+D GENES KO
#
KEGG Orthology (KO) - Yersinia pestis CO92 (biovar Orientalis)
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ype00010]
D YPO2977 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YPO3718 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YPO0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPO3520 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YPO3960 putative class-II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPO0920 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPO0085 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YPO2157 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YPO0921 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D YPO1133 gpm; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPO0455 gpmB; putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPO0064 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D YPO3376 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YPO2064 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPO2393 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPO2409 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D YPO3419 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YPO3418 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YPO3917 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3417 lpd; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO2334 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D YPO1502 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPO2180 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YPO0253 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YPO0027 conserved hypothetical protein K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D YPO2686 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPO2156 conserved hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D YPO0138 pck; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D YPO0166 putative glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YPO1254 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YPO2995 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YPO1608 glcA; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:ype00020]
D YPO1108 gltA; citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1]
D YPO2221 acn; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YPO3415 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D YPO1641 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D YPO1113 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D YPO1114 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YPO3917 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3417 lpd; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO1116 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YPO1115 b0728; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YPO1111 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPO1112 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPO1109 cybA; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YPO1110 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YPO0360 b4154; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPO0359 b4153; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPO0358 b4152; fumarate reductase hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D YPO0357 b4151; fumarate reductase hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D YPO3335 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YPO3516 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YPO0138 pck; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D YPO3419 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YPO3418 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YPO2334 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:ype00030]
D YPO3718 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YPO2066 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YPO1149 conserved hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D YPO1541 gnd; 6-phosphogluconate dehydrogenase,decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D YPO0155 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D YPO0926 tkt; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YPO3313 C-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YPO3314 putative N-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YPO0463 talB; transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2]
D YPO1292 rpiA; putative ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D YPO0915 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D YPO3353 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D YPO0436 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D YPO1323 deoC; putative deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D YPO3622 putative deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D YPO0008 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D YPO3621 probable carbohydrate kinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D YPO0439 b4383; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D YPO2686 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPO3464 phnN; PhnN protein K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D YPO2013 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D YPO2533 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D YPO2067 eda; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D YPO4078 putative D-isomer specific 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YPO3953 putative gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D YPO2540 gntV; putative thermosensitive gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D YPO3990 kdgK; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D YPO3960 putative class-II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPO0920 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPO3520 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YPO0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ype00040]
D YPO0424 putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D YPO3994 pelY; periplasmic pectate lyase precursor K01728 pel; pectate lyase [EC:4.2.2.2]
D YPO1723 kdgC; exopolygalacturonate lyase K01731 pelW; pectate disaccharide-lyase [EC:4.2.2.9]
D YPO1713 ogl; oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D YPO1725 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D YPO0839 kduD2; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D YPO1724 kduD1; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D YPO0579 uxaC; uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D YPO0580 uxaB; altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D YPO0581 uxaA; altronate hydrolase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D YPO1283 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D YPO1280 putative D-mannonate oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D YPO2174 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YPO1539 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPO1540 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPO3334 lyx; putative L-xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
D YPO3333 sgbU; putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D YPO3326 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YPO2230 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YPO0155 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D YPO2253 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D YPO2254 araB; L-ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D YPO1291 putative carbohydrate kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D YPO4039 xylB; xylulose kinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D YPO4038 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D YPO0330 b3904; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D YPO0328 b3902; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D YPO2325 dalD; putative mannitol dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D YPO3961 hypothetical protein K09988 lyxA; D-lyxose ketol-isomerase [EC:5.3.1.15]
D YPO3637 putative carbohydrate kinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
C 00051 Fructose and mannose metabolism [PATH:ype00051]
D YPO3211 conserved hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YPO2263 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YPO3097 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YPO2479 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YPO3099 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YPO1567 putative racemase K18334 fucD; L-fuconate dehydratase [EC:4.2.1.68]
D YPO1565 putative oxidoreductase K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D YPO0329 b3903; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D YPO0330 b3904; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D YPO0328 b3902; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D YPO0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPO3520 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YPO4067 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D YPO1299 fpk; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D YPO4038 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D YPO2325 dalD; putative mannitol dehydrogenase K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D YPO3960 putative class-II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPO0920 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPO0085 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YPO3353 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D YPO1300 fruA; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D YPO1758 gptB; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YPO1757 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D YPO1756 gptB; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D YPO4068 mtlA; PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YPO2562 putative haloacid dehalogenase-like hydrolase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D YPO2446 conserved hypothetical protein K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
C 00052 Galactose metabolism [PATH:ype00052]
D YPO1137 galA; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YPO1138 galB; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D YPO1139 galD; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YPO1539 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPO1540 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPO2686 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPO2977 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YPO1654 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YPO0852 bgaB; puative beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D YPO1581 rafA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D YPO0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPO0844 agaY; putative aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D YPO0832 agaZ; putative tagatose 6-phosphate kinase K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D YPO0848 putative glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YPO3200 malZ; putative maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YPO0837 putative PTS permease protein K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D YPO0834 manX; putative PTS transport protein K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D YPO0835 putative PTS permease protein K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D YPO0836 putative PTS permease protein K02747 agaE; N-acetylgalactosamine PTS system EIID component
D YPO0838 putative acetylglucosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.25]
D YPO0833 putative phosphosugar isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:ype00053]
D YPO2174 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YPO2569 phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D YPO2782 putative membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D YPO3333 sgbU; putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D YPO3326 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YPO2230 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D YPO3334 lyx; putative L-xylulose kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53]
C 00500 Starch and sucrose metabolism [PATH:ype00500]
D YPO0848 putative glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YPO3200 malZ; putative maltodextrin glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D YPO1539 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPO1540 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPO0616 putative glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YPO2803 bglB; putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YPO2680 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YPO2678 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YPO2679 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D YPO0166 putative glycosyl hydrolase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YPO1254 bglA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D YPO3115 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YPO3940 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D YPO3939 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D YPO3942 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D YPO3938 glgP; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D YPO3941 glgX; putative alpha-amylase K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D YPO4080 malS; alpha-amylase protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D YPO0126 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D YPO2995 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YPO3697 treB; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D YPO3696 olgH; putative trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D YPO2686 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPO2977 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YPO3718 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YPO3211 conserved hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ype00520]
