2225 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VP2226 conserved hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D VP2231 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VP1376 putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VP2230 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D VP2730 conserved hypothetical protein K03409 cheX; chemotaxis protein CheX
D VP2228 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VP0773 chemotaxis CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPA0431 putative chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPA0746 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VP2037 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VP0774 chemotaxis methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VPA1535 putative flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D VP2248 polar flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VP2242 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VPA1541 flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D VP2241 polar flagellar switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VP0689 sodium-driven polar flagellar protein MotA K02556 motA; chemotaxis protein MotA
D VPA1556 chemotaxis LafT protein K02556 motA; chemotaxis protein MotA
D VP0690 sodium-driven polar flagellar protein MotB K02557 motB; chemotaxis protein MotB
D VPA1557 chemotaxis LafU protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:vpa02040]
D VPA1537 putative flagellar hook-basal body complex protein K02408 fliE; flagellar hook-basal body complex protein FliE
D VP2250 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VPA1536 putative flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D VP2249 polar flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VPA1535 putative flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D VP2248 polar flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VP2247 polar flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VPA1534 putative flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D VP2246 polar flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPA1533 putative flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VP2245 polar flagellar assembly protein FliJ K02413 fliJ; flagellar protein FliJ
D VP2244 polar flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VPA1553 LafE K02414 fliK; flagellar hook-length control protein FliK
D VP2243 polar flagellar protein FliL K02415 fliL; flagellar protein FliL
D VP2950 putative flagellar protein FliL K02415 fliL; flagellar protein FliL
D VPA1554 LafF K02415 fliL; flagellar protein FliL
D VP2242 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VPA1541 flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D VP2241 polar flagellar switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VP2240 polar flagellar assembly protein FliO K02418 fliO; flagellar protein FliO/FliZ
D VPA1542 putative flagellar assembly protein K02419 fliP; flagellar biosynthesis protein FliP
D VP2239 polar flagellar assembly protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VPA1543 flagellar biosynthetic protein K02420 fliQ; flagellar biosynthesis protein FliQ
D VP2238 polar flagellar assembly protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VP2237 polar flagellar assembly protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VPA1544 putative flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VP2235 polar flagellar assembly protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VPA1546 flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D VP2236 polar flagellar assembly protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VPA1545 flagellar biosynthetic protein K02401 flhB; flagellar biosynthesis protein FlhB
D VP0772 polar flagellar FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VPA0263 LfgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VP0775 polar flagellar FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VPA0264 LfgB K02387 flgB; flagellar basal-body rod protein FlgB
D VP0776 polar flagellar FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VPA0265 LfgC K02388 flgC; flagellar basal-body rod protein FlgC
D VP0777 polar flagellar FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VPA0266 LfgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VP0778 polar flagellar FlgE K02390 flgE; flagellar hook protein FlgE
D VPA0267 LfgE K02390 flgE; flagellar hook protein FlgE
D VP0780 polar flagellar FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D VPA0268 putative flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D VP0781 polar flagellar FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VPA0269 putative flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D VP0782 flagellar L-ring protein precursor FlgH K02393 flgH; flagellar L-ring protein FlgH
D VPA0270 putative flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D VP0783 flagellar P-ring protein precursor FlgI K02394 flgI; flagellar P-ring protein FlgI
D VPA0271 putative flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D VP0784 peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D VPA0272 putative flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D VP0785 polar flagellar hook associated protein type 1 FlgK K02396 flgK; flagellar hook-associated protein 1
D VPA0273 putative flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D VP0786 hook-associated protein type 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VPA0274 putative flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D VP0768 conserved hypothetical protein K24344 flgO; flagellar H-ring protein FlgO
D VP0769 conserved hypothetical protein K09860 flgP; outer membrane protein FlgP
D VP0767 conserved hypothetical protein K24343 flgT; flagellar H-ring protein FlgT
D VP2811 sodium-type polar flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VP2111 sodium-type flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D VPA1539 putative sodium-type flagellar protein MotY precursor K21218 motY; sodium-type flagellar protein MotY
D VP0788 polar flagellin FlaC K02406 fliC; flagellin
D VP0790 polar flagellin FlaD K02406 fliC; flagellin
D VP2259 polar flagellin D K02406 fliC; flagellin
D VP0791 polar flagellin FlaE K02406 fliC; flagellin
D VPA1548 lateral flagellin LafA K02406 fliC; flagellin
D VP2258 polar flagellin FlaA K02406 fliC; flagellin
D VP2261 polar flagellin F K02406 fliC; flagellin
D VPA1550 flagellar distal capping protein homolog LafB K02407 fliD; flagellar hook-associated protein 2
D VP2256 flagellar hook-associated protein 2 FlaH K02407 fliD; flagellar hook-associated protein 2
D VPA1551 LafC K02422 fliS; flagellar secretion chaperone FliS
D VP2254 polar flagellar protein FlaJ K02422 fliS; flagellar secretion chaperone FliS
D VP0689 sodium-driven polar flagellar protein MotA K02556 motA; chemotaxis protein MotA
D VPA1556 chemotaxis LafT protein K02556 motA; chemotaxis protein MotA
D VP0690 sodium-driven polar flagellar protein MotB K02557 motB; chemotaxis protein MotB
D VPA1557 chemotaxis LafU protein K02557 motB; chemotaxis protein MotB
D VP0771 polar flagellar FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPA0262 LfgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPA0261 LfgN K02399 flgN; flagellar biosynthesis protein FlgN
D VP0770 polar flagellar FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D VP0404 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D VP2253 polar flagellar protein FlaK K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VP2670 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D VP2251 FlaM K10943 flrC; two-component system, response regulator FlrC
D VPA1555 flagellar-specific transcription initiation factor sigma, LafS K02405 fliA; RNA polymerase sigma factor FliA
D VP2232 flagellar-specific RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D VP2561 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D VP2717 cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection [PATH:vpa05110]
D VP1558 bacteriophage f237 ORF7 K10954 zot; zona occludens toxin
D VPA1598 putative chitinase K21712 gbpA; N-acetylglucosamine-binding protein A
D VPA0755 putative metalloproteinase K08604 hap; vibriolysin [EC:3.4.24.25]
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:vpa01501]
D VP2467 outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VP2356 putative AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D VP0545 beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D VP2091 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VP1347 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VPA1739 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VP2090 oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D VP1346 oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D VP2089 oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D VP1345 oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D VP2088 oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D VP1344 oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D VPA1495 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VP2087 oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VP1343 oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VP0040 transcriptional regulator, TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D VP1091 putative transmembrane protein affecting septum formation and cell membrane permeability K03585 acrA; membrane fusion protein, multidrug efflux system
D VPA1191 putative multidrug efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP0039 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP0940 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP1092 acridine efflux pump K18138 acrB; multidrug efflux pump
D VP0038 putative multidrug resistance protein K18138 acrB; multidrug efflux pump
D VPA0471 putative multidrug efflux membrane fusion protein K18138 acrB; multidrug efflux pump
D VPA1190 putative acriflavin resistance protein K18138 acrB; multidrug efflux pump
D VP0425 outer membrane protein TolC K12340 tolC; outer membrane protein
D VP2751 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VP0722 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VP0454 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VPA0477 beta-lactamase K19217 blaCARB-17; beta-lactamase class A CARB-17 [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:vpa01502]
D VPA0886 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VPA1001 putative alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VP2734 alanine racemase, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D VP0456 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D VP0457 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VP0460 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:vpa01503]
D VPA1280 conserved hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VP1171 peptide ABC transporter, periplasmic peptide-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D VP1170 peptide ABC transporter, permease protein K19227 sapB; cationic peptide transport system permease protein
D VP1169 peptide ABC transporter, permease protein K19228 sapC; cationic peptide transport system permease protein
D VP1168 peptide ABC transporter, ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D VP1167 peptide ABC transporter, ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D VP2859 sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VP2858 transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VP2820 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VPA1470 conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VP0433 protease DO K04771 degP; serine protease Do [EC:3.4.21.107]
D VP3054 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VPA1271 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VP2355 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VP1091 putative transmembrane protein affecting septum formation and cell membrane permeability K03585 acrA; membrane fusion protein, multidrug efflux system
D VPA1191 putative multidrug efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP0039 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP0940 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP1092 acridine efflux pump K18138 acrB; multidrug efflux pump
D VP0038 putative multidrug resistance protein K18138 acrB; multidrug efflux pump
D VPA0471 putative multidrug efflux membrane fusion protein K18138 acrB; multidrug efflux pump
D VPA1190 putative acriflavin resistance protein K18138 acrB; multidrug efflux pump
D VP0425 outer membrane protein TolC K12340 tolC; outer membrane protein
D VP2306 acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:vpa01000]
C 01001 Protein kinases [BR:vpa01001]
D VP0057 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D VP0402 putative Y4mE K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VPA1604 putative tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D VPA1406 putative exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VP0570 histidine protein kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VP0155 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VPA1277 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VP2859 sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VP0362 putative two component sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VP1735 putative two-component sensor K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VPA0675 sensor protein TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VP0487 sensor histidine kinase FexB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VPA1196 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VPA0965 putative sensor histidine protein kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D VP2567 sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VPA0736 putative sensory box sensor histidine kinase/response regulator VieS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VP1908 sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D VP1712 putative sensor kinase CitA K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D VP0539 conserved hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VP0119 nitrogen regulation protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VPA0826 putative phosphoglycerate transport regulatory protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VP0915 C4-dicarboxylate transport sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPA1731 putative C4-dicarboxylate transport sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VP1503 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VP2229 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VPA1220 sensor protein LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPA0710 sensor histidine kinase/response regulator LuxN K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VP1968 sensor protein LuxN K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D VP2010 putative tetrathionate reductase complex: sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VP1201 putative sensor-kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VP2252 FlaL K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VP2478 sensory box sensor histidine kinase/response regulator K19694 chiS; two-component system, sensor histidine kinase ChiS
C 01009 Protein phosphatases and associated proteins [BR:vpa01009]
D VP2855 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VP0821 heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VP2431 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:vpa01002]
D VP0535 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D VP2526 type IV prepilin-like proteins leader peptide processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VP2422 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D VPA0718 putative membrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D VPA0587 putative pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D VP0617 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D VP1485 lipoprotein NlpC K13695 nlpC; probable lipoprotein NlpC
D VP2185 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D VP0482 glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VP0484 glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D VP0359 glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D VP0826 asparagine synthetase B, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D VPA1346 putative targeted effector protein YopP K08598 yopJ; YopJ protease family
D VP2364 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme K03152 thiJ; protein deglycase [EC:3.5.1.124]
D VPA1470 conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VP1916 putative amidase K21470 ycbB; L,D-transpeptidase YcbB
D VP1604 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D VP0070 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D VP1308 putative oligopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D VPA0755 putative metalloproteinase K08604 hap; vibriolysin [EC:3.4.24.25]
D VPA0459 collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
D VP1340 collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
D VPA1650 putative zinc protease, insulinase family K07263 pqqL; zinc protease [EC:3.4.24.-]
D VP2540 protease, insulinase family K07263 pqqL; zinc protease [EC:3.4.24.-]
D VP2644 aminopeptidase A/I K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D VP0603 peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D VPA1611 putative carboxypeptidase G2 K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D VP2269 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D VP1365 putative M20/M25/M40 family peptidase K13049 PM20D1; carboxypeptidase PM20D1 [EC:3.4.17.-]
D VPA1193 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D VP1348 peptidase, M20A family K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D VP0671 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D VP1385 conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VPA0517 conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VP2319 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D VP3021 aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D VP1342 putative aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D VP1744 thermostable carboxypeptidase 1 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D VP2463 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VP1118 heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D VP2278 conserved hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D VP2311 putative membrane-associated Zn-dependent protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D VP0564 putative penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D VP1002 hypothetical protein K21429 impA; immunomodulating metalloprotease
D VP0433 protease DO K04771 degP; serine protease Do [EC:3.4.21.107]
D VP0432 protease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D VPA0227 alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D VPA1496 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D VPA0468 prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D VPA0167 putative protease K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D VPA1467 protease II K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D VP0719 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPA1594 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPA1296 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VP2468 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D VP0917 ATP-dependent Clp protease, proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D VP0919 ATP-dependent protease LA K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D VP1590 ATP-dependent protease LA-related protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D VP2945 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D VP2573 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D VP1606 tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D VP2152 protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D VP2032 sohB protein, peptidase U7 family K04774 sohB; serine protease SohB [EC:3.4.21.-]
D VP2951 GlpG protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D VP0250 protease HslVU, subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D VP2781 putative asparaginase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D VP3011 gamma-glutamyltranspeptidase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D VP0567 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D VPA1670 putative collagenase family protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D VP2448 putative protease K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D VP2447 putative protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D VP2676 PmbA protein K03592 pmbA; PmbA protein
D VPA0139 putative PmbA-related protein K03592 pmbA; PmbA protein
D VPA0138 putative TldD protein K03568 tldD; TldD protein
D VP2684 TldD protein K03568 tldD; TldD protein
D VP2814 HflC protein K04087 hflC; modulator of FtsH protease HflC
D VP2815 HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:vpa01003]
D VP1024 glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D VPA1617 putative transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D VP2497 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VP2751 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:vpa01005]
D VP2306 acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D VP2305 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D VP0465 UDP-3-O-3-hydroxymyristoyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D VP2308 UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D VP1148 conserved hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D VP0983 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D VP0179 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VP1745 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VP2509 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D VP0213 putative lipid A biosynthesis (kdo)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D VP0993 conserved hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D VP0211 KDO transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D VPA1280 conserved hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D VP0196 conserved hypothetical protein K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D VP0747 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D VP0984 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D VP2666 putative polysialic acid capsule expression protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D VP0193 putative lipopolysaccharide biosynthesis glycosyltransferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D VP0212 ADP-heptose-LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D VP0194 putative lipopolysaccharide biosynthesis protein K12982 opsX; heptosyltransferase I [EC:2.4.-.-]
D VP2288 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D VP0708 histidinol phosphatase-related protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D VP0424 ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D VP0214 ADP glyceromanno-heptose 6-epimerase GmhD K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:vpa01011]
D VP2658 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D VP2932 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D VP0461 UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D VP0458 UDP-N-acetylmuramoylalanine-D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D VP0455 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D VPA0886 D-alanine-D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D VPA1001 putative alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D VP2734 alanine racemase, biosynthetic K01775 alr; alanine racemase [EC:5.1.1.1]
D VP2936 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D VP0457 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D VP0460 UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D VP0413 putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VP0348 conserved hypothetical protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D VP0532 MviN protein K03980 murJ; putative peptidoglycan lipid II flippase
D VP2751 penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D VP2497 penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D VP0722 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D VP0454 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VP0719 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPA1594 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VPA1296 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D VP2468 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D VPA1617 putative transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D VPA1470 conserved hypothetical protein K19236 ycfS; L,D-transpeptidase YcfS
D VP1916 putative amidase K21470 ycbB; L,D-transpeptidase YcbB
D VP0564 putative penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D VP1385 conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VPA0517 conserved hypothetical protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D VP0552 soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D VP2369 membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D VP0876 putative lytic murein transglycosylase K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D VP2628 membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D VP2296 membrane-bound lytic murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D VP0665 transglycosylase, Slt family K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D VP2050 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D VP0720 putative rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D VP2820 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VP2521 AmpD protein K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D VPA1469 outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:vpa01004]