D YPO1615 ycfO; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YPO2995 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YPO2628 nagE; pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YPO1629 conserved hypothetical protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D YPO2626 nagA; putative N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D YPO2627 glmD; putative glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D YPO3211 conserved hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D YPO4118 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YPO3500 mrsA; probable phosphoglucomutase/phosphomannomutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D YPO4119 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D YPO2925 putative glucokinase protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D YPO2372 conserved hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D YPO3569 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YPO3760 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YPO3020 putative sugar kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60]
D YPO3023 conserved hypothetical protein K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D YPO3024 nanA; probable N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D YPO3864 nfrC; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D YPO3863 b3787; putative UDP-glucose/GDP-mannose dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D YPO2420 probable formyl transferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D YPO2422 conserved hypothteical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YPO2421 pmrF; probable glycosyl transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D YPO2419 conserved hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D YPO1608 glcA; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YPO2977 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YPO2686 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPO1539 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPO1540 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPO2174 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YPO1137 galA; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YPO1138 galB; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D YPO1139 galD; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YPO1758 gptB; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YPO1757 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D YPO1756 gptB; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D YPO3718 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YPO2263 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YPO3097 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YPO2479 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YPO3099 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YPO3115 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YPO3113 ddhC; putative CDP-4-keto-6-deoxy-D-glucose-3-dehydratase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D YPO3116 ascD; cdp-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D YPO3112 prt; paratose synthase K12453 rfbS; CDP-paratose synthetase [EC:1.1.1.342]
D YPO3940 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ype00620]
D YPO0253 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YPO2334 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D YPO3419 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YPO3418 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YPO3917 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3417 lpd; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO1383 pfl; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YPO2180 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YPO1502 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPO2566 ack; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YPO2567 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YPO2064 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPO2393 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPO1060 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D YPO3659 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YPO3658 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YPO2768 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D YPO1446 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D YPO1569 lctD; L-lactate dehydrogenase K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D YPO1358 poxB; pyruvate dehydrogenase [cytochrome] K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D YPO2329 hslI; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D YPO1177 dld; D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D YPO2381 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D YPO1079 gloB; putative hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D YPO1409 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D YPO4078 putative D-isomer specific 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YPO1511 maeA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D YPO3034 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D YPO3516 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YPO3335 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D YPO0360 b4154; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPO0359 b4153; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPO0358 b4152; fumarate reductase hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D YPO0357 b4151; fumarate reductase hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D YPO3929 glu; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D YPO0138 pck; phosphoenolpyruvate carboxykinase [ATP] K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D YPO2409 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D YPO3726 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D YPO0533 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ype00630]
D YPO3725 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D YPO0253 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YPO3726 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D YPO3516 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YPO1108 gltA; citrate synthase GltA K01647 CS; citrate synthase [EC:2.3.3.1]
D YPO2221 acn; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D YPO3415 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D YPO1207 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D YPO4078 putative D-isomer specific 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YPO0156 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D YPO0024 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YPO2907 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YPO0905 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YPO0907 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YPO3917 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3417 lpd; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO0906 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D YPO3648 putative 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D YPO3980 glxK; putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YPO2496 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D YPO2067 eda; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D YPO4057 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D YPO4056 fdoI; formate dehydrogenase, cytochrome b556 protein K00127 fdoI; formate dehydrogenase subunit gamma
D YPO1971 hutG; putative N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:ype00640]
D YPO0253 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YPO2566 ack; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YPO2567 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YPO3917 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3417 lpd; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO1383 pfl; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YPO3663 yhdH; probable zinc-binding dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D YPO3766 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPO2747 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPO1060 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D YPO3659 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YPO3658 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YPO2768 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D YPO2844 gabT; putative aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YPO1115 b0728; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YPO1116 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YPO2577 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YPO3415 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D YPO1441 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D YPO0678 putative iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:ype00650]
D YPO3766 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPO2747 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPO4104 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D YPO2180 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YPO2496 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D YPO1111 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPO1112 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPO1109 cybA; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YPO1110 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YPO0360 b4154; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPO0359 b4153; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPO0358 b4152; fumarate reductase hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D YPO0357 b4151; fumarate reductase hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D YPO2844 gabT; putative aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YPO1290 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YPO1383 pfl; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D YPO2334 nifJ; putative pyruvate-flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D YPO1457 putative hydroxymethylglutaryl-coenzyme A synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D YPO0539 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPO2293 ilvB; putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPO3901 ilvG; acetolactate synthase isozyme II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPO0540 ilvH; acetolactate synthase isozyme III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPO2294 ilvN; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPO3900 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ype00660]
D YPO0539 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPO2293 ilvB; putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPO3901 ilvG; acetolactate synthase isozyme II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPO0540 ilvH; acetolactate synthase isozyme III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPO2294 ilvN; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPO3900 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D YPO1926 putative 4-hydroxybutyrate coenzyme A transferase K18288 ict-Y; itaconate CoA-transferase [EC:2.8.3.-]
D YPO1115 b0728; succinyl-CoA synthetase beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D YPO1116 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D YPO1927 putative transcription regulatory protein K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D YPO1928 putative citrate lyase beta chain K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D YPO0082 possible transferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D YPO0531 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D YPO0530 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D YPO0532 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:ype00562]
D YPO2899 suhB; putative inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YPO1648 probable histidine acid phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D YPO2586 conserved hypothetical protein K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D YPO2578 putative thiamine pyrophosphate-dependent protein K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D YPO2587 conserved hypothetical protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D YPO2585 putative carbohydrate kinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D YPO2577 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YPO0085 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ype00190]
D YPO2555 nuoA; NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D YPO2554 nuoB; NADH dehydrogenase I chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D YPO2553 nuoD; NADH dehydrogenase I chain C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D YPO2552 nuoE; NADH dehydrogenase I chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D YPO2551 nuoF; NADH dehydrogenase I chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D YPO2550 nuoG; NADH dehydrogenase I chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D YPO2549 nuoH; NADH dehydrogenase I chain H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D YPO2548 nuoI; NADH Dehydrogenase I chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D YPO2547 nuoJ; NADH dehydrogenase I chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D YPO2546 nuoK; NADH dehydrogenase i chain k K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D YPO2545 nuoL; NADH dehydrogenase I chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D YPO2544 nuoM; NADH dehydrogenase I chain M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D YPO2543 nuoN; NADH dehydrogenase I chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D YPO1617 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D YPO1111 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPO1112 sdhB; succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPO1109 cybA; succinate dehydrogenase cytochrome b-556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D YPO1110 sdhD; succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D YPO0360 b4154; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPO0359 b4153; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPO0358 b4152; fumarate reductase hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D YPO0357 b4151; fumarate reductase hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D YPO3168 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YPO3167 cyoD; cytochrome O ubiquinol oxidase subunit CyoD K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D YPO3166 cyoC; cytochrome O ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D YPO3165 cyoB; cytochrome O ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D YPO3164 cyoA; cytochrome O ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D YPO1117 cydA; cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YPO1118 cydB; cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YPO4123 atpA; ATP synthase alpha subunit protein K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D YPO4121 atpD; ATP synthase beta subunit protein K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D YPO4122 atpG; ATP synthase gamma subunit protein K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D YPO4124 atpH; ATP synthase delta subunit protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D YPO4120 atpC; ATP synthase epsilon subunit protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D YPO4127 atpB; ATP synthase subunit B protein K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YPO4125 atpF; ATP synthase subunit B protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D YPO4126 atpE; ATP synthase subunit C protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D YPO3521 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D YPO2836 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:ype00680]
D YPO1502 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPO1501 putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D YPO4057 fdoH; formate dehydrogenase-O, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D YPO4056 fdoI; formate dehydrogenase, cytochrome b556 protein K00127 fdoI; formate dehydrogenase subunit gamma
D YPO0344 b4079; formate dehydrogenase H K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D YPO2907 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YPO3376 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YPO3929 glu; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D YPO3516 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YPO3960 putative class-II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPO0920 fba; fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D YPO3520 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YPO0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPO2460 conserved hypothetical protein K10713 fae; 5,6,7,8-tetrahydromethanopterin hydro-lyase [EC:4.2.1.147]
D YPO2566 ack; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D YPO2567 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YPO0253 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YPO2409 pps; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D YPO1133 gpm; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPO0455 gpmB; putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPO0064 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D YPO1288 putative D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPO0914 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPO1389 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YPO0442 b4388; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:ype00910]
D YPO3038 napA; periplasmic nitrate reductase precursor K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D YPO3037 napB; cytochrome C-type protein NapB precursor K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D YPO0161 nirB; nitrite reductase K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D YPO0160 nirD; nitrite reductase [NAD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D YPO1360 hcp; putative prismane protein homologue K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D YPO3971 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D YPO0024 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YPO3557 aspB; glutamate synthase [NADPH] large chain precursor K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YPO3558 aspB; glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D YPO0819 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D YPO3407 yadF; putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ype00920]
D YPO3015 cysP; thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D YPO0079 sbp1; exported sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D YPO3014 cysT; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D YPO3013 cysW; sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D YPO3012 cysA; sulfate transport ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D YPO0182 ssiA; putative taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein
D YPO0184 ssiC; putative taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D YPO0183 ssiB; putative taurine transport ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D YPO0185 ssiD; putative taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D YPO3624 ssuA; putative aliphatic sulfonates binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D YPO3626 ssuC; putative aliphatic sulfonates transport permease protein K15554 ssuC; sulfonate transport system permease protein
D YPO3627 ssuB; putative aliphatic sulfonates transport ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YPO3625 ssuD; alkanesulfonate monooxygenase K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D YPO3623 ssuE; putative NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D YPO3365 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YPO3366 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YPO3364 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D YPO3529 amtA; inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D YPO3372 cysJ; sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D YPO3371 cysI; sulfite reductase [NADPH] hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D YPO1194 putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YPO0122 conserved hypothetical protein K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D YPO0070 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D YPO2992 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YPO3147 putative Pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YPO4018 cysM; pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YPO3727 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D YPO3325 dmsA; anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D YPO2965 dmsA; putative dimethyl sulfoxide reductase chain A protein K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D YPO3324 dmsB; anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D YPO2966 dmsB; putative dimethyl sulfoxide reductase chain B protein K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D YPO3323 dmsC; anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D YPO2967 dmsC; putative dimethyl sulfoxide reductase chain C protein K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ype00061]
D YPO1060 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D YPO3659 accB; biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D YPO3658 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D YPO2768 accD; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D YPO1600 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D YPO1463 putative acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YPO1598 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YPO1597 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YPO1455 putative beta-ketoacyl-[acyl-carrier-protein] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YPO2757 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YPO1601 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YPO1456 putative beta-ketoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPO1599 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPO1430 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D YPO1454 putative (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YPO1055 fabZ; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase (EC 4.2.1.-) K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YPO4104 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D YPO0537 putative AMP-binding enzyme-family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPO2074 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ype00071]
D YPO3767 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPO2746 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPO3766 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPO2747 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPO3244 yafH; probable acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D YPO0537 putative AMP-binding enzyme-family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPO2074 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPO0793 aas; Aas bifunctional protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D YPO1502 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPO2180 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ype00561]
D YPO3980 glxK; putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YPO3350 dhaK; putative dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D YPO3349 conserved hypothetical protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D YPO3312 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YPO0312 b4041; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D YPO1596 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D YPO0647 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D YPO0672 parF; putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YPO0313 b4042; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D YPO1581 rafA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:ype00564]
D YPO0068 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D YPO3826 glpA; anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D YPO3937 glpD; aerobic glycerol-3-phosphate dehydrogenase (partial) K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D YPO3825 glpB; putative anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D YPO3824 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D YPO0312 b4041; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D YPO0647 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D YPO0672 parF; putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D YPO0313 b4042; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D YPO3834 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D YPO3830 pldB; putative lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D YPO3792 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D YPO3827 glpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D YPO0793 aas; Aas bifunctional protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D YPO3986 cdh; CDP-diacylglycerol pyrophosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D YPO1050 cds; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D YPO2816 ynbB; putative phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D YPO3273 pss; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D YPO0364 psd; phosphatidylserine decarboxylase proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D YPO1867 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D YPO3179 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D YPO2223 pgpB; phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D YPO2924 yfhB; putative membrane protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D YPO2188 cls; cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:ype00565]
D YPO3834 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:ype00600]
D YPO1983 putative glycosyl transferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D YPO1654 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D YPO1581 rafA; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
D YPO3834 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D YPO3834 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:ype00592]
D YPO3834 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D YPO3767 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPO2746 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ype01040]