D VP2055 malonyl Coa-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D VPA0971 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VP2056 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D VP0884 putative 3-oxoacyl-ACP synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VP2194 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D VP2052 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VP0881 putative beta-ketoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D VP0882 putative beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPA0626 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VP2054 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPA1304 putative 3-oxoacyl-(acyl carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VPA1117 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D VP1591 3-hydroxydecanoyl-(acyl-carrier-protein) dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D VP2307 (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D VP1231 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPA0870 short-chain alcohol dehydrogenase family K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D VPA0872 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D VP0949 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D VP1971 putative acyl-CoA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D VPA0707 putative delta-9 fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D VP2878 acetyl-CoA synthase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D VP1644 PrpE protein K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17]
D VPA0575 acetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VPA1158 acetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16]
D VP0870 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPA1152 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP0351 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP1964 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP2947 glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D VP2057 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D VP0410 conserved hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D VP2657 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:vpa01006]
D VP0687 geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D VP0327 octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D VP2314 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D VP2818 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D VP0248 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D VP2948 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D VPA0544 putative cytochrome c oxidase assembly factor K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPA0631 putative protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:vpa01007]
D VP0762 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VP0832 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VP2502 glutamyl-tRNA synthetase-related protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D VP2470 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPA0368 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VP1096 putative tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VP2804 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VP1150 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VP0861 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VP2069 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VP0534 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VP2646 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VP0727 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VP0513 lysyl-tRNA synthetase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VP1047 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VP1893 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VP0609 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VP0022 glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VP0021 glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VP1108 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VP2333 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VP1280 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VP2548 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VP0613 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VP1290 phenylalanyl-tRNA synthetase, alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VP1291 phenylalanyl-tRNA synthetase, beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VPA0936 amino acid biosynthesis aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D VP0019 valine-pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D VP0927 putative aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D VP1900 aspartate aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D VP1139 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D VPA1510 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D VP1114 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D VP2797 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D VP1771 4-aminobutyrate aminotransferase K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48]
D VP1942 diaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VP1721 diaminobutyrate-pyruvate aminotransferase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D VP1112 adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D VP2475 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VP0205 putative glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D VP3060 branched-chain amino acid amiotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D VPA0235 2-aminoethylphosphonate:pyruvate aminotransferase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D VP2714 aminotransferase, class V K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D VP1247 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:vpa00194]
D VP3068 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D VP3069 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D VP3070 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D VP3071 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D VP3072 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D VP3073 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D VP3074 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D VP3075 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VP3076 ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:vpa03000]
D VPA1678 putative transcriptional regulator, AraC/XylS family K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D VP1699 transcriptional regulator ExsA K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D VP0854 putative transcriptional regulator, AraC/XylS family K19693 tfoS; AraC family transcriptional regulator, chitin signaling transcriptional activator
D VPA0400 putative transcription regulator K13652 K13652; AraC family transcriptional regulator
D VPA0045 ada regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VP0692 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D VP0034 transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D VP1976 transcriptional activator MetR K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D VP0527 transcriptional activator protein NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D VP2752 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VP0581 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VPA0456 putative transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D VP2595 chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VP0350 transcriptional regulator, LysR family K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D VP2184 AphB/LysR family K10918 aphB; LysR family transcriptional regulator, transcriptional activator AphB
D VP1101 cys regulon transcriptional activator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D VPA1694 putative D-serine dehydratase (deaminase) transcriptional activator K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator
D VPA0041 transcriptional regulator, LysR family K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D VP2387 transcriptional regulator, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D VP2393 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VP2396 LacI-family regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VPA1082 ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D VP0252 transcriptional repressor, LacI family K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D VPA0814 fructose repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D VP0709 trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D VP1030 transcriptional regulator, LacI family K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D VPA0232 putative transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D VP0058 gluconate utilization system Gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D VP2402 regulator of ebg operon K12113 ebgR; LacI family transcriptional regulator, ebg operon repressor
D VP1277 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D VP2071 fatty acid metabolism regulator protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D VP2520 pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D VPA1701 putative transcriptional regulatory protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D VPA1237 putative GntR-family regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D VPA1114 putative transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D VP0040 transcriptional regulator, TetR family K18136 acrR; TetR/AcrR family transcriptional regulator, multidrug resistance operon repressor
D VP0180 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D VP2516 OpaR K10913 hapR; TetR/AcrR family transcriptional regulator, hemagglutinin/protease regulatory protein
D VPA1415 putative transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D VP2941 transcriptional regulator, TetR family K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D VP0072 transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D VP1104 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPA1717 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPA1214 putative transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VP0947 transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D VPA1447 putative transcriptional regulator, LuxR family K20918 vpsT; LuxR family transcriptional regulator, positive regulator of biofilm formation
D VPA1623 malT regulatory protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D VPA1219 putative transcription regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D VPA1682 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D VPA0662 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VP2894 transcriptional regulator, MerR family K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D VPA0335 SoxR protein K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D VP0833 ferric uptake regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D VP2729 putative zinc uptake regulation protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D VPA0076 putative regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D VP2793 cyclic AMP receptor protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VP1962 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D VP1536 fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D VP0595 conserved hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D VP2808 conserved hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D VP2971 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D VP0529 transcriptional activator HlyU K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D VP2762 conserved hypothetical protein K10917 aphA; PadR family transcriptional regulator, regulatory protein AphA
D VPA1741 conserved hypothetical protein K15835 murR; RpiR family transcriptional regulator, murPQ operon repressor
D VP1236 conserved hypothetical protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D VP2931 BirA bifunctional protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D VP2885 factor-for-inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VP0553 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D VPA0864 putative ABC transporter periplasmic solute binding protein K11925 sgrR; SgrR family transcriptional regulator
D VP1778 putative transcriptional regulator K14056 puuR; HTH-type transcriptional regulator, repressor for puuD
D VP2144 putative transcription regulator protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D VP2253 polar flagellar protein FlaK K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VP1136 putative transcription regulator TxR K18219 txr; sigma-54 dependent transcriptional regulator, tetracycline resistant transcriptional regulator
D VP0514 sigma-54 dependent transcriptional regulator K20919 vpsR; sigma-54 dependent transcriptional regulator, positive regulator of biofilm formation
D VP1704 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D VP1391 putative transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator
D VP1190 putative sigma-54 dependent transcriptional regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D VPA0115 conserved hypothetical protein K02647 cdaR; carbohydrate diacid regulator
D VP2766 met repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D VPA1726 putative proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D VP2352 cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D VP3077 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPA1751 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VP0825 putative transcriptional activator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D VP0324 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D VP0828 N-acetylglucosamine repressor K02565 nagC; N-acetylglucosamine repressor
D VP2038 transcriptional regulator, ROK family K15545 mlc; transcriptional regulator of PTS gene
D VP0368 mannitol operon repressor K02562 mtlR; mannitol operon repressor
D VPA0132 putative transcriptional activator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D VP1869 transcriptional regulator TyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D VP2893 putative transcriptional activator CadC K03765 cadC; transcriptional activator of cad operon
D VP2274 putative glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D VP1172 psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D VP1175 phage shock protein C K03973 pspC; phage shock protein C
D VP0367 putative glycerol metabolism operon regulatory protein K05880 dhaR; transcriptional activator for dhaKLM operon
D VPA0988 regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D VP2612 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D VP2500 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D VP0678 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D VP0675 transcriptional regulator Crl K11926 crl; sigma factor-binding protein Crl
C 03021 Transcription machinery [BR:vpa03021]
D VP0282 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VP2922 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VP2921 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VP0160 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VP0404 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D VP2553 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D VP2578 RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VP2210 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VP2358 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VPA1690 RNA polymerase sigma-70 factor, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D VP2953 RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D VP2670 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D VPA1555 flagellar-specific transcription initiation factor sigma, LafS K02405 fliA; RNA polymerase sigma factor FliA
D VP2232 flagellar-specific RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D VP2682 RNA polymerase-associated protein HepA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D VP2457 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D VP0683 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D VP2927 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D VP0444 stringent starvation protein A K03599 sspA; stringent starvation protein A
D VP0445 stringent starvation protein B K03600 sspB; stringent starvation protein B
D VPA1049 putative two-component response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D VP2577 sigma-E factor negative regulatory protein RseA K03597 rseA; sigma-E factor negative regulatory protein RseA
D VP2576 sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D VP2575 sigma-E factor regulatory protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D VP2500 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D VP2466 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D VP0152 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D VP3000 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VPA0099 hypothetical protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:vpa03019]
D VP2062 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VP2687 cytoplasmic axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D VP2572 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VP2807 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VP1890 putative virulence-associated protein VacB/RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VP2823 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D VP3002 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D VPA0845 ATP-dependent RNA helicase, DEAD box family K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPA0390 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VP0903 RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D VPA0608 ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VP3007 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VP2340 putative ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VP2561 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VP2452 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D VP3000 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D VP2855 6-phosphofructokinase, isozyme I K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D VP0653 DnaK protein K04043 dnaK; molecular chaperone DnaK
D VP2851 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPA0287 chaperonin, 60 kDa subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VP2817 putative host factor-I K03666 hfq; host factor-I protein
D VP0573 polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D VP0578 conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D VP2504 polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D VP0520 MutT/nudix family protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D VP2546 carbon storage regulator K03563 csrA; carbon storage regulator
D VP2708 MSHA biogenesis protein MshH K18765 csrD; RNase E specificity factor CsrD
D VP0247 S-adenosylmethionine:2-demethylmenaquinone methyltransferase K02553 rraA; regulator of ribonuclease activity A
D VP0492 S-adenosylmethionine:2-demethylmenaquinone methyltransferase K02553 rraA; regulator of ribonuclease activity A
D VP2650 conserved hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D VP2673 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D VP1453 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D VP2498 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:vpa03011]
D VP2030 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D VP2318 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D VP0263 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D VP0281 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D VP0274 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D VP2740 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D VP2772 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D VP0271 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D VP0439 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D VP0256 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D VP0280 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D VP2773 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D VP0279 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D VP0270 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D VP2453 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D VP2533 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D VP0266 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D VP2738 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D VP0261 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D VP0531 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D VP0407 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D VP2925 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D VP0260 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D VP0257 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D VP0258 ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D VP0269 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D VP0272 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D VP2737 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D VP2924 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D VP2926 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D VP2923 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D VP0438 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D VP0267 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D VP0276 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D VP0264 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D VP0283 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D VP0273 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D VP2530 ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D VP1282 large subunit ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D VP0328 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D VP0262 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D VP0259 ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D VP0268 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D VP0329 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D VP0185 ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D VP0265 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D VP0275 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D VP0255 ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D VP2331 ribosomal protein, L31P family K02909 RP-L31; large subunit ribosomal protein L31
D VP2058 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D VP0186 ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D VP0005 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D VP1281 large subunit ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D VP0278 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D VP1210 ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D 5Sa 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sj 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Se 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sk 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sh 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sl 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sd 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sg 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sf 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Si 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sb 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sc 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 16Sd 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sa 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sk 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Si-2 16Si; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sg 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sl 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Si-1 16Si; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sf 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sj 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sb 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Se 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23Sb 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Se 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sa 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sf 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Si 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sh 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sg 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sk 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sd 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sj 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sl 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:vpa03009]
D VP2572 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VP2823 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D VP2571 GTP-binding protein Era K03595 era; GTPase
D VP0330 GTP1/Obg family protein K03979 obgE; GTPase [EC:3.6.5.-]