D YPO3080 apeA; putative acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D YPO3141 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D YPO2195 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ype00230]
D YPO0664 putative MutT-family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D YPO0144 putative hydrolase K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D YPO0439 b4383; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D YPO2686 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPO2013 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D YPO2772 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D YPO3729 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D YPO2829 purN; putative phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D YPO1775 purT; phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D YPO2921 purI; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D YPO2828 purI; putative phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D YPO3077 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit PurK K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D YPO3076 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D YPO3059 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D YPO1636 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D YPO3728 purH; bifunctional purine biosynthesis protein PurH [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YPO4019 putative phosphoribosyl transferase protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YPO3123 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YPO3358 surE; stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YPO2624 nagD; putative N-acetylglucosamine metabolism protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YPO0141 conserved hypothetical protein K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D YPO3095 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D YPO1171 pndA; xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YPO0440 b4384; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YPO3213 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D YPO3276 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D YPO3408 b0125; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D YPO2871 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D YPO2883 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YPO0454 conserved hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D YPO0945 conserved hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D YPO3225 gpp; xanthine-guanine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D YPO2870 guaA; putative GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D YPO3428 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D YPO0040 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D YPO1214 dnaF; ribonucleoside-diphosphate reductase 1 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YPO2649 nrdE; ribonucleoside-diphosphate reductase 2 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YPO1213 ftsB; ribonucleoside-diphosphate reductase 1 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YPO2648 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YPO3454 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D YPO3383 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D YPO2559 conserved hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D YPO0038 spoT; guanosine-3',5'-bisbis(diphosphate) 3'-pyrophosphydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D YPO2837 ppx; putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D YPO3380 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D YPO3848 cya; adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D YPO1178 cyaB; adenylate cyclase 2 K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D YPO2696 putative 3',5'-cyclic-nucleotide phosphodiesterase K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17]
D YPO0378 adeK; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D YPO2288 amn; putative AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D YPO1033 conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D YPO3530 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D YPO3118 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D YPO3378 conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YPO0666 icc; Icc protein homologue K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D YPO0490 apaH; bis(5'nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D YPO3364 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D YPO3365 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YPO3366 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YPO3249 putative amino acid hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D YPO2667 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YPO2666 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YPO2665 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D YPO3261 probable amidase K22601 hpxY; oxamate carbamoyltransferase [EC:2.1.3.5]
C 00240 Pyrimidine metabolism [PATH:ype00240]
D YPO0482 b0033; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D YPO0481 b0032; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D YPO3588 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D YPO3589 pyrI; aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D YPO1587 b1062; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D YPO1415 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D YPO0045 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D YPO2227 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D YPO1046 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D YPO2883 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YPO3378 conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YPO3668 yhdE; putative inhibitor of septum formation K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D YPO0586 conserved hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D YPO3377 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D YPO1391 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D YPO2167 nudG; putative pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D YPO1524 b2066; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D YPO3358 surE; stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YPO2624 nagD; putative N-acetylglucosamine metabolism protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YPO2295 haloacid dehalogenase-like hydrolase family protein K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D YPO3786 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D YPO3213 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D YPO2827 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D YPO3530 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D YPO1033 conserved hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D YPO1512 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D YPO0162 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D YPO3454 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D YPO1525 b2065; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D YPO1214 dnaF; ribonucleoside-diphosphate reductase 1 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YPO2649 nrdE; ribonucleoside-diphosphate reductase 2 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YPO1213 ftsB; ribonucleoside-diphosphate reductase 1 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YPO2648 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YPO2559 conserved hypothetical protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D YPO1605 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D YPO0047 dnaS; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D YPO2176 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D YPO0783 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ype00250]
D YPO1410 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPO2710 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D YPO1386 ansB; putative L-asparaginase II precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YPO2161 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YPO0003 asnA; aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D YPO2623 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YPO2558 aat; probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YPO0348 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D YPO1570 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YPO3924 argH; putative argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YPO0378 adeK; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D YPO1636 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D YPO3588 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D YPO3589 pyrI; aspartate carbamoyltransferase regulatory chain K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D YPO2844 gabT; putative aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YPO1290 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YPO3557 aspB; glutamate synthase [NADPH] large chain precursor K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YPO3558 aspB; glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D YPO3971 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D YPO1851 poaA; bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D YPO0024 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YPO0482 b0033; carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D YPO0481 b0032; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D YPO0949 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPO1939 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPO4118 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YPO2772 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ype00260]
D YPO3719 apk; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YPO0459 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YPO0116 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YPO3949 asd; aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YPO0460 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D YPO0461 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D YPO1357 ltaA; L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D YPO2907 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YPO4078 putative D-isomer specific 2-hydroxyacid dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D YPO3980 glxK; putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D YPO1133 gpm; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPO0455 gpmB; putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPO0064 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D YPO1288 putative D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPO0914 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPO1389 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YPO0442 b4388; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D YPO0059 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D YPO0060 tdh; threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D YPO0905 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YPO0907 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YPO3917 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3417 lpd; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO0906 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D YPO3273 pss; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D YPO1165 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D YPO1166 betB; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D YPO1771 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YPO3896 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YPO4089 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YPO2758 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YPO1687 putative alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D YPO2203 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D YPO2204 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D YPO1529 putative decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:ype00270]
D YPO0070 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D YPO2992 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YPO3147 putative Pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YPO4018 cysM; pyridoxal-phosphate dependent protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D YPO0681 metC; putative cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPO0278 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPO3006 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPO3722 metH; 5-Methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YPO3788 metE; 5-methyltetrahydropteroyltriglutamate--homocyste i ne methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D YPO0931 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D YPO3412 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D YPO3411 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YPO2456 ypeI; N-acylhomoserine lactone synthase YpeI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YPO0984 yspI; N-acylhomoserine lactone synthase YspI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YPO3384 mtn; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D YPO3276 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D YPO0322 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YPO1703 conserved hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D YPO3300 luxS; autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D YPO3719 apk; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YPO0459 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YPO0116 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YPO3949 asd; aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YPO3727 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D YPO3899 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YPO3301 b2688; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D YPO0935 gsh-II; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D YPO1410 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPO1194 putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YPO2758 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YPO1687 putative alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D YPO1845 YedO; putative deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D YPO3516 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D YPO1771 sdaA; L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D YPO3011 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D YPO1288 putative D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPO0914 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPO1389 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ype00280]