D VP2500 DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D VP2457 N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D VP0683 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D VP2927 transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D VP1215 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D VP0336 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D VP3044 Sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D VP2477 putative 16S rRNA m2G 1207 methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D VP2957 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D VP2610 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D VP1612 Sun/nucleolar protein family protein K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D VP3079 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VP0452 conserved hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D VP0450 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D VP0073 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D VP2160 rRNA (guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D VP2806 RNA methyltransferase, TrmH family K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D VP2464 cell division protein FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D VP1324 conserved hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D VP2353 putative methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D VP0723 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D VP1187 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D VP1629 putative SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D VP0069 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D VP1597 putative N6-adenine-specific DNA methylase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D VP0695 conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D VP0605 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D VP2566 putative TrmA family RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D VP2679 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPA0062 putative ribosomal large chain pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VP1186 pseudouridine synthase Rlu family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VP1951 pseudouridine synthase family 1 protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D VP2061 23S rRNA ribosomal pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D VP0559 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D VP1010 pseudouridine synthase family 1 protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D VP0750 pseudouridine synthase family 1 protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D VP2441 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D VP1868 ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D VPA0173 ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D VPA0760 putative ribosomal-protein-serine N-acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D VP2532 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D VP2883 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D VP2203 putative adenine-specific methylase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D VP2062 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D VP2687 cytoplasmic axial filament protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D VP2613 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D VP0288 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D VPA0608 ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D VP0505 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D VP2824 putative GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VPA1629 hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D VP0612 GTP-binding protein K03977 engA; GTPase
D VPA0712 putative GTPase YlqF K14540 rbgA; ribosome biogenesis GTPase A
D VP2816 GTP-binding protein HflX K03665 hflX; GTPase
D VP3035 Sua5/YciO/YrdC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VP0159 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D VP2455 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D VP2458 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D VPA0817 conserved hypothetical protein K14761 rlbA; ribosome-associated protein
D VP0724 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D VP0731 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D VP2465 putative RNA-binding protein containing KH domain K07574 yhbY; RNA-binding protein
D VPA0143 conserved hypothetical protein K14762 yibL; ribosome-associated protein
D VP2677 putative alpha helix protein K09889 yjgA; ribosome-associated protein
D VP1593 ribosome modulation factor K03812 rmf; ribosome modulation factor
D VP2671 putative sigma-54 modulation protein K05808 hpf; ribosome hibernation promoting factor
D VP0556 putative sigma-54 modulation protein K05809 raiA; ribosome-associated inhibitor A
D VP0737 GTP-binding protein K06942 ychF; ribosome-binding ATPase
D VP2059 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:vpa03016]
D VP0414 tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D VP0762 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VP2333 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D VP0534 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D VP0727 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VP2069 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D VP0832 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D VP0861 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VP0513 lysyl-tRNA synthetase, heat inducible K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D VP1047 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VP2548 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VP0613 hypothetical protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D VP1893 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D VP1280 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D VP1108 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D VP1150 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D VP2646 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D VP0609 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D VP1290 phenylalanyl-tRNA synthetase, alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D VP1291 phenylalanyl-tRNA synthetase, beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D VP2470 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPA0368 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VP1096 putative tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VP2804 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D VP0126 conserved hypothetical protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D VP1816 putative Hit protein involved in cell-cycle regulation K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VP0964 Hit family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VP2625 conserved hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D VP2332 conserved hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D VP2190 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D VP2454 tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D VP2557 putative hydrogenase subunit K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D VP0596 aminotransferase NifS, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VP3035 Sua5/YciO/YrdC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D VP2818 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D VP0002 thiophene and furan oxidation protein ThdF K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D VP3080 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VP0144 CysQ protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D VP0004 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D VP2114 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D VP0177 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D VPA0607 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D VP0871 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D VP0551 ABC transporter, ATP-binding protein K06020 ettA; energy-dependent translational throttle protein EttA
D VP0022 glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D VP0021 glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D VP2502 glutamyl-tRNA synthetase-related protein K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D VP0749 conserved hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D VP2597 putative DNA-binding protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D VPA0766 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D VP0663 YfhC protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D VP2727 NifR3/Smm1 family protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D VP2884 NifR3/Smm1 family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D VP2075 putative regulator protein K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D VP0733 conserved hypothetical protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D VP1045 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D VP1044 conserved hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D VP1034 SmtA protein K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D VP2939 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D VP2531 tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D VP0158 tRNA methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D VP0594 RNA methyltransferase, TrmH family K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D VP2861 rRNA methylase, SpoU family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D VP0506 conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D VPA0140 conserved hypothetical protein K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257]
D VP0954 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D VP2322 pseudouridine synthase Rlu family protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D VP2679 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VPA0062 putative ribosomal large chain pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VP1186 pseudouridine synthase Rlu family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D VP1130 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D VP1533 putative ATPase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D VP0025 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D VP2774 hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D VP2775 putative oxidation of intracellular sulfur K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D VP2776 conserved hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D VP1626 sulfite reductase, gamma subunit-related protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D VP0598 HesB family protein K13628 iscA; iron-sulfur cluster assembly protein
D VP2583 conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D VP1099 tRNA-(MS[2]IO[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D VP2195 putative peptidase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D VP0587 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D VP1638 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D VP1883 putative 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D VP1639 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D VP0701 conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D VP2822 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D VP0588 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D VP0691 thiamin biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D VP2301 cell cycle protein MesJ K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D VPA1750 hypothetical protein K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D VP0866 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D VP0408 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D VP2821 putative nucleotide-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D VP2368 HesA/MoeB/ThiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D VP2807 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VP1890 putative virulence-associated protein VacB/RNase R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D VP2452 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:vpa03012]
D VPA0888 Sui1 family protein K03113 EIF1; translation initiation factor 1
D VP2456 initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D VP2788 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D VP2317 elongation factor Ts K02357 tsf; elongation factor Ts
D VP2930 elongation factor TU K02358 tuf; elongation factor Tu
D VP2770 elongation factor TU K02358 tuf; elongation factor Tu
D VP2428 elongation factor EF-G K02355 fusA; elongation factor G
D VPA0328 putative translation elongation factor G K02355 fusA; elongation factor G
D VP2771 elongation factor G K02355 fusA; elongation factor G
D VP0743 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D VP2315 ribosome recycling factor K02838 frr; ribosome recycling factor
D VP0744 HemK protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D VP0738 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D VP1016 initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D VP1948 elongation factor P family protein K02356 efp; elongation factor P
D VP2845 elongation factor P K02356 efp; elongation factor P
D VP2838 lysyl-tRNA synthetase-related protein K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D VP2846 conserved hypothetical protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D VP2199 putative transporting ATPase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D VP0512 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D VP2440 peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3
D VPA0553 conserved hypothetical protein K09890 arfA; alternative ribosome-rescue factor
D VPA1188 conserved hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:vpa03110]
D VP1014 ATP-dependent Clp protease, ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D VP0561 ClpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D VP0918 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D VP0249 protease HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D VP0821 heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VP0653 DnaK protein K04043 dnaK; molecular chaperone DnaK
D VP0600 chaperone protein HscA K04044 hscA; molecular chaperone HscA
D VPA0650 heat shock protein 70 family protein K04046 yegD; hypothetical chaperone protein
D VP2851 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPA0287 chaperonin, 60 kDa subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VP0654 DnaJ protein K03686 dnaJ; molecular chaperone DnaJ
D VP0340 DnaJ-related protein K05801 djlA; DnaJ like chaperone protein
D VP0599 chaperone protein HscB K04082 hscB; molecular chaperone HscB
D VP0130 conserved hypothetical protein K04083 hslO; molecular chaperone Hsp33
D VP0651 GrpE K03687 GRPE; molecular chaperone GrpE
D VP0018 16 kDa heat shock protein A K04080 ibpA; molecular chaperone IbpA
D VP0131 conserved hypothetical protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D VP2852 chaperonin, 10 kDa subunit K04078 groES; chaperonin GroES
D VPA0286 chaperonin, 10 kDa subunit K04078 groES; chaperonin GroES
D VP0433 protease DO K04771 degP; serine protease Do [EC:3.4.21.107]
D VP2463 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D VP3075 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D VPA1505 CsuC K07346 fimC; fimbrial chaperone protein
D VP2831 protein-transport protein SecB K03071 secB; preprotein translocase subunit SecB
D VP2857 putative periplasmic protein CpxP K06006 cpxP; periplasmic protein CpxP/Spy
D VPA1627 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D VPA0652 conserved hypothetical protein K09796 pccA; periplasmic copper chaperone A
D VP1031 TorD protein K03533 torD; TorA specific chaperone
D VP1450 putative component of anaerobic dehydrogenases K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D VPA0227 alkaline serine protease K14645 K14645; serine protease [EC:3.4.21.-]
D VP0755 N,N'-diacetylchitobiase precursor K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VP2486 beta-N-hexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D VP2355 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VP1149 peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D VPA0023 peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D VP0921 peptidyl-prolyl cis-trans isomerse D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D VP2778 peptidyl-prolyl cis-trans isomerase, FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D VP0285 peptidyl-prolyl cis-trans isomerase, FKBP-type K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D VP0536 peptidyl-prolyl cis-trans isomerase, FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D VP2783 peptidyl-prolyl cis-trans isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D VPA0432 peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D VP0338 survival protein SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D VP3001 thioredoxin K03671 TXN; thioredoxin
D VPA0972 thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D VP0806 conserved hypothetical protein K05838 ybbN; putative thioredoxin
D VP1233 glutaredoxin 1 K03674 grxA; glutaredoxin 1
D VPA0386 glutaredoxin 2 K03675 grxB; glutaredoxin 2
D VP2117 putative glutaredoxin protein K07390 grxD; monothiol glutaredoxin
D VP3054 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VPA1271 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D VP2073 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D VP0510 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VP2865 thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D VP2217 thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D VP1924 thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:vpa04131]
D VP0604 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D VP0023 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D VP2157 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPA1230 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VP0356 pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPA0823 pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VP2039 pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VP0821 heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:vpa04121]
C 03051 Proteasome [BR:vpa03051]
D VP0821 heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:vpa03032]
D VPA0440 putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VP2293 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VP0642 putative ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D VP2911 DNA-binding protein HU-2 K05787 hupA; DNA-binding protein HU-alpha
D VP0920 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VP1294 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D VP2029 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D VP0011 chromosomal DNA replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D VP2735 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D VP0405 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D VP2709 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D VP2303 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VP0012 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VP2645 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VP0725 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VP2048 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPA0793 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2877 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2292 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP1903 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP1724 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPA0074 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2179 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VP2442 DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VP2304 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D VP0107 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VP0800 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VP2742 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VP0838 SeqA protein K03645 seqA; negative modulator of initiation of replication
D VP1932 DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VP0014 DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VP0431 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VP0430 topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VP1022 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VP2149 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:vpa03036]
D VP2572 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D VP1133 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D VP2911 DNA-binding protein HU-2 K05787 hupA; DNA-binding protein HU-alpha
D VP0920 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VP1294 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D VP2029 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D VP0011 chromosomal DNA replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D VP0447 putative phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein
D VPA0454 putative DNA-binding stress protein K04047 dps; starvation-inducible DNA-binding protein
D VPA0563 DPS family protein K04047 dps; starvation-inducible DNA-binding protein
D VP2885 factor-for-inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VP2817 putative host factor-I K03666 hfq; host factor-I protein
D VP2595 chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D VP1104 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPA1717 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VPA1214 putative transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D VP2128 nucleotide associated protein, present in spermidine nucleoids K06899 ndpA; nucleoid-associated protein
D VP1037 cell division protein MukB K03632 mukB; chromosome partition protein MukB
D VP1036 MukE protein K03804 mukE; chromosome partition protein MukE
D VP1035 MukF protein K03633 mukF; chromosome partition protein MukF
D VP0463 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D VP2560 putative septum formation initiator K05589 ftsB; cell division protein FtsB
D VP2955 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VP0454 penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D VP1105 putative cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D VP0453 cell division protein FtsL K03586 ftsL; cell division protein FtsL
D VP0462 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D VP0459 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D VP2954 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VP0464 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VP0799 cell division protein ZipA K03528 zipA; cell division protein ZipA
D VP2590 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D VP0246 conserved hypothetical protein K09892 zapB; cell division protein ZapB
D VP1599 conserved hypothetical protein K18657 zapC; cell division protein ZapC
D VP2528 conserved hypothetical protein K18778 zapD; cell division protein ZapD
D VP0436 conserved hypothetical protein K06916 zapE; cell division protein ZapE
D VP0286 conserved hypothetical protein K07269 ytfB; cell division protein YtfB
D VP2820 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D VP1091 putative transmembrane protein affecting septum formation and cell membrane permeability K03585 acrA; membrane fusion protein, multidrug efflux system
D VPA1191 putative multidrug efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP0039 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP0940 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP0874 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D VP0873 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D VP0872 cell division topological specificity factor K03608 minE; cell division topological specificity factor
D VP1264 hypothetical protein K13053 sulA; cell division inhibitor SulA
D VP0180 transcriptional regulator, TetR family K05501 slmA; TetR/AcrR family transcriptional regulator
D VP0838 SeqA protein K03645 seqA; negative modulator of initiation of replication
D VP2691 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VP2690 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D VP2689 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D VP0721 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D VPA0012 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D VP3078 ParA family protein K03496 parA; chromosome partitioning protein
D VP2227 Soj-like protein K03496 parA; chromosome partitioning protein
D VPA1752 ParA family protein K03496 parA; chromosome partitioning protein
D VP3077 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPA1751 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VP0431 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VP0430 topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VP3080 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D VP3079 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D VP2981 integrase/recombinase XerC K03733 xerC; integrase/recombinase XerC
D VP0509 integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD
D VP2068 Mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VP0109 conserved hypothetical protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:vpa03400]
D VPA0046 methylated-DNA-protein-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D VPA1471 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D VP0500 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D VP2626 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D VP2108 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D VP0468 mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D VPA0204 conserved hypothetical protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D VPA0045 ada regulatory protein K13529 ada-alkA; AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D VP1179 DNA-3-methyladenine glycosidase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D VP0189 formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D VP1003 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D VP0498 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D VP0511 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D VP0800 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D VP0107 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D VP2712 excinuclease ABC, subunit A K03701 uvrA; excinuclease ABC subunit A