D YPO3899 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YPO3917 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3417 lpd; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3766 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPO2747 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPO3767 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPO2746 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPO2577 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D YPO1457 putative hydroxymethylglutaryl-coenzyme A synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ype00290]
D YPO3896 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YPO4089 pyridoxal-phosphate dependent enzyme K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D YPO0531 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D YPO0530 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D YPO0532 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D YPO0539 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPO2293 ilvB; putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPO3901 ilvG; acetolactate synthase isozyme II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPO0540 ilvH; acetolactate synthase isozyme III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPO2294 ilvN; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPO3900 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D YPO3888 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D YPO3897 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D YPO3899 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YPO4082 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D YPO2558 aat; probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YPO0533 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ype00300]
D YPO3719 apk; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YPO0459 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YPO0116 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YPO3949 asd; aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YPO3062 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YPO0480 b0031; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D YPO1041 dapD; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D YPO3053 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D YPO3845 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D YPO0796 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YPO1936 putative aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D YPO0550 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diam i nopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YPO0551 mra; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin o pimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ype00310]
D YPO1114 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YPO3917 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3417 lpd; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3766 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPO2747 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPO2758 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YPO1687 putative alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D YPO1290 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D YPO1397 conserved hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D YPO2407 conserved hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:ype00220]
D YPO3446 argI; ornithine carbamoyltransferase chain I K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D YPO1570 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YPO3924 argH; putative argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YPO2667 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YPO2666 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YPO2665 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D YPO0949 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPO1939 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPO0024 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YPO3971 gdhA; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D YPO1410 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPO2558 aat; probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YPO1022 argA; amino-acid acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D YPO3925 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D YPO3927 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D YPO3928 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:ype00330]
D YPO0162 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D YPO1201 putative amino acid decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D YPO0929 speA; biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D YPO0939 conserved hypothetical protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D YPO0938 putative carbon-nitrogen hydrolase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D YPO0960 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YPO3411 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D YPO3412 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D YPO2830 speG; spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D YPO1963 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D YPO1965 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D YPO1962 argM; succinylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D YPO1964 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D YPO1966 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D YPO0942 proC; putative pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D YPO1851 poaA; bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D YPO3222 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D YPO3221 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D YPO1781 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YPO1410 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ype00340]
D YPO1549 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D YPO1542 hisI; histidine biosynthesis bifunctional protein [includes: phosphoribosyl-amp cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D YPO1544 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D YPO1545 hisH; amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D YPO1543 hisF; histidine biosynthesic protein (cyclase) K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D YPO1546 hisB; histidinol-phosphatase and imidazoleglycerol-phosphate dehydratase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D YPO1547 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YPO1548 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D YPO4016 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D YPO4017 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D YPO1972 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D YPO1974 putative chlorohydrolase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D YPO1971 hutG; putative N-formylglutamate amidohydrolase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00350 Tyrosine metabolism [PATH:ype00350]
D YPO1410 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPO1547 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YPO0322 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YPO1193 putative pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YPO1502 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPO2180 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D YPO1769 hpaB; 4-hydroxyphenylacetate 3-monooxygenase K00483 hpaB; 4-hydroxyphenylacetate 3-monooxygenase [EC:1.14.14.9]
D YPO1770 hpaC; 4-hydroxyphenylacetate 3-monooxygenase coupling protein K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D YPO1764 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D YPO1763 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D YPO1765 hpaF; 5-carboxymethyl-2-hydroxymuconate delta-isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D YPO1766 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D YPO1767 hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D YPO1290 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ype00360]
D YPO1193 putative pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YPO1410 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPO1547 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YPO0322 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YPO2147 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D YPO3319 katY; catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:ype00380]
D YPO1114 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YPO3917 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3417 lpd; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3766 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPO2747 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPO1193 putative pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YPO1207 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D YPO3319 katY; catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ype00400]
D YPO2411 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YPO3286 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase,tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YPO0152 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D YPO3660 aroQ; putative class II dehydroquinase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D YPO0246 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D YPO0151 aroK; shikimate kinase I K00891 aroK; shikimate kinase [EC:2.7.1.71]
D YPO3215 aroL; shikimate kinase II K00891 aroK; shikimate kinase [EC:2.7.1.71]
D YPO1390 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D YPO2751 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D YPO2208 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YPO2207 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D YPO2206 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D YPO2205 trpC; tryptophan biosynthesis protein TrpCF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D YPO2203 trpA; tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D YPO2204 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D YPO3285 tyrA; T-protein [includes: chorismate mutase and prephenate dehydrogenase] K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D YPO1353 putative chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D YPO3343 probable extracellular solute-binding protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D YPO1410 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPO1547 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YPO0322 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ype00410]
D YPO3403 panD; aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D YPO2844 gabT; putative aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YPO3402 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D YPO3766 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPO2747 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPO2577 putative aldehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:ype00430]
D YPO0185 ssiD; putative taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D YPO2567 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D YPO2566 ack; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:ype00440]
D YPO3459 phnI; PhnI protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D YPO3457 phnG; PhnG protein K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D YPO3458 phnH; PhnH protein K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D YPO3462 phnL; phosphonates transport ATP-binding protein K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D YPO3463 phnM; PhnM protein K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D YPO3460 phnJ; PhnJ protein K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D YPO3465 phnP; PhnP protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:ype00450]
D YPO0681 metC; putative cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPO0278 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPO3006 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPO3722 metH; 5-Methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YPO3788 metE; 5-methyltetrahydropteroyltriglutamate--homocyste i ne methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D YPO2400 putative selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D YPO1374 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D YPO3365 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YPO3366 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YPO2164 fdhB; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D YPO4054 fdhA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D YPO1522 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ype00460]
D YPO0616 putative glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YPO2803 bglB; putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YPO1386 ansB; putative L-asparaginase II precursor K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YPO2161 ansA; L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D YPO0003 asnA; aspartate-ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D YPO2907 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ype00470]
D YPO0321 alr; alanine racemase (biosynthetic) K01775 alr; alanine racemase [EC:5.1.1.1]
D YPO0557 ddl; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YPO2758 putative aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D YPO1687 putative alanine racemase K25317 alr; amino-acid racemase [EC:5.1.1.10]
D YPO0949 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPO1939 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPO3909 dga; putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D YPO0553 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YPO2341 putative mandelate racemase / muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D YPO1845 YedO; putative deaminase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D YPO3845 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D YPO0796 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D YPO1346 conserved hypothetical protein K23120 cntL; histidine 2-aminobutanoyltransferase [EC:2.5.1.152 2.5.1.-]
D YPO1347 putative exported protein K23122 cntM; staphylopine/pseudopaline/yersinopine synthase [EC:1.5.1.52 1.5.1.-]
D YPO2147 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:ype00480]
D YPO2700 conserved hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D YPO2699 conserved hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D YPO3301 b2688; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D YPO0935 gsh-II; glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D YPO3441 carP; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D YPO2889 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D YPO1414 pepN; putative aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D YPO3230 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D YPO2367 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YPO1314 putative glutathione S-transferase-family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YPO3977 gor; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D YPO1641 icd; isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D YPO1541 gnd; 6-phosphogluconate dehydrogenase,decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D YPO2066 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YPO2424 btuE; putative vitamin B12 transport protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D YPO3916 putative peroxiredoxin/glutaredoxin family protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D YPO0960 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D YPO3411 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ype00511]
D YPO1654 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00540 Lipopolysaccharide biosynthesis [PATH:ype00540]
D YPO1056 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosa m ine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D YPO0561 asmB; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D YPO1054 firA; UDP-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D YPO3075 conserved hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D YPO1057 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D YPO1396 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D YPO3577 conserved hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D YPO2021 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D YPO3578 conserved hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D YPO1400 kdsB; putative 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D YPO0055 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D YPO2063 msbB; lipid A biosynthesis acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D YPO1276 putative membrane protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D YPO2377 putative membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D YPO4013 yhjW; putative membrane protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D YPO1744 putative exported protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D YPO2418 dolichyl-phosphate-mannose-protein mannosyltransferase-family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D YPO3632 ddg; putative membrane protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D YPO3243 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D YPO0654 rfaE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D YPO1074 conserved hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D YPO0058 htrM; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D YPO0056 rfa-2; lipopolysaccharide heptosyltransferase-1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D YPO0057 rfaF; ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D YPO0416 putative lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis [PATH:ype00542]
D YPO3866 b3784; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ype00541]
D YPO1539 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPO1540 galF; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D YPO1139 galD; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D YPO2174 putative nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D YPO3861 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YPO3862 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D YPO3859 b3791; putative lipopolysaccharide biosynthesis protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D YPO3860 b3790; putative lipopolysaccharide biosynthesis protein K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D YPO3115 ddhA; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D YPO3113 ddhC; putative CDP-4-keto-6-deoxy-D-glucose-3-dehydratase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D YPO3116 ascD; cdp-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D YPO3112 prt; paratose synthase K12453 rfbS; CDP-paratose synthetase [EC:1.1.1.342]
D YPO2263 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D YPO3097 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YPO2479 manB; phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D YPO3099 manC; mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D YPO4119 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D YPO3864 nfrC; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D YPO3863 b3787; putative UDP-glucose/GDP-mannose dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
C 00550 Peptidoglycan biosynthesis [PATH:ype00550]
D YPO3569 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YPO3760 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YPO0556 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D YPO0553 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YPO0550 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diam i nopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YPO0557 ddl; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YPO0551 mra; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin o pimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D YPO1049 rth; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D YPO0649 bacA; putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YPO1324 putative permease K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YPO0552 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YPO0555 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentape p tide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YPO3552 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YPO0145 b3396; penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YPO3393 b0149; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D YPO2604 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D YPO0549 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YPO1320 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YPO2601 dacA; putative penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YPO3506 dacB; penicillin-binding protein 4 precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:ype00552]
D YPO0649 bacA; putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YPO1324 putative permease K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YPO3866 b3784; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ype00543]
D YPO3866 b3784; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D YPO3855 rffM; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D YPO3857 conserved hypothetical protein K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D YPO1953 hmsR; haemin storage system, HmsR protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D YPO1954 hmsS; haemin storage system, HmsS protein K11937 pgaD; biofilm PGA synthesis protein PgaD
D YPO0070 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ype00730]
D YPO3739 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D YPO2859 thiD; putative phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D YPO3741 thiF; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D YPO2896 iscS; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPO2138 putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPO3173 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YPO3743 thiH; thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D YPO3177 b0420; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D YPO3742 thiG; thiamine biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D YPO3740 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D YPO3180 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D YPO0365 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D YPO2298 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YPO1614 conserved hypothetical protein K07251 thiK; thiamine kinase [EC:2.7.1.89]
D YPO3118 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ype00740]
D YPO2222 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YPO3183 ribD; riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D YPO3842 putative haloacid dehalogenase-like hydrolase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D YPO0658 htrP; 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D YPO3182 ribE; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D YPO2391 ribC; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D YPO0474 b0025; riboflavin biosynthesis protein (includes: riboflavin kinase and FMN adenyltransferase) K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D YPO1648 probable histidine acid phosphatase K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D YPO1770 hpaC; 4-hydroxyphenylacetate 3-monooxygenase coupling protein K00484 hpaC; flavin reductase (NADH) [EC:1.5.1.36]
D YPO3768 fadI; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D YPO3623 ssuE; putative NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D YPO0664 putative MutT-family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D YPO1639 conserved hypothetical protein K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D YPO2773 ubiX; probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:ype00750]
D YPO2370 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D YPO2368 pdxY; pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D YPO0922 epd; D-erythrose 4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D YPO2763 pdxB; putative D-isomer specific 2-hydroxyacid dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D YPO1389 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YPO0493 pdxA; pyridoxal phosphate biosynthetic protein K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D YPO2930 pdxJ; pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D YPO0461 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ype00760]
D YPO2710 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D YPO1127 nadA; quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D YPO3424 nadC; nicotinate-nucleotide pyrophosphorylase [carboxylating] K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D YPO1413 pncB; putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D YPO1171 pndA; xanthosine phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YPO0440 b4384; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D YPO0444 b4390; transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D YPO3358 surE; stationary-phase survival protein K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D YPO2624 nagD; putative N-acetylglucosamine metabolism protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D YPO2607 nadD; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D YPO3378 conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YPO3736 conserved hypothetical protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D YPO2912 adgA; putative glutamine-dependent NAD K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D YPO3308 putative competence-damaged protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D YPO2160 nam; putative pyrazinamidase/nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D YPO1630 cobB; putative Sir2 family protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D YPO1106 conserved hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D YPO3914 sth; soluble pyridine nucleotide transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D YPO2303 pntA; NAD(P) transhydrogenase alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D YPO2302 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D YPO1290 putative aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ype00770]