D VP2100 excinuclease ABC, subunit B K03702 uvrB; excinuclease ABC subunit B
D VP1944 excinuclease ABC, subunit C K03703 uvrC; excinuclease ABC subunit C
D VP3013 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D VP2922 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D VP2921 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D VP0282 DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D VP0160 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D VP0975 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D VP2552 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D VP2819 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D VP0518 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH
D VP1301 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D VP0615 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D VP0688 exodeoxyribonuclease, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D VP2303 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D VP0012 DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D VP2645 DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D VP0725 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D VP2048 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D VPA0793 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2877 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2292 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP1903 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP1724 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VPA0074 putative DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D VP2179 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D VP2442 DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D VP2709 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D VP2742 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VP2374 exodeoxyribonuclease V, 135 kDa subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D VP2375 exodeoxyribonuclease V, 125 kDa subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D VPA1266 putative ATP-dependent exoDNAse (exonuclease V), alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VP2373 exodeoxyribonuclease V, 67 kDa subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D VP2550 RecA protein K03553 recA; recombination protein RecA
D VP1051 holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D VP1052 holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D VP1048 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D VP0253 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D VP2739 primosomal replication protein N K02686 priB; primosomal replication protein N
D VP1005 primosomal replication protein N'' K04067 priC; primosomal replication protein N''
D VPA1022 putative exonuclease SbcC K03546 sbcC; DNA repair protein SbcC/Rad50
D VPA1023 putative exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D VP2429 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D VP0013 RecF protein K03629 recF; DNA replication and repair protein RecF
D VP0157 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D VP2570 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D VP2177 recombination protein RecR K06187 recR; recombination protein RecR
D VP0648 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D VP0568 conserved hypothetical protein K03554 rdgC; recombination associated protein RdgC
D VP1214 helicase-related protein K19789 radD; DNA repair protein RadD
D VP1932 DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D VP0014 DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D VP1022 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D VP2911 DNA-binding protein HU-2 K05787 hupA; DNA-binding protein HU-alpha
D VP0920 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D VP2885 factor-for-inversion stimulation protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D VP1294 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D VP2029 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D VP3007 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VP2340 putative ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D VP1133 DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D VP2342 DNA-damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D VP2945 LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D VP1946 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D VP2034 hypothetical protein K14160 imuA; protein ImuA
D VP2035 hypothetical protein K14161 imuB; protein ImuB
D VP2036 putative DNA polymerase III alpha chain K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D VP2549 regulatory protein RecX K03565 recX; regulatory protein
D VP0041 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D VPA0672 helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D VP1007 ATP-dependent helicase, DinG family K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VP0865 ATP-dependent helicase, DinG family K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D VP1934 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D VP1935 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:vpa03029]
D VP0442 ubiquinol-cytochrome c reductase, cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D VP2456 initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D VP2317 elongation factor Ts K02357 tsf; elongation factor Ts
D VP2930 elongation factor TU K02358 tuf; elongation factor Tu
D VP2770 elongation factor TU K02358 tuf; elongation factor Tu
D VP2428 elongation factor EF-G K02355 fusA; elongation factor G
D VPA0328 putative translation elongation factor G K02355 fusA; elongation factor G
D VP2771 elongation factor G K02355 fusA; elongation factor G
D VP2571 GTP-binding protein Era K03595 era; GTPase
D VP2470 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VPA0368 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D VP0727 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D VP1047 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D VP0861 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D VP0696 minor nuclease C1B isoform precursor K01173 ENDOG; endonuclease G, mitochondrial
D VP2709 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D VP2310 surface antigen K07277 SAM50; outer membrane protein insertion porin family
D VP0653 DnaK protein K04043 dnaK; molecular chaperone DnaK
D VP0651 GrpE K03687 GRPE; molecular chaperone GrpE
D VP2851 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPA0287 chaperonin, 60 kDa subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VP2852 chaperonin, 10 kDa subunit K04078 groES; chaperonin GroES
D VPA0286 chaperonin, 10 kDa subunit K04078 groES; chaperonin GroES
D VP0654 DnaJ protein K03686 dnaJ; molecular chaperone DnaJ
D VP0596 aminotransferase NifS, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D VP0599 chaperone protein HscB K04082 hscB; molecular chaperone HscB
D VP2117 putative glutaredoxin protein K07390 grxD; monothiol glutaredoxin
D VP2068 Mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D VPA0544 putative cytochrome c oxidase assembly factor K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPA0631 putative protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D VPA0538 putative cytochrome c oxidase assembly transmembrane protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D VPA0543 putative cytochrome c oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D VP0003 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VPA1626 Sco1-related protein K07152 SCO1; protein SCO1
D VP0821 heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:vpa02000]
D VP0982 transport ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D VP1432 ATP-binding component of a transport system K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D VP1431 putative ATP-binding component of a transport system K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPA1715 ABC transporter, ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPA1434 putative hemolysin secretion ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D VPA0792 putative ATP-binding/permease fusion ABC transporter K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D VPA1736 toxin secretion ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VPA1444 putative transport protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D VP1249 transport ATP-binding protein CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D VP1250 transport ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D VP1609 ABC transporter, ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D VPA0224 putative ABC transporter, ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D VP1595 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D VPA0931 molybdenum ABC transporter, periplasmic molybdenum-binding protein K02020 modA; molybdate transport system substrate-binding protein
D VPA0930 molybdenum ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D VPA0929 molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D VPA0595 ATP-binding component of molybdate transport system K05776 modF; molybdate transport system ATP-binding protein
D VP1501 conserved hypothetical protein K05772 tupA; tungstate transport system substrate-binding protein
D VP1499 ABC transporter, permease protein K05773 tupB; tungstate transport system permease protein
D VP1498 ABC transporter, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D VPA1058 putative nitrate transport protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D VPA1057 putative nitrate transporter K15577 nrtB; nitrate/nitrite transport system permease protein
D VPA1056 nitrate transporter ATPase component NasD K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D VP2491 iron(III) ABC transporter, periplasmic iron-compound-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VPA0236 ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D VP2490 iron(III) ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VPA0239 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D VP2489 iron(III) ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VPA0238 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D VP0316 thiamin ABC transporter, periplasmic thiamin-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D VP0317 putative thiamine ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D VP0318 putative thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D VP1525 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VP1526 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VPA0367 spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D VP1527 spermidine/putrescine ABC transporter, permease protein K11070 potC; spermidine/putrescine transport system permease protein
D VP1528 spermidine/putrescine ABC transporter, permease protein K11071 potB; spermidine/putrescine transport system permease protein
D VP1529 spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D VP1332 probable binding protein component of ABC transporter K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VPA0354 putative periplasmic solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D VP1338 probable permease of ABC transporter K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VPA0351 putative permease of ABC transporter K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D VP1337 putative permease of ABC transporter K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VPA0352 putative permease of ABC transporter K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D VP1336 probable ATP-binding component of ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VPA0350 putative ATP-binding component of ABC transporter K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D VP1728 ABC superfamily (glycine/betaine/proline transport protein) K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VPA1111 putative glycine betaine-binding ABC transporter K02002 proX; glycine betaine/proline transport system substrate-binding protein
D VP1727 glycine betaine/L-proline transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D VPA1110 putative permease of ABC transporter K02001 proW; glycine betaine/proline transport system permease protein
D VPA1109 putative ATP-binding component of ABC transporter K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VP1726 ABC superfamily (glycine/betaine/proline transport protein) K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D VPA0133 putative ABC transporter substrate-binding protein K15598 thiY; putative hydroxymethylpyrimidine transport system substrate-binding protein
D VPA0134 ABC transporter permease protein K15599 thiX; putative hydroxymethylpyrimidine transport system permease protein
D VPA0135 putative ABC transporter, ATP-binding protein K15600 thiZ; putative hydroxymethylpyrimidine transport system ATP-binding protein
D VP1196 putative ABC transporter, periplasmic substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein
D VP1195 putative ABC transporter, permease protein K05778 ynjC; putative thiamine transport system permease protein
D VP1194 putative ABC transporter, ATP-binding protein K05779 ynjD; putative thiamine transport system ATP-binding protein
D VPA1401 maltose ABC transporter, periplasmic maltose-binding protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D VPA1400 maltose ABC transporter, permease protein K10109 malF; maltose/maltodextrin transport system permease protein
D VPA1399 maltose ABC transporter, permease protein K10110 malG; maltose/maltodextrin transport system permease protein
D VPA1402 maltose/maltodextrin ABC transporter, ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D VPA1663 putative binding protein component of ABC sugar transporter K17315 gtsA; glucose/mannose transport system substrate-binding protein
D VPA1673 L-arabinose-binding periplasmic protein precursor K10537 araF; L-arabinose transport system substrate-binding protein
D VPA1671 ABC-type arabinose transport system, permease component K10538 araH; L-arabinose transport system permease protein
D VPA1672 L-arabinose transport ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D VPA1084 ribose ABC transporter, periplasmic D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D VPA1085 ribose ABC transporter, permease protein K10440 rbsC; ribose transport system permease protein
D VPA1086 ribose ABC transporter, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D VP1159 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D VP2662 putative ABC superfamily transport protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VP1364 possible ABC transport system periplasmic substrate-binding protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D VP2663 putative ABC superfamily transport protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VP1361 putative ABC transport system permease protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D VP2664 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VP1363 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D VP2661 hypothetical protein K07323 mlaC; phospholipid transport system substrate-binding protein
D VP2660 putative anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D VPA0604 ABC transporter, periplasmic substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VP0571 putative phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VPA1461 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D VP0574 phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D VPA1460 phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D VP0575 phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D VPA1459 phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D VP0576 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VPA1458 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D VPA0637 arginine ABC transporter, periplasmic arginine-binding protein K09997 artI; arginine transport system substrate-binding protein
D VPA0639 arginine ABC transporter, permease protein K09998 artM; arginine transport system permease protein
D VPA0638 arginine ABC transporter, permease protein K09999 artQ; arginine transport system permease protein
D VPA0636 arginine ABC transporter, ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D VP1620 amino acid ABC transporter, periplasmic amino acid-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D VP1621 amino acid ABC transporter, permease protein K09970 aapQ; general L-amino acid transport system permease protein
D VP1622 amino acid ABC transporter, permease protein K09971 aapM; general L-amino acid transport system permease protein
D VP1623 amino acid ABC transporter, ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VP0999 amino acid ABC transporter, periplasmic amino acid-binding protein K10022 aotJ; arginine/ornithine transport system substrate-binding protein
D VP1001 amino acid ABC transporter, permease protein K10023 aotM; arginine/ornithine transport system permease protein
D VP1000 amino acid ABC transporter, permease protein K10024 aotQ; arginine/ornithine transport system permease protein
D VP0998 amino acid ABC transporter, ATP-binding protein K10025 aotP; arginine/ornithine transport system ATP-binding protein [EC:7.4.2.1]
D VPA1149 hypothetical protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D VPA1151 putative ABC transporter, membrane spanning protein K01997 livH; branched-chain amino acid transport system permease protein
D VPA1150 putative high-affinity branched-chain amino acid transport permease protein K01998 livM; branched-chain amino acid transport system permease protein
D VPA1153 putative high-affinity branched-chain amino acid transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D VPA1148 putative high-affinity branched-chain amino acid transport ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D VP0704 lipoprotein YaeC K02073 metQ; D-methionine transport system substrate-binding protein
D VP0379 putative ABC transporter substrate binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D VP0705 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D VP0706 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D VP2080 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D VP2079 putative ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D VP2078 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D VP0008 amino acid ABC transporter, periplasmic amino acid-binding portion K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D VP0007 amino acid ABC transproter, permease protein K16962 yxeN; putative S-methylcysteine transport system permease protein
D VP0006 amino acid ABC transporter, ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D VPA0008 putative amino acid ABC transporter, periplasmic amino acid-binding portion K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VPA0820 amino acid ABC transporter, periplasmic amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D VP3066 putative amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VPA0819 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VPA0821 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D VPA0822 amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D VP2091 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VP1347 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VPA1739 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D VP2090 oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D VP1346 oligopeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D VP2089 oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D VP1345 oligopeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D VP2088 oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D VP1344 oligopeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D VPA1495 ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VP2087 oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VP1343 oligopeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D VP1171 peptide ABC transporter, periplasmic peptide-binding protein K19226 sapA; cationic peptide transport system substrate-binding protein
D VP1170 peptide ABC transporter, permease protein K19227 sapB; cationic peptide transport system permease protein
D VP1169 peptide ABC transporter, permease protein K19228 sapC; cationic peptide transport system permease protein
D VP1168 peptide ABC transporter, ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D VP1167 peptide ABC transporter, ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D VP2479 peptide ABC transporter, periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VP0048 peptide ABC transporter, periplasmic peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D VP2480 peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VP0049 peptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D VP2481 peptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VP0050 peptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D VP0173 oligopeptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VPA0004 peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VP2482 peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VP0047 peptide ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D VP0174 oligopeptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VPA0003 peptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VP2483 peptide ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D VP0172 putative binding protein component of ABC transporter K13893 yejA; microcin C transport system substrate-binding protein
D VP2025 hypothetical protein K13893 yejA; microcin C transport system substrate-binding protein
D VP0170 putative transmembrane ABC transporter protein K13894 yejB; microcin C transport system permease protein
D VP0171 putative peptide ABC transporter, permease protein K13895 yejE; microcin C transport system permease protein
D VPA1655 putative FecB K23181 fecB; ferric citrate transport system substrate-binding protein
D VPA1653 putative ferrichrome ABC transporter (permease) K23182 fecD; ferric citrate transport system permease protein
D VPA1654 putative ferrichrome ABC transporter (permease) K23183 fecC; ferric citrate transport system permease protein
D VPA1652 ATP-binding component of citrate-dependent iron(III) transport protein K23184 fecE; ferric citrate transport system ATP-binding protein [EC:7.2.2.18]
D VPA1437 iron(III) ABC transporter, periplasmic iron-compound-binding protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D VPA1438 iron(III) ABC transporter, permease protein K23228 fhuB; ferric hydroxamate transport system permease protein
D VPA1436 iron(III) ABC transporter, ATP-binding protein K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D VPA0423 hemin ABC transporter, periplasmic hemin-binding protein HutB K25132 hmuT; heme transport system substrate-binding protein
D VPA0422 putative hemin ABC transporter, permease protein K25133 hmuU; heme transport system permease protein
D VPA0421 hemin ABC transporter, ATP-binding protein HutD K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D VPA0657 iron(III) ABC transporter, periplasmic iron-compound-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D VPA0659 iron(III) ABC transporter, permease protein K25283 yclO; iron-siderophore transport system permease protein
D VPA0658 iron(III) ABC transporter, permease protein K25284 yclN; iron-siderophore transport system permease protein
D VPA0660 iron(III) ABC transporter, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D VP0477 conserved hypothetical protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D VP1311 putative vitamin B12 ABC transporter, permease protein BtuC K06073 btuC; vitamin B12 transport system permease protein
D VP1312 putative vitamin B12 ABC transporter, ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D VP0853 zinc ABC transporter, periplasmic zinc-binding protein K09815 znuA; zinc transport system substrate-binding protein
D VPA0162 putative adhesion protein K09815 znuA; zinc transport system substrate-binding protein
D VP0851 zinc ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D VPA0164 putative permease of ABC transporter K09816 znuB; zinc transport system permease protein
D VP0852 zinc ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VPA0163 putative ATP-binding component of ABC transporter K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D VPA1481 hypothetical protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D VPA1483 putative ABC transporter membrane-spanning permease K16785 ecfT; energy-coupling factor transport system permease protein
D VPA1482 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D VPA1307 putative adhesion protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D VPA1306 hypothetical protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D VP2643 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D VP2642 putative permease K11720 lptG; lipopolysaccharide export system permease protein
D VP2669 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D VP0977 conserved hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D VP0979 conserved hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein
D VP0978 ABC transporter, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D VP2220 heme exporter protein D K02196 ccmD; heme exporter protein D
D VP2221 heme exporter protein C K02195 ccmC; heme exporter protein C
D VP2222 heme exporter protein B K02194 ccmB; heme exporter protein B