D YPO0539 ilvI; acetolactate synthase isozyme III large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPO2293 ilvB; putative acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPO3901 ilvG; acetolactate synthase isozyme II large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D YPO0540 ilvH; acetolactate synthase isozyme III small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPO2294 ilvN; putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D YPO3900 ilvM; acetolactate synthase isozyme II small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D YPO3888 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D YPO3897 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D YPO3401 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D YPO3171 apbA; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D YPO3402 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D YPO3758 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D YPO0048 dfp; DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D YPO3378 conserved hypothetical protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D YPO0053 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D YPO3430 conserved hypothetical protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D YPO2929 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D YPO3193 conserved hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D YPO3899 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YPO3403 panD; aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:ype00780]
D YPO1153 bioC; biotin synthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D YPO1455 putative beta-ketoacyl-[acyl-carrier-protein] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YPO2757 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YPO1601 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YPO1456 putative beta-ketoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPO1599 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPO1454 putative (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YPO1055 fabZ; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase (EC 4.2.1.-) K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YPO0129 bioH; putative biotin biosynthesis protein K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D YPO1152 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D YPO1150 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D YPO1154 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D YPO2269 bioD; putative dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D YPO1151 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D YPO3759 bioR; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D YPO0794 bisC; putative biotin sulfoxide reductas2 K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
C 00785 Lipoic acid metabolism [PATH:ype00785]
D YPO2599 lipB; lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D YPO2598 lip; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D YPO2414 lplA; putative lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D YPO3917 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3417 lpd; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3419 aceE; pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D YPO3418 aceF; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D YPO1113 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D YPO1114 sucB; dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D YPO0905 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D YPO0907 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YPO0906 gcsH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ype00790]
D YPO1505 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D YPO2298 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YPO2054 ntpA; putative dATP pyrophosphohydrolase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D YPO0648 folB; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D YPO3400 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin e pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D YPO3501 dhpS; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D YPO0486 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D YPO2769 dedC; putative FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D YPO2222 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YPO0169 pabA; para-aminobenzoate synthase glutamine amidotransferase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D YPO1773 pabB; para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D YPO1603 pabC; 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D YPO3373 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase family protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D YPO3374 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D YPO3150 conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D YPO1034 conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D YPO1159 bisA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D YPO1160 chlA3; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D YPO1162 chlA5; molybdopterin [mpt] converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D YPO0464 chlG; molybdopterin biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D YPO1495 bisB; molybdopterin biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D YPO0013 chlB; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:ype00670]
D YPO0486 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D YPO2824 ads; putative FolD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D YPO2907 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D YPO2829 purN; putative phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D YPO3728 purH; bifunctional purine biosynthesis protein PurH [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YPO0241 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D YPO0907 gcvT; aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D YPO3722 metH; 5-Methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D YPO0783 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D YPO0117 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D YPO0287 putative methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D YPO0913 putative 5-formyltetrahydrofolate cyclo-ligase-family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ype00860]
D YPO2984 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YPO2016 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D YPO3389 gsa; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D YPO3771 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D YPO3849 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D YPO3850 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D YPO3734 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D YPO3032 hemF; coproporphyrinogen III oxidase, aerobic HemF K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D YPO0021 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D YPO3761 hemG; protoporphyrinogen oxidase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D YPO3117 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D YPO3851 hemX; putative uroporphyrin-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D YPO3367 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D YPO0158 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D YPO3168 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YPMT1.88 YPMT1.88; putative porphyrin biosynthetic protein K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D YPO2214 btuR; cob(I)alamin adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D YPO0206 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ype00130]
D YPO0310 ubiC; putative chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D YPO0311 b4040; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D YPO3769 conserved hypothetical protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D YPO2773 ubiX; probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D YPO0908 visC; putative monooxygenase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D YPO1215 pufX; 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D YPO0909 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D YPO3781 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D YPO2621 ubiF; putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D YPO2528 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D YPO2527 menD; menaquinone biosynthesis protein K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D YPO2526 conserved hypothetical protein K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D YPO2524 menC; putative O-succinylbenzoate-CoA synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D YPO2523 menE; putative O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D YPO2525 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D YPO2406 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D YPO0104 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D YPO1857 wrbA; trp repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D YPO1645 conserved hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ype00900]
D YPO3177 b0420; 1-deoxy-D-xylulose 5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D YPO1048 b0173; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D YPO3361 b2747; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D YPO2014 ipk; putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D YPO3360 b2746; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D YPO2879 aarC; putative acetyltransferase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D YPO0477 b0029; LytB protein K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D YPO1457 putative hydroxymethylglutaryl-coenzyme A synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D YPO2773 ubiX; probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D YPO3176 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D YPO3513 cel; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D YPO1049 rth; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:ype00907]
D YPO3766 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPO2747 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPO3767 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPO2746 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D YPO0926 tkt; transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YPO3313 C-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D YPO3314 putative N-terminal region of transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ype00523]
D YPO3861 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YPO3862 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:ype01053]
D YPO2528 menF; menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D YPO1580 putative phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D YPO1916 irp9; putative salicylate synthetase K04781 mbtI; salicylate synthetase [EC:5.4.4.2 4.2.99.21]
D YPO0776 putative siderophore biosysnthesis protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D YPO0774 conserved hypothetical protein K12241 pchG; pyochelin biosynthesis protein PchG
D YPO1907 irp5; yersiniabactin siderophore biosynthetic protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
D YPO1911 irp2; yersiniabactin biosynthetic protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D YPO1909 irp3; yersiniabactin biosynthetic protein YbtU K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D YPO1910 irp1; yersiniabactin biosynthetic protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
C 01055 Biosynthesis of vancomycin group antibiotics
D YPO3862 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:ype00946]
D YPO0616 putative glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YPO2803 bglB; putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:ype00332]
D YPO3222 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D YPO3221 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:ype00261]
D YPO3365 cysN; sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D YPO3366 cysD; sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D YPO3719 apk; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D YPO0459 thrA; bifunctional aspartokinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D YPO0116 metL; bifunctional aspartokinase/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D YPO3949 asd; aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D YPO3062 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D YPO0480 b0031; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ype00521]
D YPO2977 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D YPO2686 pgm; phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D YPO2899 suhB; putative inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D YPO3861 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YPO3862 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D YPO2977 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:ype00525]
D YPO3861 rffH; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D YPO3862 rffG; dTDP-D-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ype00401]