D VP2223 heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D VP2954 cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D VP2955 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D VPA0032 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VP1715 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VP2510 putative permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D VP1717 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VPA0488 putative transmembrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D VPA0033 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VP2511 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VPA0489 putative ATP-binding component of a transport system K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D VPA0873 putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D VP1996 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VP1997 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VP0300 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VPA0017 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VP1226 conserved hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D VP1995 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VP0301 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VP1225 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPA0015 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPA0871 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VPA0560 putative ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D VP1256 transporter, NadC family K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VP1374 putative transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VP2826 putative transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D VP0526 NptA protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D VP1479 multidrug resistance protein NorM (Na+/drug antiporter) K26939 norM; MATE family, multidrug efflux pump
D VPA1227 conserved hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D VPA0061 hypothetical membrane protein K26937 dinF; MATE family, multidrug efflux pump
D VP2943 DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D VP1224 adhesin K26937 dinF; MATE family, multidrug efflux pump
D VP2853 conserved hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D VP2449 Na+-coupled multidrug efflux pump K26937 dinF; MATE family, multidrug efflux pump
D VPA0975 hypothetical protein K26937 dinF; MATE family, multidrug efflux pump
D VPA0939 putative adhesin K26937 dinF; MATE family, multidrug efflux pump
D VPA0701 putative oxalate/formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D VP2875 putative transport permease protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D VPA0963 MFS family, hexose phosphate transport protein K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT
D VP2382 glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D VPA0966 regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VPA0824 putative regulatory protein UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D VP2968 putative transporter K25223 arsJ; MFS transporter, APGE family, 1-arseno-3-phosphoglycerate exporter
D VP2356 putative AmpG protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D VP3019 putative multidrug resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D VP1216 multidrug resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D VPA0168 multidrug resistance protein D K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D VPA1574 putative membrane transport protein K08163 mdtL; MFS transporter, DHA1 family, multidrug resistance protein
D VPA0098 putative efflux pump protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D VP1315 putative multidrug resistance protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D VPA0973 putative MFS family transport protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D VP0794 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D VP0521 phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D VP0795 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D VP0366 putative phosphoenolpyruvate-protein phosphotransferase (phosphotransferase system, enzyme I) K02784 ptsH; phosphocarrier protein HPr
D VP2674 phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D VPA0813 PTS system, fructose-specific IIA/FPR component K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D VP0793 PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D VPA1667 PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VP2046 PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D VP0831 PTS system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D VP0710 PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D VPA1744 putative PTS system, sucrose-specific IIBC component K11192 murP; N-acetylmuramic acid PTS system EIICB component [EC:2.7.1.192]
D VPA0298 PTS system, fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D VPA0811 PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D VPA1421 PTS system, fructose-specific IIB component K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D VPA1420 PTS system, fructose-specific IIABC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D VPA0297 PTS system, fructose-specific IIBC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D VPA0500 putative PTS system, mannitol-specific enzyme II component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D VPA0501 mannitol-specific PTS system enzyme II component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VP0370 PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D VP2635 PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D VP2637 PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D VP2636 PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D VPA0231 phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D VPA0230 putative sugar phosphotransferase component II B K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D VPA0229 putative membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D VP2672 nitrogen regulatory IIA protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VPA1422 putative PTS system, nitrogen regulatory IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D VP2176 aquaporin Z K06188 aqpZ; aquaporin Z
D VP2385 glycerol uptake facilitator protein GlpF K02440 glpF; glycerol uptake facilitator
D VP2123 putative potassium channel K10716 kch; voltage-gated potassium channel
D VP1064 putative eukaryotic-type potassium channels K10716 kch; voltage-gated potassium channel
D VP0422 putative potassium channel protein K10716 kch; voltage-gated potassium channel
D VP2492 putative ammonium transporter K03320 amt; ammonium transporter, Amt family
D VP1523 putative ammonium transporter Amt K03320 amt; ammonium transporter, Amt family
D VPA0642 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VPA1417 putative glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D VP0444 stringent starvation protein A K03599 sspA; stringent starvation protein A
D VPA0689 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D VPA1454 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D VPA0688 conserved hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D VPA1455 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D VP1624 putative TEGT family carrier/transport protein K19416 yccA; modulator of FtsH protease
D VP1157 putative formate transporter 1 K06212 focA; formate transporter
D VPA0851 putative formate transporter 1 K06212 focA; formate transporter
D VPA0985 putative formate dehydrogenase K21993 fdhC; formate transporter
D VP2598 conserved hypothetical protein K03442 mscS; small conductance mechanosensitive channel
D VP2168 hypothetical protein K03442 mscS; small conductance mechanosensitive channel
D VPA1501 putative membrane protein K16052 ynaI; MscS family membrane protein
D VP2675 magnesium transporter K06213 mgtE; magnesium transporter
D VPA1240 putative magnesium transporter MgtE K06213 mgtE; magnesium transporter
D VP0689 sodium-driven polar flagellar protein MotA K02556 motA; chemotaxis protein MotA
D VPA1556 chemotaxis LafT protein K02556 motA; chemotaxis protein MotA
D VP0690 sodium-driven polar flagellar protein MotB K02557 motB; chemotaxis protein MotB
D VPA1557 chemotaxis LafU protein K02557 motB; chemotaxis protein MotB
D VP2811 sodium-type polar flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VP2111 sodium-type flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D VPA1539 putative sodium-type flagellar protein MotY precursor K21218 motY; sodium-type flagellar protein MotY
D VPA0152 biopolymer transport protein ExbB-related protein K03561 exbB; biopolymer transport protein ExbB
D VPA0425 ExbB-like protein K03561 exbB; biopolymer transport protein ExbB
D VP0165 TonB system transport protein ExbB2 K03561 exbB; biopolymer transport protein ExbB
D VP0166 putative TolR K03561 exbB; biopolymer transport protein ExbB
D VPA0153 TonB system transport protein ExbB2 K03561 exbB; biopolymer transport protein ExbB
D VPA0154 TonB system transport protein ExbD2 K03559 exbD; biopolymer transport protein ExbD
D VP0164 TonB system transport protein ExbD2 K03559 exbD; biopolymer transport protein ExbD
D VP1057 TolQ protein K03562 tolQ; biopolymer transport protein TolQ
D VP1058 TolR membrane protein K03560 tolR; biopolymer transport protein TolR
D VP2389 putative membrane transport protein K16074 zntB; zinc transporter
D VP3028 CrcB protein K06199 crcB; fluoride exporter
D VP0902 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VP2912 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VP2536 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VP2467 outer membrane protein OmpU K08720 ompU; outer membrane protein OmpU
D VPA1644 maltose-inducible porin K02024 lamB; maltoporin
D VP0764 outer membrane protein OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VPA1186 outer membrane protein OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VPA0248 putative outer membrane protein OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family
D VPA0860 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VP2212 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VP2213 long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VPA0222 putative long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D VP2362 outer membrane protein OmpK precursor K05517 tsx; nucleoside-specific channel-forming protein
D VPA1504 CsuD K07347 fimD; outer membrane usher protein
D VPA1656 ferric vibrioferrin receptor K16091 fecA; Fe(3+) dicitrate transport protein
D VP2938 putative vitamin B12 receptor K16092 btuB; vitamin B12 transporter
D VP2602 iron-regulated outer membrane virulence protein homolog K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D VPA0664 putaive Fe-regulated protein B precursor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VPA0882 heme transport protein HutA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D VPA1435 putative iron(III) compound receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPA1466 putative TonB system receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPA0150 putative ferrichrome-iron receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VP0168 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPA1657 ferric siderophore receptor homolog K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VPA0979 ferric aerobactin receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D VP0425 outer membrane protein TolC K12340 tolC; outer membrane protein
D VPA0954 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VP1634 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VP1631 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VPA0362 putative outer membrane protein K18300 oprN; outer membrane protein, multidrug efflux system
D VPA1405 putative polysaccharide export-related protein K20988 vpsN; polysaccharide biosynthesis/export protein VpsN
D VPA1602 capsular polysaccharide transport protein K01991 wza; polysaccharide biosynthesis/export protein
D VP2310 surface antigen K07277 SAM50; outer membrane protein insertion porin family
D VP0611 conserved hypothetical protein K17713 bamB; outer membrane protein assembly factor BamB
D VP2272 lipoprotein-34 NlpB K07287 bamC; outer membrane protein assembly factor BamC
D VP0558 conserved hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D VP0647 small protein A K06186 bamE; outer membrane protein assembly factor BamE
D VP0307 conserved hypothetical protein K07278 tamA; translocation and assembly module TamA
D VP0308 conserved hypothetical protein K09800 tamB; translocation and assembly module TamB
D VPA0085 putative exported protein K22110 kdgM; oligogalacturonate-specific porin family protein
D VP2668 putative ABC superfamily transport protein K09774 lptA; lipopolysaccharide export system protein LptA
D VP2667 hypothetical protein K11719 lptC; lipopolysaccharide export system protein LptC
D VP0339 organic solvent tolerance protein K04744 lptD; LPS-assembly protein
D VP0726 rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein
D VPA1404 hypothetical protein K20920 vpsM; polysaccharide biosynthesis protein VpsM
D VP1657 putative translocator protein PopB K23475 yopB; transloator
D VP1656 putative translocator protein PopD K23476 yopD; transloator
D VP0730 putative hemolysin K06189 corC; hemolysin (HlyC) family protein
D VP1300 conserved hypothetical protein K06518 cidA; holin-like protein
D VPA1634 putrescine transport protein K03756 potE; putrescine:ornithine antiporter
D VP2891 putative cadaverine/lysine antiporter CadB K03757 cadB; cadaverine:lysine antiporter
D VP1747 putative amino acid transporter K20265 gadC; glutamate:GABA antiporter
D VPA1236 conserved hypothetical protein K16263 yjeH; amino acid efflux transporter
D VP2856 putative CDF family transport protein K13283 fieF; ferrous-iron efflux pump FieF
D VPA0480 putative cation efflux system transmembrane protein K07787 cusA; copper/silver efflux system protein
D VP1092 acridine efflux pump K18138 acrB; multidrug efflux pump
D VP0038 putative multidrug resistance protein K18138 acrB; multidrug efflux pump
D VPA0471 putative multidrug efflux membrane fusion protein K18138 acrB; multidrug efflux pump
D VPA1190 putative acriflavin resistance protein K18138 acrB; multidrug efflux pump
D VP2472 putative multidrug resistance protein K18989 vexF; multidrug efflux pump
D VPA0756 molecular chaperone SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D VP0061 putative multidrug transmembrane resistance signal peptide protein K11742 mdtI; spermidine export protein MdtI
D VP0060 putative multidrug transmembrane resistance signal peptide protein K11743 mdtJ; spermidine export protein MdtJ
D VP3008 RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD
D VP2115 conserved hypothetical protein K07084 yuiF; putative amino acid transporter
D VP0064 putative gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D VPA0116 permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D VP2864 C4-dicarboxylate transporter, anaerobic K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D VPA0981 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D VPA1498 putative L-lactate permease K03303 lutP; lactate permease
D VP2665 putative sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter
D VPA1724 sodium/proline symporter K11928 putP; sodium/proline symporter
D VP2869 sodium/solute symporter K14393 actP; cation/acetate symporter
D VPA1630 sodium/dicarboxylate symporter K07862 sstT; serine/threonine transporter
D VPA0035 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D VPA0031 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D VP1435 putative sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D VP1228 Na+/H+-antiporter protein K03313 nhaA; Na+:H+ antiporter, NhaA family
D VP2072 Na+/H+-exchanging protein K03314 nhaB; Na+:H+ antiporter, NhaB family
D VP2125 Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D VP1134 conserved hypothetical protein K18218 tet35; tetracycline resistance efflux pump
D VP2867 putative sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D VP2718 putative Na+/H+ antiporter K03316 nhaP; Na+:H+ antiporter
D VP2785 glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D VPA0464 putative TrkA family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D VP2786 putative NAD(P)H oxidoreductase K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D VPA0465 putative NAD(P)H oxidoreductase K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D VP0032 potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VP3046 potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D VPA1430 putative Na+-transporting ATP synthase K03498 trkH; trk/ktr system potassium uptake protein
D VP0905 KtrB K03498 trkH; trk/ktr system potassium uptake protein
D VP3045 potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D VP0904 KtrA K03499 trkA; trk/ktr system potassium uptake protein
D VPA1431 putative potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D VPA1242 cytosine permease/transport K10974 codB; cytosine permease
D VP2283 uracil permease K02824 uraA; uracil permease
D VP0156 xanthine/uracil permease family protein K16345 xanP; xanthine permease XanP
D VP0672 conserved hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D VP1426 tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D VPA0509 putative tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D VPA1067 serine transporter K03837 sdaC; serine transporter
D VP1879 serine transporter K03837 sdaC; serine transporter
D VP2175 putative HAAAP family transport protein K26604 cyuP; cysteine uptake transport protein
D VPA1166 conserved hypothetical protein K03281 clcA; chloride channel protein, CIC family
D VP2407 chromate resistance protein-related protein K07240 chrA; chromate transporter
D VP2513 sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D VP2063 sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D VP0910 C4-dicarboxylate-binding periplasmic protein K11688 dctP; C4-dicarboxylate-binding protein DctP
D VP0911 putative C4-dicarboxylate transport protein DctQ K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D VP0912 C4-dicarboxylate transport protein K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D VPA0496 putative heavy metal membrane efflux protein K03325 ACR3; arsenite transporter
D VPA0706 C4-dicarboxylate transporter, anaerobic K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D VP0532 MviN protein K03980 murJ; putative peptidoglycan lipid II flippase
D VP1094 conserved hypothetical protein K13936 mdcF; malonate transporter and related proteins
D VP1293 conserved hypothetical protein K24180 mleP; malate permease and related proteins
D VP2596 LysE/YggA family protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D VP2973 conserved hypothetical protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VP1379 putative homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VPA0378 conserved hypothetical protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VPA1206 conserved hypothetical protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D VP1862 putative threonine efflux protein K05835 rhtC; threonine efflux protein
D VP3010 conserved hypothetical protein K05835 rhtC; threonine efflux protein
D VPA1232 conserved hypothetical protein K05835 rhtC; threonine efflux protein
D VPA0289 hypothetical protein K05835 rhtC; threonine efflux protein
D VPA1003 putative branched-chain amino acid transport protein AzlC K26605 azlC; branched chain amino acid efflux pump
D VPA0530 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D VPA0529 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D VPA1004 putative transmembrane protein K26606 azlD; branched chain amino acid efflux pump
D VP1653 putative tricarboxylic transport TctA K07793 tctA; putative tricarboxylic transport membrane protein
D VP1652 putative tricarboxylic transport TctB K07794 tctB; putative tricarboxylic transport membrane protein
D VP1651 putative tricarboxylic transport TctC K07795 tctC; putative tricarboxylic transport membrane protein
D VP2276 permease PerM K03548 perM; putative permease
D VP3004 conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter
D VPA1600 hypothetical protein K05595 marC; multiple antibiotic resistance protein
D VP2122 putative channel protein K05595 marC; multiple antibiotic resistance protein
D VP0459 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D VP0023 conserved hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D VPA0426 TonB-like protein K03832 tonB; periplasmic protein TonB
D VPA0155 TonB2 protein K03832 tonB; periplasmic protein TonB
D VP0163 putative TonB2 protein K03832 tonB; periplasmic protein TonB
D VP1061 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D VP1059 TolA protein K03646 tolA; colicin import membrane protein
D VP1060 TolB protein K03641 tolB; TolB protein
D VP2543 oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D VP2544 oxaloacetate decarboxylase, alpha subunit K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D VP2545 putative oxaloacetate decarboxylase gamma chain 1 K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D VP2006 putative suppressor for copper-sensitivity B precursor K08344 scsB; suppressor for copper-sensitivity B
D VP1447 putaive anaerobic dimethyl sulfoxide reductase, subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D VP1448 anaerobic dimethyl sulfoxide reductase, subunit B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D VP1449 putative anaerobic dimethyl sulfoxide reductase, chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D VP1162 trimethylamine-N-oxide reductase K07811 torA; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VP1161 cytochrome c-type protein TorC K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D VP1031 TorD protein K03533 torD; TorA specific chaperone
D VPA0127 cytochrome c-type protein YecK K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY
D VPA0128 biotin sulfoxide reductase K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D VP2014 putative tetrathionate reductase, subunit A K08357 ttrA; tetrathionate reductase subunit A
D VP2011 tetrathionate reductase, subunit B K08358 ttrB; tetrathionate reductase subunit B
D VP2013 putative tetrathionate reductase complex, subunit C K08359 ttrC; tetrathionate reductase subunit C
D VPA0097 putative secretion protein K03543 emrA; membrane fusion protein, multidrug efflux system
D VPA1443 putative protein secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D VPA0481 putative cation efflux system transmembrane protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D VPA1733 secretion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D VP1091 putative transmembrane protein affecting septum formation and cell membrane permeability K03585 acrA; membrane fusion protein, multidrug efflux system
D VPA1191 putative multidrug efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP0039 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP0940 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP2473 conserved hypothetical protein K18990 vexE; membrane fusion protein, multidrug efflux system
D VPA0223 putative HlyD family secretion protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D VPA1406 putative exopolysaccharide biosynthesis protein K16554 exoP; polysaccharide biosynthesis transport protein [EC:2.7.10.3]
D VP1462 putative polysaccharide export protein K25590 epsF; protein tyrosine kinase modulator
D VPA1604 putative tyrosine kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D VPA1080 putative membrane transport protein K03811 pnuC; nicotinamide mononucleotide transporter
D VP0857 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D VP0858 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D VP0859 hypothetical protein K10123 feoC; putative ferrous iron transport protein C
D VP0078 conserved hypothetical protein K06144 uspB; universal stress protein B
D VP2218 cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D VP1925 NrfE K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D VP2849 hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D VPA0318 putative outer membrane protein OmpV K07274 mipA; MipA family protein
D VP1446 hypothetical protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:vpa02044]
D VP0425 outer membrane protein TolC K12340 tolC; outer membrane protein
D VPA1444 putative transport protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D VPA1443 putative protein secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D VPA1736 toxin secretion ATP-binding protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D VPA1733 secretion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D VPA0954 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VP1634 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VP1631 agglutination protein K12543 lapE; outer membrane protein, adhesin transport system
D VP0415 putative general secretion pathway protein A K02450 gspA; general secretion pathway protein A
D VP0416 putative general secretion pathway protein B K02451 gspB; general secretion pathway protein B
D VP0132 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D VP0133 general secretion pathway protein D precursor K02453 gspD; general secretion pathway protein D
D VP0134 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D VP0135 general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D VP0136 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D VP0137 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D VP0138 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D VP0139 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D VP0140 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D VP0141 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D VP0142 general secretion pathway protein M K02462 gspM; general secretion pathway protein M
D VP0143 general secretion pathway protein N K02463 gspN; general secretion pathway protein N
D VP2526 type IV prepilin-like proteins leader peptide processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VP2523 type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D VP2524 type IV pilin assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D VP2525 type IV pilin biogenesis protein PilC K02653 pilC; type IV pilus assembly protein PilC
D VP0656 putative fimbrial assembly protein PilE K02655 pilE; type IV pilus assembly protein PilE
D VP1752 putative fimbrial biogenesis and twitching motility protein K02656 pilF; type IV pilus assembly protein PilF
D VP2750 putative fimbrial assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D VP2749 putative fimbrial assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D VP2748 putative fimbrial assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D VP2747 putative fimbrial assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D VP2746 fimbrial assembly protein K02666 pilQ; type IV pilus assembly protein PilQ
D VP2615 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D VP2614 twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D VP0660 putative type IV pilin K02671 pilV; type IV pilus assembly protein PilV
D VP0658 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D VP0657 putative type IV pilin K08084 fimT; type IV fimbrial biogenesis protein FimT
D VP2191 hypothetical protein K08086 fimV; pilus assembly protein FimV
D VP2422 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D VPA0718 putative membrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D VP2420 putative pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D VPA0720 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D VP2419 putative pilus assembly transmembrane protein K02280 cpaC; pilus assembly protein CpaC
D VPA0721 rough colony protein RcpA K02280 cpaC; pilus assembly protein CpaC
D VP2413 putative pilus assembly protein K02282 cpaE; pilus assembly protein CpaE
D VPA0723 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D VPA0724 TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VP2412 putative pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VPA0725 putative TadB K12510 tadB; tight adherence protein B
D VP2411 putative tight adherence TadB-related transmembrane protein K12510 tadB; tight adherence protein B
D VPA0726 putative TadC K12511 tadC; tight adherence protein C
D VP2410 putative tight adherence TadC-related transmembrane protein K12511 tadC; tight adherence protein C
D VPA0727 putative nonspecific tight adherence protein TadD K12512 tadD; tight adherence protein D
D VPA0728 hypothetical protein K12513 tadE; tight adherence protein E
D VPA0729 hypothetical protein K12514 tadF; tight adherence protein F
D VPA0730 hypothetical protein K12515 tadG; tight adherence protein G
D VP2423 putative fimbrial protein K02651 flp; pilus assembly protein Flp/PilA
D VPA0719 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D VPA0747 putative MSHA pilin protein MshA K10924 mshA; MSHA pilin protein MshA
D VP2698 putative V10 pilin K10924 mshA; MSHA pilin protein MshA
D VP2696 putative MSHA pilin protein MshC K10926 mshC; MSHA pilin protein MshC
D VP2695 putative MSHA pilin protein MshD K10927 mshD; MSHA pilin protein MshD
D VP2701 MSHA biogenesis protein MshE K12276 mshE; MSHA biogenesis protein MshE
D VP2699 putative MSHA biogenesis protein MshF K12277 mshF; MSHA biogenesis protein MshF
D VP2700 MSHA biogenesis protein MshG K12278 mshG; MSHA biogenesis protein MshG
D VP2707 MSHA biogenesis protein MshI K12279 mshI; MSHA biogenesis protein MshI
D VP2706 MSHA biogenesis protein MshJ K12280 mshJ; MSHA biogenesis protein MshJ
D VP2705 MSHA biogenesis protein MshK K12281 mshK; MSHA biogenesis protein MshK
D VP2704 MSHA biogenesis protein MshL K12282 mshL; MSHA biogenesis protein MshL
D VP2703 MSHA biogenesis protein MshM K12283 mshM; MSHA biogenesis protein MshM
D VP2702 MSHA biogenesis protein MshN K12284 mshN; MSHA biogenesis protein MshN
D VP2694 putative type IV prepilin, MshO K12285 mshO; MSHA biogenesis protein MshO
D VP2693 putative MshP protein K12286 mshP; MSHA biogenesis protein MshP
D VP2692 hypothetical protein K12287 mshQ; MSHA biogenesis protein MshQ
D VP2618 FkuB K02221 yggT; YggT family protein
D VP0922 conserved hypothetical protein K02237 comEA; competence protein ComEA
D VPA1192 putative deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D VP0981 Rec2-related protein K02238 comEC; competence protein ComEC
D VP1696 putative type III secretion protein YscC K03219 yscC; type III secretion protein C
D VPA1339 putative type III secretion system EscC protein K03219 yscC; type III secretion protein C
D VP1695 putative type III export protein PscD K03220 yscD; type III secretion protein D
D VP1694 type III export protein YscF K03221 yscF; type III secretion protein F
D VP1691 type III export protein K04053 yscI; type III secretion protein I
D VP1690 putative type III secretion lipoprotein K03222 yscJ; type III secretion protein J
D VP1689 putative type III secretion protein K04054 yscK; type III secretion protein K
D VP1688 putative type III secretion protein K03223 yscL; type III secretion protein L
D VP1668 ATP synthase in type III secretion system K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D VPA1338 putative ATPase YscN K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D VP1669 putative type III secretion protein YscO K04056 yscO; type III secretion protein O
D VP1670 putative translocation protein in type III secretion K04057 yscP; type III secretion protein P
D VP1671 putative translocation protein in type III secretion K03225 yscQ; type III secretion protein Q
D VP1672 translocation protein in type III secretion K03226 yscR; type III secretion protein R
D VP1673 translocation protein in type III secretion K03227 yscS; type III secretion protein S
D VP1674 translocation protein in type III secretion K03228 yscT; type III secretion protein T
D VP1675 translocation protein in type III secretion K03229 yscU; type III secretion protein U
D VP1662 low calcium response protein K03230 yscV; type III secretion protein V
D VPA1355 putative type III secretion system EscV protein K03230 yscV; type III secretion protein V
D VP1667 putative outer membrane protein PopN K04058 yscW; type III secretion protein W
D VP1664 putative type III secretion protein K04059 yscX; type III secretion protein X
D VP1697 putative type III export apparatus protein NosA K04049 yscB; type III secretion protein B
D VP1693 putative type III secretion protein K04051 yscG; type III secretion protein G
D VP1692 putative type III export protein K04052 yscH; type III secretion protein H
D VP1663 putative YscY K04060 yscY; type III secretion protein Y
D VP2235 polar flagellar assembly protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VPA1546 flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D VP2236 polar flagellar assembly protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VPA1545 flagellar biosynthetic protein K02401 flhB; flagellar biosynthesis protein FlhB
D VPA1536 putative flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D VP2249 polar flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VP2247 polar flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VPA1534 putative flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D VP2246 polar flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPA1533 putative flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPA1541 flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D VP2241 polar flagellar switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VP2240 polar flagellar assembly protein FliO K02418 fliO; flagellar protein FliO/FliZ
D VPA1542 putative flagellar assembly protein K02419 fliP; flagellar biosynthesis protein FliP
D VP2239 polar flagellar assembly protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VPA1543 flagellar biosynthetic protein K02420 fliQ; flagellar biosynthesis protein FliQ
D VP2238 polar flagellar assembly protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VP2237 polar flagellar assembly protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VPA1544 putative flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VP0510 thiol:disulfide interchange protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D VPA1039 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D VP1408 putative IcmF-related protein K11891 impL; type VI secretion system protein ImpL
D VP1414 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D VPA1040 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D VPA1041 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D VP1413 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D VP1406 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D VPA1029 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D VPA1030 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D VP1405 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D VPA1031 hypothetical protein K11897 impF; type VI secretion system protein ImpF
D VPA1034 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D VP1403 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D VPA1035 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D VP1402 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D VPA1036 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D VP1393 BfdA K11903 hcp; type VI secretion system secreted protein Hcp
D VPA1027 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D VP1394 putative VgrG protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VPA1026 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D VP1404 hypothetical protein K11905 K11905; type VI secretion system protein
D VP1412 hypothetical protein K11906 vasD; type VI secretion system protein VasD
D VPA1042 hypothetical protein K11906 vasD; type VI secretion system protein VasD
D VPA1028 putative ClpA/B-type chaperone K11907 vasG; type VI secretion system protein VasG
D VP1392 putative ClpA/B-type protease K11907 vasG; type VI secretion system protein VasG
D VP1401 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D VP1409 hypothetical protein K11911 vasL; type VI secretion system protein VasL
D VPA1038 hypothetical protein K11890 impM; type VI secretion system protein ImpM
D VPA1043 hypothetical protein K11894 impI; type VI secretion system protein ImpI
D VP1411 hypothetical protein K11894 impI; type VI secretion system protein ImpI
D VPA1032 hypothetical protein K11898 impE; type VI secretion system protein ImpE
D VPA1033 hypothetical protein K11899 impD; type VI secretion system protein ImpD
D VP1391 putative transcriptional regulator K11914 sfa2; sigma-54 dependent transcriptional regulator
D VPA1505 CsuC K07346 fimC; fimbrial chaperone protein
D VPA1504 CsuD K07347 fimD; outer membrane usher protein
D VPA1503 CsuE K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPA1507 CsuA K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPA1506 CsuB K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VP0467 SecA protein K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D VP2831 protein-transport protein SecB K03071 secB; preprotein translocase subunit SecB
D VP0590 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VPA1209 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D VP2928 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D VP0591 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VPA1208 putative protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D VP2460 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D VP0277 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D VP2534 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D VP2956 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D VP0589 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D VP0003 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D VP0098 TatA protein K03116 tatA; sec-independent protein translocase protein TatA
D VP0099 conserved hypothetical protein K03117 tatB; sec-independent protein translocase protein TatB
D VP0100 conserved hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:vpa02042]
D VP1558 bacteriophage f237 ORF7 K10954 zot; zona occludens toxin
D VP0902 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VP2912 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VP2536 putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D VPA1314 thermostable direct hemolysin A K11019 tdh; thermostable direct hemolysin
D VPA1378 thermostable direct hemolysin S K11019 tdh; thermostable direct hemolysin
D VP3048 putative hemolysin III K11068 hlyIII; hemolysin III
D VPA0226 lecithin-dependent hemolysin (LDH) K11018 tlh; thermolabile hemolysin
D VPA0459 collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
D VP1340 collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
C 02022 Two-component system [BR:vpa02022]
D VP0570 histidine protein kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D VP0569 DNA-binding response regulator PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D VP0155 osmolarity sensor protein EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D VP0154 transcriptional regulator OmpR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D VPA1277 sensor histidine kinase K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D VPA1276 putative DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D VP2859 sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D VP2858 transcriptional regulator CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D VP0362 putative two component sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VP0361 putative two component response regulator transcription regulator protein K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VP1735 putative two-component sensor K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D VP1734 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D VPA1432 putative two-component response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D VPA0675 sensor protein TorS K07647 torS; two-component system, OmpR family, sensor histidine kinase TorS [EC:2.7.13.3]
D VP1032 DNA-binding response regulator TorR K07772 torR; two-component system, OmpR family, torCAD operon response regulator TorR
D VP0487 sensor histidine kinase FexB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D VP0489 aerobic respiration control protein FexA K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D VP1212 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D VPA1665 putative two-component response regulator K02483 K02483; two-component system, OmpR family, response regulator
D VP1907 transcriptional regulator, LuxR family K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D VPA1196 nitrate/nitrite sensor protein NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3]
D VPA1195 nitrate/nitrite response regulator protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D VPA0965 putative sensor histidine protein kinase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D VPA0964 response regulator (repressor) in two-component regulatory system with UhpB (LuxR/UhpA family) K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D VP2567 sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D VP1945 transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D VPA0736 putative sensory box sensor histidine kinase/response regulator VieS K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D VPA0738 putative fimbrial protein Z, transcriptional regulator (LuxR/UhpA family) K07690 evgA; two-component system, NarL family, response regulator EvgA
D VPA0741 putative fimbrial protein Z, transcriptional regulator (LuxR/UhpA family) K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D VP1908 sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D VPA0764 putative transcriptional regulator CitB K07702 dpiA; two-component system, CitB family, response regulator CitB
D VP1712 putative sensor kinase CitA K02476 K02476; two-component system, CitB family, sensor kinase [EC:2.7.13.3]
D VP1711 response regulator K02475 K02475; two-component system, CitB family, response regulator
D VP0539 conserved hypothetical protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D VP0538 response regulator K02477 K02477; two-component system, LytTR family, response regulator
D VP0119 nitrogen regulation protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D VP0118 nitrogen regulation protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D VPA0826 putative phosphoglycerate transport regulatory protein PgtB K08475 pgtB; two-component system, NtrC family, phosphoglycerate transport system sensor histidine kinase PgtB [EC:2.7.13.3]
D VPA0827 phosphoglycerate transport system transcriptional regulatory protein PgtA K08476 pgtA; two-component system, NtrC family, phosphoglycerate transport system response regulator PgtA
D VP0915 C4-dicarboxylate transport sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VPA1731 putative C4-dicarboxylate transport sensor protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D VP0914 C4-dicarboxylate transport transcriptional regulatory protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VPA0183 C4-dicarboxylate transport transcriptional regulatory protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D VP1503 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D VP2229 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VP2231 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VP1376 putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VP2228 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VP0773 chemotaxis CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPA0431 putative chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPA0746 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VP2037 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPA1220 sensor protein LuxQ K10909 luxQ; two-component system, autoinducer 2 sensor kinase/phosphatase LuxQ [EC:2.7.13.3 3.1.3.-]
D VPA0710 sensor histidine kinase/response regulator LuxN K10916 cqsS; two-component system, CAI-1 autoinducer sensor kinase/phosphatase CqsS [EC:2.7.13.3 3.1.3.-]
D VP1968 sensor protein LuxN K15850 luxN; two-component system, autoinducer 1 sensor kinase/phosphatase LuxN [EC:2.7.13.3 3.1.3.-]
D VP2098 phosphorelay protein K10911 luxU; two-component system, phosphorelay protein LuxU
D VP2099 LuxO repressor protein K10912 luxO; two-component system, repressor protein LuxO
D VP2010 putative tetrathionate reductase complex: sensory transduction histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VP1201 putative sensor-kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3]
D VP2009 putative tetrathionate reductase complex: response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D VP1202 putative two-component response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D VP2252 FlaL K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VP2251 FlaM K10943 flrC; two-component system, response regulator FlrC
D VPA1060 putative two-component response regulatory protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
D VP2478 sensory box sensor histidine kinase/response regulator K19694 chiS; two-component system, sensor histidine kinase ChiS
C 02035 Bacterial motility proteins [BR:vpa02035]
D VP2229 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D VP2225 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D VP2226 conserved hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW
D VP2730 conserved hypothetical protein K03409 cheX; chemotaxis protein CheX
D VP0774 chemotaxis methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D VP2228 chemotaxis protein CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D VP2231 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VP1376 putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D VP2230 chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D VP0773 chemotaxis CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPA0431 putative chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPA0746 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VP2037 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D VPA1189 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1904 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1000 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1892 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0511 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1486 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0491 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP0963 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP0421 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1651 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0554 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0842 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1462 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1449 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1185 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VP1088 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VP0183 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA1492 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0562 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VPA0024 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0612 putative chemotaxis transducer K03406 mcp; methyl-accepting chemotaxis protein
D VP1628 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP1981 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP2629 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP2827 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D VP2159 putative methyl-accepting chemotaxis transmembrane protein K03406 mcp; methyl-accepting chemotaxis protein
D VPA0596 putative methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VPA1182 methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D VP2247 polar flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D VPA1534 putative flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D VP2246 polar flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VPA1533 putative flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D VP2245 polar flagellar assembly protein FliJ K02413 fliJ; flagellar protein FliJ
D VP2240 polar flagellar assembly protein FliO K02418 fliO; flagellar protein FliO/FliZ
D VPA1542 putative flagellar assembly protein K02419 fliP; flagellar biosynthesis protein FliP
D VP2239 polar flagellar assembly protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D VPA1543 flagellar biosynthetic protein K02420 fliQ; flagellar biosynthesis protein FliQ
D VP2238 polar flagellar assembly protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D VP2237 polar flagellar assembly protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VPA1544 putative flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D VP2235 polar flagellar assembly protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D VPA1546 flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D VP2236 polar flagellar assembly protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D VPA1545 flagellar biosynthetic protein K02401 flhB; flagellar biosynthesis protein FlhB
D VPA1535 putative flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D VP2248 polar flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D VP2242 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D VPA1541 flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D VP2241 polar flagellar switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D VPA1536 putative flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D VP2249 polar flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D VP0783 flagellar P-ring protein precursor FlgI K02394 flgI; flagellar P-ring protein FlgI
D VPA0271 putative flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D VP0772 polar flagellar FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VPA0263 LfgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D VP0782 flagellar L-ring protein precursor FlgH K02393 flgH; flagellar L-ring protein FlgH
D VPA0270 putative flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D VP2243 polar flagellar protein FliL K02415 fliL; flagellar protein FliL
D VP2950 putative flagellar protein FliL K02415 fliL; flagellar protein FliL
D VPA1554 LafF K02415 fliL; flagellar protein FliL
D VPA1537 putative flagellar hook-basal body complex protein K02408 fliE; flagellar hook-basal body complex protein FliE
D VP2250 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D VP2244 polar flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D VPA1553 LafE K02414 fliK; flagellar hook-length control protein FliK
D VP0775 polar flagellar FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D VPA0264 LfgB K02387 flgB; flagellar basal-body rod protein FlgB
D VP0776 polar flagellar FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D VPA0265 LfgC K02388 flgC; flagellar basal-body rod protein FlgC
D VP0777 polar flagellar FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VPA0266 LfgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D VP0780 polar flagellar FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D VPA0268 putative flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D VP0781 polar flagellar FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D VPA0269 putative flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D VP0784 peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D VPA0272 putative flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D VP0778 polar flagellar FlgE K02390 flgE; flagellar hook protein FlgE
D VPA0267 LfgE K02390 flgE; flagellar hook protein FlgE
D VP0785 polar flagellar hook associated protein type 1 FlgK K02396 flgK; flagellar hook-associated protein 1
D VPA0273 putative flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D VP0786 hook-associated protein type 3 FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL
D VPA0274 putative flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D VPA0261 LfgN K02399 flgN; flagellar biosynthesis protein FlgN
D VP0770 polar flagellar FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D VP0767 conserved hypothetical protein K24343 flgT; flagellar H-ring protein FlgT
D VP0768 conserved hypothetical protein K24344 flgO; flagellar H-ring protein FlgO
D VP0769 conserved hypothetical protein K09860 flgP; outer membrane protein FlgP
D VP2811 sodium-type polar flagellar protein MotX K21217 motX; sodium-type polar flagellar protein MotX
D VP2111 sodium-type flagellar protein MotY K21218 motY; sodium-type flagellar protein MotY
D VPA1539 putative sodium-type flagellar protein MotY precursor K21218 motY; sodium-type flagellar protein MotY
D VP0788 polar flagellin FlaC K02406 fliC; flagellin
D VP0790 polar flagellin FlaD K02406 fliC; flagellin
D VP2259 polar flagellin D K02406 fliC; flagellin
D VP0791 polar flagellin FlaE K02406 fliC; flagellin
D VPA1548 lateral flagellin LafA K02406 fliC; flagellin
D VP2258 polar flagellin FlaA K02406 fliC; flagellin
D VP2261 polar flagellin F K02406 fliC; flagellin
D VPA1550 flagellar distal capping protein homolog LafB K02407 fliD; flagellar hook-associated protein 2
D VP2256 flagellar hook-associated protein 2 FlaH K02407 fliD; flagellar hook-associated protein 2
D VPA1551 LafC K02422 fliS; flagellar secretion chaperone FliS
D VP2254 polar flagellar protein FlaJ K02422 fliS; flagellar secretion chaperone FliS
D VPA1555 flagellar-specific transcription initiation factor sigma, LafS K02405 fliA; RNA polymerase sigma factor FliA
D VP2232 flagellar-specific RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D VP0689 sodium-driven polar flagellar protein MotA K02556 motA; chemotaxis protein MotA
D VPA1556 chemotaxis LafT protein K02556 motA; chemotaxis protein MotA
D VP0690 sodium-driven polar flagellar protein MotB K02557 motB; chemotaxis protein MotB
D VPA1557 chemotaxis LafU protein K02557 motB; chemotaxis protein MotB
D VP2253 polar flagellar protein FlaK K10941 flrA; sigma-54 dependent transcriptional regulator, flagellar regulatory protein
D VP2252 FlaL K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3]
D VP2251 FlaM K10943 flrC; two-component system, response regulator FlrC
D VP0771 polar flagellar FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VPA0262 LfgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D VP2257 flagellin FlaG K06603 flaG; flagellar protein FlaG
D VP2255 polar flagellar rod protein FlaI K06604 flaI; flagellar protein FlaI
D VP2234 flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D VP2233 flagellar biosynthesis protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D VP2615 twitching motility protein PilT K02669 pilT; twitching motility protein PilT
D VP2614 twitching motility protein PilT K02670 pilU; twitching motility protein PilU
D VP2523 type IV pilin PilA K02650 pilA; type IV pilus assembly protein PilA
D VP2524 type IV pilin assembly protein PilB K02652 pilB; type IV pilus assembly protein PilB
D VP2525 type IV pilin biogenesis protein PilC K02653 pilC; type IV pilus assembly protein PilC
D VP2526 type IV prepilin-like proteins leader peptide processing enzyme K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D VP1752 putative fimbrial biogenesis and twitching motility protein K02656 pilF; type IV pilus assembly protein PilF
D VP2746 fimbrial assembly protein K02666 pilQ; type IV pilus assembly protein PilQ
D VP2747 putative fimbrial assembly protein PilP K02665 pilP; type IV pilus assembly protein PilP
D VP2748 putative fimbrial assembly protein PilO K02664 pilO; type IV pilus assembly protein PilO
D VP2749 putative fimbrial assembly protein PilN K02663 pilN; type IV pilus assembly protein PilN
D VP2750 putative fimbrial assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D VP0660 putative type IV pilin K02671 pilV; type IV pilus assembly protein PilV
D VP0658 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D VP0656 putative fimbrial assembly protein PilE K02655 pilE; type IV pilus assembly protein PilE
D VP2423 putative fimbrial protein K02651 flp; pilus assembly protein Flp/PilA
D VPA0719 hypothetical protein K02651 flp; pilus assembly protein Flp/PilA
D VP2422 hypothetical protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D VPA0718 putative membrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D VP2420 putative pilus assembly protein K02279 cpaB; pilus assembly protein CpaB
D VPA0720 hypothetical protein K02279 cpaB; pilus assembly protein CpaB
D VP2419 putative pilus assembly transmembrane protein K02280 cpaC; pilus assembly protein CpaC
D VPA0721 rough colony protein RcpA K02280 cpaC; pilus assembly protein CpaC
D VP2413 putative pilus assembly protein K02282 cpaE; pilus assembly protein CpaE
D VPA0723 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D VPA0724 TadA K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VP2412 putative pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D VPA1505 CsuC K07346 fimC; fimbrial chaperone protein
D VPA1504 CsuD K07347 fimD; outer membrane usher protein
D VPA1503 CsuE K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPA1507 CsuA K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D VPA1506 CsuB K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:vpa04812]
D VP2691 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VP0464 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VP0463 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D VP0874 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D VP0873 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D VP0872 cell division topological specificity factor K03608 minE; cell division topological specificity factor
D VP3078 ParA family protein K03496 parA; chromosome partitioning protein
D VP2227 Soj-like protein K03496 parA; chromosome partitioning protein
D VPA1752 ParA family protein K03496 parA; chromosome partitioning protein
D VP3077 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D VPA1751 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:vpa04147]
D VP0821 heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D VP2561 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D VP2157 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VPA1230 glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D VP2600 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D VP0356 pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VPA0823 pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VP2039 pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D VP2355 peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D VP0580 antioxidant, AhpC/Tsa family K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D VP2851 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VPA0287 chaperonin, 60 kDa subunit K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D VP0653 DnaK protein K04043 dnaK; molecular chaperone DnaK
D VP2731 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D VP0616 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D VP2930 elongation factor TU K02358 tuf; elongation factor Tu
D VP2770 elongation factor TU K02358 tuf; elongation factor Tu
D VP1816 putative Hit protein involved in cell-cycle regulation K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VP0964 Hit family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D VPA0147 Lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D VP0870 long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VPA1152 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP0351 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP1964 putative long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D VP0526 NptA protein K14683 SLC34A; solute carrier family 34 (sodium-dependent phosphate cotransporter)
D VPA0620 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1123 putative acyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VPA1204 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D VP0822 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D VP2180 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D VP2757 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D VP0313 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D VP2398 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D VPA1618 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D VP2386 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D VP0121 glutamate-ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D VP0104 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D VP1349 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D VPA0577 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D VPA1073 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VP2163 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VP2593 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D VP2896 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D VP2517 dihydrolipoamide dehydrogenase (E3 component of 2-oxoglutarate dehydrogenase complex) K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D VPA1157 electron transfer flavoprotein, alpha-subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D VP1710 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D VP0239 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D VPA1018 lipoprotein Blc K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:vpa02048]
D VPA1388 hypothetical protein K19128 csy2; CRISPR-associated protein Csy2
D VPA1389 hypothetical protein K19129 csy3; CRISPR-associated protein Csy3
D VPA1390 hypothetical protein K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D VP0395 type I restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D VP0387 putative HsdS polypeptide, part of CfrA family K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D VP0388 type I restriction enzyme M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D VP2742 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D VP0394 haemagglutinin associated protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D VP0400 putative transmembrane protein K07448 mrr; restriction system protein
D VP1820 hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D VP1821 putative YefM protein K19159 yefM; antitoxin YefM
D VP0402 putative Y4mE K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D VP2144 putative transcription regulator protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D VP1175 phage shock protein C K03973 pspC; phage shock protein C
D VP1174 phage shock protein B K03970 pspB; phage shock protein B
D VP0464 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D VP2691 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D VP0431 DNA topoisomerase IV K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D VP0430 topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D VP0762 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D VP2582 conserved hypothetical protein K09159 cptB; antitoxin CptB
D VP0596 aminotransferase NifS, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:vpa04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:vpa04090]
C 01504 Antimicrobial resistance genes [BR:vpa01504]
D VPA0477 beta-lactamase K19217 blaCARB-17; beta-lactamase class A CARB-17 [EC:3.5.2.6]
D VP1134 conserved hypothetical protein K18218 tet35; tetracycline resistance efflux pump
D VPA0028 antibiotic acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D VPA1748 chloramphenicol acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D VPA0095 hypothetical protein K18555 qnr; fluoroquinolone resistance protein
D VP0362 putative two component sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D VP0361 putative two component response regulator transcription regulator protein K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D VP1091 putative transmembrane protein affecting septum formation and cell membrane permeability K03585 acrA; membrane fusion protein, multidrug efflux system
D VPA1191 putative multidrug efflux membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP0039 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP0940 conserved hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system
D VP1092 acridine efflux pump K18138 acrB; multidrug efflux pump
D VP0038 putative multidrug resistance protein K18138 acrB; multidrug efflux pump
D VPA0471 putative multidrug efflux membrane fusion protein K18138 acrB; multidrug efflux pump
D VPA1190 putative acriflavin resistance protein K18138 acrB; multidrug efflux pump
D VPA0362 putative outer membrane protein K18300 oprN; outer membrane protein, multidrug efflux system
D VPA0662 transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D VP0425 outer membrane protein TolC K12340 tolC; outer membrane protein
D VPA0738 putative fimbrial protein Z, transcriptional regulator (LuxR/UhpA family) K07690 evgA; two-component system, NarL family, response regulator EvgA
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:vpa00537]
D VPA1073 putative alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D VP2163 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:vpa03100]
D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-5 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-10 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-11 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-6 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-7 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-8 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-9 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-3 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-4 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-5 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-4 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-5 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-6 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys-1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Cys-2 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Cys-3 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Cys-4 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-3 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-4 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-5 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-6 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-4 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-5 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-6 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-11 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-13 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-10 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-12 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-5 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-6 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-7 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-8 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-9 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His-1 tRNA-His K14226 tRNA-His; tRNA His
D tRNA-His-2 tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-10 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-7 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-8 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-9 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-15 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-16 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-11 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-12 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-14 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-13 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-3 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-4 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-10 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-11 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-4 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-5 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-6 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-7 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-8 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-9 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-2 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-3 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-4 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-6 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-6 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-5 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-4 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-7 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp-1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Trp-2 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-2 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-3 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-4 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-5 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-6 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-7 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-4 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-5 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-6 tRNA-Val K14237 tRNA-Val; tRNA Val
D 16Sd 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sa 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sk 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Si-2 16Si; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sg 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sl 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Si-1 16Si; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sf 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sj 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Sb 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 16Se 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D 23Sb 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Se 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sa 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sf 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Si 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sh 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sg 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sk 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sd 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sj 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 23Sl 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D 5Sa 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sj 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Se 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sk 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sh 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sl 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sd 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sg 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sf 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Si 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sb 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D 5Sc 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D VPA0565 putative glucose dehydrogenase-B K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D VPA0761 aldehyde dehydrogenase K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D VP2970 glyceraldehyde 3-phosphate dehydrogenase K25224 gapdh; glyceraldehyde-3-phosphate dehydrogenase (arsenate-transferring) [EC:1.2.1.107]
D VP2151 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D VPA1416 putative oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D VPA1155 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D VPA0643 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D VP2542 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D VP1452 acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D VPA1684 alkyl hydroperoxide reductase, subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D VP2016 hypothetical protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D VP0306 peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D VPA0301 putative peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D VPA0207 peptide methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D VP2156 PilB-related protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D VPA1298 putative glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D VP2086 putative glutathione S-transferase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D VP1718 cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D VPA1101 putative cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D VPA0446 putative methylamine utilization protein MauG precursor K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D VP2275 bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D VPA1683 alkyl hydroperoxide reductase c22 protein K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D VPA1681 putative organic hydroperoxide resistance protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D VP2262 TyrA protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D VPA0042 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D VP2809 flavohemoprotein (flavohemoglobin) K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D VP0077 ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D VPA1586 putative ferredoxin-NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D VP2279 arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D VPA0940 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D VPA1568 putative pyruvate formate-lyase 3 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VP0992 pyruvate formate-lyase 1 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D VP1188 putative ferredoxin oxidoreductase protein K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D VP2555 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D VP1123 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D VPA0427 coproporphyrinogen oxidase homolog PhuW K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D VP1758 galactoside O-acetyltransferase K00633 lacA; galactoside O-acetyltransferase [EC:2.3.1.18]
D VPA1135 putative acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D VPA0209 hexapeptide-repeat containing-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D VPA0072 putative N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D VP0729 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D VP2444 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D VP2648 putative acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D VPA1571 putative acetyltransferase K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D VP1373 putative acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D VP1018 leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D VP1017 arginyl-tRNA-protein transferase-related protein K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D VP1493 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VP0923 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VP2978 hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D VP0523 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D VP2345 thiamin biosynthesis lipoprotein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D VPA0373 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D VP0423 glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D VP0909 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D VP1686 hypothetical protein K26088 vopS; protein adenylyltransferase VopS [EC:2.7.7.108]
D VPA0103 hypothetical protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D VPA1587 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VP1056 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VP0888 hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D VP1954 putative metal-dependent phosphoesterase YciV K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D VP2205 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D VPA0594 hypothetical protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D VP1378 putative HD-GYP domain containing protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D VP2609 extracellular deoxyribonuclease precursor K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D VP0103 conserved hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VP2047 putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VP2439 putative hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D VP0837 putative esterase/lipase YbfF K01175 ybfF; esterase [EC:3.1.-.-]
D VP0674 conserved hypothetical protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D VPA0832 chitodextrinase K21606 endo_I; endo-chitodextinase [EC:3.2.1.202]
D VPA0102 putative isomerase K03931 ygjK; glucosidase [EC:3.2.1.-]
D VPA0784 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D VP3042 polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D VP2638 deacetylase DA1 K18454 deaA; chitin disaccharide deacetylase [EC:3.5.1.105]
D VP2685 putative carbon-nitrogen hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D VPA1414 conserved hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D VP2656 conserved hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D VP0420 conserved hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D VP2060 Maf/YceF/YhdE family protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D VPA0685 MoxR-related protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VPA1450 MoxR-related protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VPA1009 conserved hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D VPA1569 putative transaldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D VPA1160 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D VPA0234 aminotransferase, class III K26913 pbfA; (R)-1-hydroxy-2-aminoethylphosphonate ammonia-lyase [EC:4.3.1.33]
D VP2365 aminotransferase, class V K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D VPA0545 peptidyl-prolyl cis-trans isomerase-related protein K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D VP0314 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D VP1477 DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
D VP2105 RnfD-related protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D VP2104 RnfC-related protein K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D VP2103 RnfB-related protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D VP2351 sodium-translocating NADH-quinone reductase, subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D VP2350 sodium-translocating NADH-quinone reductase, subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D VP2349 sodium-translocating NADH-quinone reductase, subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D VP2348 sodium-translocating NADH-quinone reductase, subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D VP2347 sodium-translocating NADH-quinone reductase, subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D VP2346 sodium-translocating NADH-quinone reductase, subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D VP1539 cation transport ATPase, E1-E2 family K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D VP0959 cation transport ATPase, E1-E2 family K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D VP2499 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D VPA0674 periplasmic protein TorT K11930 torT; periplasmic protein TorT
D VP0585 putative acetoin utilization protein AcuB K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D VPA0962 putative formate dehydrogenase oxidoreductase protein K02379 fdhD; FdhD protein
D VP1506 formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D VP0601 ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D VP0955 ferredoxin K05524 fdxA; ferredoxin
D VP1936 putative iron-sulfur cluster-binding protein K11107 yfaE; ferredoxin
D VP2106 RnfG-related protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D VP2107 RnfE-related protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D VP2102 RnfA-related protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D VP0001 MioC protein K06205 mioC; MioC protein
D VP0508 flavodoxin 2 K03840 fldB; flavodoxin II
D VP0597 NifU-related protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D VPA1526 hypothetical protein K15536 cybC; soluble cytochrome b562
D VPA1198 NapD protein K02570 napD; periplasmic nitrate reductase NapD
D VPA1197 iron-sulfur cluster-binding protein NapF K02572 napF; ferredoxin-type protein NapF
D VP1160 NapE protein K02571 napE; periplasmic nitrate reductase NapE
D VP0835 flavodoxin 1 K03839 fldA; flavodoxin I
D VPA1201 periplasmic nitrate reductase, cytochrome c-type protein K02569 napC; cytochrome c-type protein NapC
D VPA1486 ferredoxin-type protein K02573 napG; ferredoxin-type protein NapG
D VPA1485 ferredoxin-type protein NapH K02574 napH; ferredoxin-type protein NapH
D VPA1156 electron transfer flavoprotein, beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
D VP1928 cytochrome c-type protein NrfB precursor K04013 nrfB; cytochrome c-type protein NrfB
D VP1927 nitrite reductase, Fe-S protein (NrfC) K04014 nrfC; protein NrfC
D VP1926 nitrate reductase, formate dependent (NrfD) K04015 nrfD; protein NrfD
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D VP0798 CysZ protein K06203 cysZ; CysZ protein
D VPA1523 glyoxylase I family protein K08234 yaeR; glyoxylase I family protein
D VPA1740 hypothetical protein K14054 mpaA; murein peptide amidase A
D VP2616 FkuA K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D VP2028 conserved hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D VP2027 putative heat shock protein K19804 lapB; lipopolysaccharide assembly protein B
D VP0210 putative Lex2B K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D VPA0504 putative kinase K02173 yggC; putative kinase
D VP2991 HemY protein K02498 hemY; HemY protein
D VP0097 putative ubiquinone biosynthesis protein AarF K03688 ubiB; ubiquinone biosynthesis protein
D VP0096 conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D VP0036 conserved hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D VP2445 putative lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D VP2329 efflux pump component MtrF K12942 abgT; aminobenzoyl-glutamate transport protein
D VP0662 conserved hypothetical protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
D VPA0043 conserved hypothetical protein K15977 K15977; putative oxidoreductase
D VP3017 putative transmembrane protein K15977 K15977; putative oxidoreductase
D VPA0884 putative acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D VP1889 cold shock transcriptional regulator CspA K03704 cspA; cold shock protein
D VP1012 cold shock-like protein CspD K03704 cspA; cold shock protein
D VPA1289 cold shock transcriptional regulator CspA K03704 cspA; cold shock protein
D VPA0552 cold shock DNA-binding domain protein K03704 cspA; cold shock protein
D VP2920 regulator of sigma D K07740 rsd; regulator of sigma D
D VP2493 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D VP0150 conserved hypothetical protein K06959 tex; protein Tex
C 99974 Translation
D VP0238 conserved hypothetical protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D VP1203 heat shock protein HslJ K03668 hslJ; heat shock protein HslJ
D VP1013 conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D VP0916 trigger factor K03545 tig; trigger factor
D VP0644 small protein B K03664 smpB; SsrA-binding protein
D VP3057 ComM-related protein K07391 comM; magnesium chelatase family protein
D VP1422 SM-20-related protein K07394 K07394; SM-20-related protein
D VP2116 hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D VPA0063 hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D VPA0208 conserved hypothetical protein K07397 yhfA; putative redox protein
D VP0146 conserved hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA
D VP0817 selenoprotein W-related protein K07401 K07401; selenoprotein W-related protein
D VPA1105 putative membrane protein K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D VP0951 methylated-DNA-protein-cysteine methyltransferase-related protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D VP0697 exodeoxyribonuclease IX K01146 xni; protein Xni
D VP0184 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D VP0094 conserved hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D VPA0854 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D VP0448 hypothetical protein K07460 yraN; putative endonuclease
D VPA1222 conserved hypothetical protein K07461 K07461; putative endonuclease
D VP3040 Smf protein K04096 smf; DNA processing protein
D VP1107 conserved hypothetical protein K07478 ycaJ; putative ATPase
D VP3038 DNA topoisomerase I-related protein K07479 yrdD; putative DNA topoisomerase
D VP1788 putative transposase K07483 K07483; transposase
D VPA1395 putative transposase K07497 K07497; putative transposase
D VP1787 putative transposase K07497 K07497; putative transposase
D VP2136 putative pore-forming cytotoxin integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D VP1173 phage shock protein A K03969 pspA; phage shock protein A
D VPA0284 phage shock protein E K03972 pspE; phage shock protein E
D VPA1572 hypothetical protein K07504 K07504; predicted type IV restriction endonuclease
D VP2178 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
D VPA0203 deoxyribodipyrimidine photolyase K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D VP0941 putative multidrug resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D VP1723 transporter, BCCT family K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D VP1905 transporter, BCCT family K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D VP0824 putative permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D VP0418 pho4 family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D VP2043 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VP1184 putative sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VP2337 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D VP0503 sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VP0622 sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VP1741 sodium/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D VP0507 branched chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D VP0878 NupC family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VP2437 NupC family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VPA0195 NupC family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D VPA0762 putative 2-oxoglutarate/malate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D VP1232 conserved hypothetical protein K07085 K07085; putative transport protein
C 99978 Cell growth
D VP1970 intracellular sepatation protein A K06190 ispZ; intracellular septation protein
D VP3049 SpoOM-related protein K06377 spo0M; sporulation-control protein
D VP1278 putative SpoOM-related protein K06377 spo0M; sporulation-control protein
D VP2834 NlpD-related protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D VP0967 conserved hypothetical protein K07337 K07337; penicillin-binding protein activator
D VP1028 conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D VP1241 conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D VP0702 Syd protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D VP1607 putative activator of ProP osmoprotectant transporter K03607 proQ; ProP effector
D VP0076 universal stress protein A K06149 uspA; universal stress protein A
D VP1535 putative stress protein K14055 uspE; universal stress protein E
D VP0319 conserved hypothetical protein K14061 uspF; universal stress protein F
D VP0122 BipA protein K06207 typA; GTP-binding protein
D VP2357 putative transcriptional activator ChrR K07167 chrR; putative transcriptional regulator
D VP0732 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D VP2683 conserved hypothetical protein K07175 phoH2; PhoH-like ATPase
D VP0988 conserved hypothetical protein K07180 prkA; serine protein kinase
D VP1902 conserved hypothetical protein K07182 K07182; CBS domain-containing protein
D VP2876 conserved hypothetical protein K07182 K07182; CBS domain-containing protein
D VPA0075 hypothetical protein K07182 K07182; CBS domain-containing protein
D VP1725 conserved hypothetical protein K07182 K07182; CBS domain-containing protein
D VP0417 conserved hypothetical protein K07184 ygiM; SH3 domain protein
D VP2432 putative smp protein K07186 smp; membrane protein
D VP1617 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D VP1106 outer membrane lipoproteins carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D VP0741 putative outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D VP2214 VacJ lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D VP1192 putative outer membrane lipoprotein Pcp K06077 slyB; outer membrane lipoprotein SlyB
D VP1019 putative outer membrane protein K06077 slyB; outer membrane lipoprotein SlyB
D VP2309 outer membrane protein OmpH K06142 hlpA; outer membrane protein
D VP2554 lipoprotein NlpD K06194 nlpD; lipoprotein NlpD
D VP2451 putative lipoprotein precursor K05803 nlpI; lipoprotein NlpI
D VPA0096 outer membrane protein OmpW K07275 ompW; outer membrane protein
D VP2736 conserved hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D VP0868 putative outer membrane lipoprotein Slp K07285 slp; outer membrane lipoprotein
D VP2354 putative lipoprotein K07286 yajG; uncharacterized lipoprotein
D VP2066 AsmA protein K07289 asmA; AsmA protein
D VP0804 conserved hypothetical protein K07340 ybbJ; inner membrane protein
D VP1714 conserved hypothetical protein K01993 ABC-2.TX; HlyD family secretion protein
D VPA0490 putative membrane protein K01993 ABC-2.TX; HlyD family secretion protein
D VP1999 conserved hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D VP2219 cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D VP2216 putative cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D VP1923 NrfF K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D VP0607 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D VP0577 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D VP2769 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D VPA0856 putative transmembrane transport protein K05794 terC; tellurite resistance protein TerC
D VP0579 copper homeostasis protein K06201 cutC; copper homeostasis protein
D VP0335 ApaG protein K06195 apaG; ApaG protein
D VP2986 CyaY protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D VPA0428 conserved hypothetical protein K07227 chuX; heme iron utilization protein
D VP1920 putative iron-regulated protein A K07231 K07231; putative iron-regulated protein
D VP2390 conserved hypothetical protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D VP2186 bacteriocin production protein K03558 cvpA; membrane protein required for colicin V production
D VP1531 putative Bax protein K03796 bax; Bax protein
D VP2018 paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D VPA1281 oxidoreductase, Gfo/Idh/MocA family K03810 mviM; virulence factor
D VP0287 ElaA protein K02348 elaA; ElaA protein
D VP0081 putative hyperosmotically inducible periplasmic protein K04065 osmY; hyperosmotically inducible periplasmic protein
D VPA0505 putative histidinol phosphatase and related hydrolases of the PHP family K04477 ycdX; putative hydrolase
D VPA1527 conserved hypothetical protein K04477 ycdX; putative hydrolase
D VP0497 formate acetyl transferase-related protein K06866 grcA; autonomous glycyl radical cofactor
D VP2392 methionyl-tRNA synthetase-related protein K06878 K06878; tRNA-binding protein
D VP2496 conserved hypothetical protein K07001 K07001; NTE family protein
D VPA0709 HAD superfamily hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D VPA0123 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D VP0233 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D VP2474 HesB family protein K15724 erpA; iron-sulfur cluster insertion protein
D VPA0790 putative YhfP protein K07038 K07038; inner membrane protein
D VP0125 ribonuclease BN K07058 K07058; membrane protein
D VP2862 FxsA protein K07113 fxsA; UPF0716 protein FxsA
D VP2367 conserved hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D VPA1597 conserved hypothetical protein K07146 K07146; UPF0176 protein
D VP1129 conserved hypothetical protein K07153 hflD; high frequency lysogenization protein
D VPA0705 putative cytoplasmic membrane protein K03744 lemA; LemA protein
D VP2780 SlyX protein K03745 slyX; SlyX protein
D VP3039 Smg protein K03747 smg; Smg protein
D VPA0836 CreA protein K05805 creA; CreA protein
D VP2608 putative SprT protein K02742 sprT; SprT protein
D VP2187 DedD protein K03749 dedD; DedD protein
D VP2743 DamX-related protein K03112 damX; DamX protein
D VP1257 SanA protein K03748 sanA; SanA protein
D VP2017 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D VP1610 PqiA family protein K03808 pqiA; paraquat-inducible protein A
D VPA1624 conserved hypothetical protein K08974 K08974; putative membrane protein
D VPA0865 conserved hypothetical protein K08984 yjdF; putative membrane protein
D VP2977 hypothetical protein K08985 K08985; putative lipoprotein
D VP1065 putative membrane protein K08989 K08989; putative membrane protein
D VP1870 putative membrane protein YcjF K08990 ycjF; putative membrane protein
D VP2958 conserved hypothetical protein K08993 yhhL; putative membrane protein
D VP1145 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D VP0950 lipoprotein-related protein K09914 K09914; putative lipoprotein
D VPA0094 hypothetical protein K11312 K11312; cupin 2 domain-containing protein
D VPA1643 putative maltose operon periplasmic protein K05775 malM; maltose operon periplasmic protein
D VP0175 hypothetical protein K13256 psiE; protein PsiE
D VPA0858 phnA protein K06193 phnA; protein PhnA
C 99997 Function unknown
D VPA0306 AnkB protein K06867 K06867; uncharacterized protein
D VPA0698 putative arylsulfatase regulator K06871 K06871; uncharacterized protein
D VPA0601 putative arylsulfatase regulator K06871 K06871; uncharacterized protein
D VPA0684 putative arylsulfatase regulator K06871 K06871; uncharacterized protein
D VP1678 putative dienelactone hydrolase and related enzymes K06889 K06889; uncharacterized protein
D VP1677 hypothetical protein K06889 K06889; uncharacterized protein
D VP1871 hypothetical protein YcjX K06918 K06918; uncharacterized protein
D VPA1053 conserved hypothetical protein K06934 K06934; uncharacterized protein
D VP1204 conserved hypothetical protein K06938 K06938; uncharacterized protein
D VP2171 putative proteinase inhibitor K06940 K06940; uncharacterized protein
D VPA1245 hypothetical protein K06950 K06950; uncharacterized protein
D VP1121 conserved hypothetical protein K06954 K06954; uncharacterized protein
D VP1302 sodium/dicarboxylate symporter K06956 K06956; uncharacterized protein
D VPA1490 conserved hypothetical protein K06975 K06975; uncharacterized protein
D VP0669 conserved hypothetical protein K06987 K06987; uncharacterized protein
D VPA1015 putative succinate dehydrogenase subunit Sdh K06987 K06987; uncharacterized protein
D VPA0304 conserved hypothetical protein K06996 K06996; uncharacterized protein
D VP1798 conserved hypothetical protein K06996 K06996; uncharacterized protein
D VP0429 conserved hypothetical protein K07000 K07000; uncharacterized protein
D VP0969 conserved hypothetical protein K07000 K07000; uncharacterized protein
D VP1286 putative integral membrane protein K07003 K07003; uncharacterized protein
D VP2799 extracellular nuclease-related protein K07004 K07004; uncharacterized protein
D VPA1238 hypothetical protein K07005 K07005; uncharacterized protein
D VP2130 conserved hypothetical protein K07014 K07014; uncharacterized protein
D VP2376 conserved hypothetical protein K07014 K07014; uncharacterized protein
D VP2790 conserved hypothetical protein K07019 K07019; uncharacterized protein
D VP0693 hypothetical protein K07020 K07020; uncharacterized protein
D VP0620 conserved hypothetical protein K07034 K07034; uncharacterized protein
D VP2074 preprotein translocase SecA subunit-related protein K07039 K07039; uncharacterized protein
D VP1068 hypothetical protein K07039 K07039; uncharacterized protein
D VP2784 hypothetical protein K07070 K07070; uncharacterized protein
D VP0809 putative sugar nucleotide epimerase K07071 K07071; uncharacterized protein
D VP0323 immunogenic protein K07080 K07080; uncharacterized protein
D VP1655 immunogenic protein K07080 K07080; uncharacterized protein
D VPA0188 immunogenic protein K07080 K07080; uncharacterized protein
D VP1006 conserved hypothetical protein K07090 K07090; uncharacterized protein
D VP0474 conserved hypothetical protein K07090 K07090; uncharacterized protein
D VPA0749 conserved hypothetical protein K07090 K07090; uncharacterized protein
D VP1654 hypothetical protein K07090 K07090; uncharacterized protein
D VP0818 putative membrane protein K07090 K07090; uncharacterized protein
D VP0522 conserved hypothetical protein K07090 K07090; uncharacterized protein
D VPA0179 hypothetical protein K07093 K07093; uncharacterized protein
D VP0816 conserved hypothetical protein K07095 K07095; uncharacterized protein
D VP0304 conserved hypothetical protein K07109 K07109; uncharacterized protein
D VPA0220 conserved hypothetical protein K07109 K07109; uncharacterized protein
D VPA0946 conserved hypothetical protein K07112 K07112; uncharacterized protein
D VPA0945 conserved hypothetical protein K07112 K07112; uncharacterized protein
D VP0449 putative lipoprotein K07121 K07121; uncharacterized protein
D VP1266 hypothetical protein K07126 K07126; uncharacterized protein
D VPA0752 glutathione S-transferase-related protein K07136 K07136; uncharacterized protein
D VP0956 conserved hypothetical protein K07137 K07137; uncharacterized protein
D VP0485 conserved hypothetical protein K07139 K07139; uncharacterized protein
D VPA0411 conserved hypothetical protein K07140 K07140; MOSC domain-containing protein
D VP2360 conserved hypothetical protein K07157 K07157; uncharacterized protein
D VP0406 conserved hypothetical protein K09117 K09117; uncharacterized protein
D VP2619 conserved hypothetical protein K09131 K09131; uncharacterized protein
D VP0718 conserved hypothetical protein K09158 K09158; uncharacterized protein
D VP2169 conserved hypothetical protein K09160 K09160; uncharacterized protein
D VP0990 conserved hypothetical protein K09161 K09161; uncharacterized protein
D VP1122 conserved hypothetical protein K09701 K09701; uncharacterized protein
D VPA0257 hemolysin K09712 K09712; uncharacterized protein
D VPA1749 conserved hypothetical protein K09749 K09749; uncharacterized protein
D VP2328 conserved hypothetical protein K09768 K09768; uncharacterized protein
D VP1972 conserved hypothetical protein K09780 K09780; uncharacterized protein
D VPA0406 conserved hypothetical protein K09781 K09781; uncharacterized protein
D VP0986 conserved hypothetical protein K09786 K09786; uncharacterized protein
D VP2181 conserved hypothetical protein K09790 K09790; uncharacterized protein
D VP1537 conserved hypothetical protein K09792 K09792; uncharacterized protein
D VPA0402 hypothetical protein K09794 K09794; uncharacterized protein
D VP0374 conserved hypothetical protein K09797 K09797; uncharacterized protein
D VP0646 conserved hypothetical protein K09801 K09801; uncharacterized protein
D VPA1226 conserved hypothetical protein K09802 K09802; uncharacterized protein
D VP2594 conserved hypothetical protein K09807 K09807; uncharacterized protein
D VPA0243 putative virK protein K09824 virK; uncharacterized protein
D VP2344 conserved hypothetical protein K05952 K05952; uncharacterized protein
D VPA0324 conserved hypothetical protein K05952 K05952; uncharacterized protein
D VP1613 conserved hypothetical protein K00243 K00243; uncharacterized protein
D VP2019 conserved hypothetical protein K09857 K09857; uncharacterized protein
D VP0965 hypothetical protein K09859 K09859; uncharacterized protein
D VP0504 conserved hypothetical protein K09861 K09861; uncharacterized protein
D VP2529 conserved hypothetical protein K09862 K09862; uncharacterized protein
D VP2913 conserved hypothetical protein K09891 K09891; uncharacterized protein
D VP0113 conserved hypothetical protein K09894 K09894; uncharacterized protein
D VP2588 conserved hypothetical protein K09895 K09895; uncharacterized protein
D VP3051 conserved hypothetical protein K09896 K09896; uncharacterized protein
D VPA0040 conserved hypothetical protein K09897 K09897; uncharacterized protein
D VP2791 conserved hypothetical protein K09898 K09898; uncharacterized protein
D VP2081 conserved hypothetical protein K09899 K09899; uncharacterized protein
D VP1949 hypothetical protein K09901 K09901; uncharacterized protein
D VP0875 conserved hypothetical protein K09902 K09902; uncharacterized protein
D VP2129 conserved hypothetical protein K09904 K09904; uncharacterized protein
D VP0863 conserved hypothetical protein K09907 K09907; uncharacterized protein
D VP0434 conserved hypothetical protein K09908 K09908; uncharacterized protein
D VPA1584 hypothetical protein K09909 K09909; uncharacterized protein
D VP1009 hypothetical protein K09909 K09909; uncharacterized protein
D VP2494 conserved hypothetical protein K09910 K09910; uncharacterized protein
D VP1589 putative dehydrogenase K09911 K09911; uncharacterized protein
D VPA0379 putative nucleoprotein/polynucleotide-associated enzyme K09912 K09912; uncharacterized protein
D VPA1223 conserved hypothetical protein K09915 K09915; uncharacterized protein
D VP2154 conserved hypothetical protein K09916 K09916; uncharacterized protein
D VPA0916 conserved hypothetical protein K09917 K09917; uncharacterized protein
D VP2379 DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS K09918 K09918; uncharacterized protein
D VP0427 conserved hypothetical protein K09920 K09920; uncharacterized protein
D VP2982 conserved hypothetical protein K09921 K09921; uncharacterized protein
D VPA0178 hypothetical protein K09923 K09923; uncharacterized protein
D VP1540 hypothetical protein K09926 K09926; uncharacterized protein
D VP0980 conserved hypothetical protein K09928 K09928; uncharacterized protein
D VP3015 hypothetical protein K09930 K09930; uncharacterized protein
D VP2813 conserved hypothetical protein K09937 K09937; uncharacterized protein
D VP2282 hypothetical protein K09938 K09938; uncharacterized protein
D VPA0157 hypothetical protein K09939 K09939; uncharacterized protein
D VP1314 hypothetical protein K09941 K09941; uncharacterized protein
D VP1917 hypothetical protein K09947 K09947; uncharacterized protein
D VP0945 conserved hypothetical protein K09948 K09948; uncharacterized protein
D VP0299 conserved hypothetical protein K09950 K09950; uncharacterized protein
D VPA0582 conserved hypothetical protein K09954 K09954; uncharacterized protein
D VP0753 hypothetical protein K09973 K09973; uncharacterized protein
D VP0840 hypothetical protein K09977 K09977; uncharacterized protein
D VP0419 conserved hypothetical protein K07220 K07220; uncharacterized protein
D VP1918 hypothetical protein K07338 K07338; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 11, 2024