D YPO3285 tyrA; T-protein [includes: chorismate mutase and prephenate dehydrogenase] K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D YPO1410 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPO1547 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YPO0322 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D YPO2208 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YPO2207 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D YPO1463 putative acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YPO1598 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YPO1456 putative beta-ketoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPO1599 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D YPO1600 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:ype00999]
D YPO0931 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D YPO0246 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D YPO0616 putative glycosyl hydrolase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D YPO2803 bglB; putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:ype00997]
D YPO0993 iucD; putative siderophore biosynthesis protein IucD K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59]
D YPO0991 iucB; putative siderophore biosynthesis protein IucB K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
D YPO0992 iucC; putative siderophore biosynthesis protein IucC K03895 iucC; aerobactin synthase [EC:6.3.2.39]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ype00362]
D YPO3767 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPO2746 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPO3989 putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D YPO1999 putative decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D YPO3649 putative gamma carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D YPO0083 hypothetical protein K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83]
D YPO0082 possible transferase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D YPO2747 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D YPO3766 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00627 Aminobenzoate degradation [PATH:ype00627]
D YPO1446 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D YPO2773 ubiX; probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:ype00364]
D YPO3787 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:ype00625]
D YPO1502 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPO2180 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ype00361]
D YPO3787 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:ype00623]
D YPO3787 putative carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D YPO3989 putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:ype00633]
D YPO2379 NADH:flavin oxidoreductase / NADH oxidase family protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D YPO3767 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D YPO2746 putative 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
D YPO2667 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D YPO2666 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D YPO2665 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:ype00930]
D YPO3766 fadB; fatty acid oxidation complex alpha subunit K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D YPO2747 faoA; putative fatty oxidation complex alpha subunit,enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D YPO3989 putative tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:ype00626]
D YPO1502 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D YPO2180 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ype03020]
D YPO3747 groN; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YPO3746 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YPO0234 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YPO0039 rpoZ; DNA-directed RNA polymerase, omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ype03010]
D YPO1392 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D YPO1044 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D YPO0216 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D YPO0233 ramA; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D YPO0226 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D YPO3539 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D YPO0201 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D YPO0223 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D YPO3562 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D YPO0209 nusE; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D YPO0232 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D YPO0200 rpsl; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D YPO0231 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D YPO0222a rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D YPO3493 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D YPO3295 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D YPO0219 neaA; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D YPO3537 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D YPO0214 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D YPO0472 b0023; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D YPO0645 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D YPO3750 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D YPO0213 rplB; 50S ribosomal protein l2 K02886 RP-L2; large subunit ribosomal protein L2
D YPO0210 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D YPO0211 eryA; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D YPO0222 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D YPO0224 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D YPO3748 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D YPO3536 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D YPO3749 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D YPO3751 relC; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D YPO3563 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D YPO0220 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D YPO0228 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D YPO0217 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D YPO0235 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D YPO0225 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D YPO3292 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D YPO2430 pdzA; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D YPO3512 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D YPO0215 eryB; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D YPO0212 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D YPO0221 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D YPO1264 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D YPO3511 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D YPO0050 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D YPO0218 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D YPO0227 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D YPO0111 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D YPO3134 ykgM; putative ribosomal protein K02909 RP-L31; large subunit ribosomal protein L31
D YPO1595 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D YPO0051 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D YPO4100 rimA; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D YPO2431 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D YPO0230 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D YPO3135 putative ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D 16S_rRNA-4 16S_rRNA; match to 16S_rRNA 1..1489 (EMBL:YPE16SA) K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-6 16S_rRNA; match to 16S_rRNA 1..1489 (EMBL:YPE16SA) K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA-6 23S_rRNA; match to 23S_rRNA 1..2906 (Y. enterocolitica 23S EMBL:U77925) K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-5 23S_rRNA; match to 23S_rRNA 1..2906 (Y. enterocolitica 23S EMBL:U77925) K01980 23SrRNA; 23S ribosomal RNA
D 5S_rRNA-4 5S_rRNA; partial 5SrRNA lacking the first 100 bases. K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ype00970]
D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-5 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-3 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-4 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-3 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-4 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-5 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-6 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-2 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-4 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-2 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-4 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-5 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Sec tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D YPO2984 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YPO2630 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D YPO3305 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YPO2053 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YPO1412 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D YPO4072 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D YPO4071 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D YPO2433 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YPO1379 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YPO4054 fdhA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D YPO3073 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D YPO1522 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YPO0241 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D YPO3443 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YPO2610 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YPO0475 b0026; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YPO0888 asuD; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YPO2046 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YPO1068 drpA; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YPO2878 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YPO2429 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YPO2428 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YPO2369 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YPO0157 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ype03060]
D YPO0229 prlA; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D YPO3753 prlG; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D YPO3499 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D YPO3189 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D YPO3188 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D YPO3190 yajC; putative membrane protein K03210 yajC; preprotein translocase subunit YajC
D YPO4102 yidC; probable membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YPO0564 azi; preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YPO0067 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D YPO0563 putative exported protein K13301 secM; secretion monitor
D YPO3296 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D ffs ffs; Similar to Escherichia coli 4.5S RNA, ffs, 85% identity in 103 nt overlap K01983 ffs; SRP RNA
D YPO3814 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D YPO3778 b3836; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D YPO3777 mtta2; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D YPO3776 mttB; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D YPO2597 tatE; sec-independent protein translocase protein K03425 tatE; sec-independent protein translocase protein TatE
D YPO2717 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YPO0476 b0027; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ype04122]
D YPO2896 iscS; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPO2138 putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPO1194 putative sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D YPO3821 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D YPO0199 conserved hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D YPO0198 conserved hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D YPO0197 conserved hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D YPO1447 putative sulfite reductase subunit protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D YPO1638 asuE; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D YPO1162 chlA5; molybdopterin [mpt] converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D YPO1159 bisA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D YPO1161 chlA4; molybdopterin [mpt] converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D YPO1494 chlN; molybdopterin biosynthesis protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D YPO1160 chlA3; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D YPO0464 chlG; molybdopterin biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D YPO3173 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YPO3741 thiF; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ype03018]
D YPO0786 conserved hypothetical protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D YPO1590 ams; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D YPO3869 mmrA; putative DEAD-box helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D YPO3376 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YPO3490 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D YPO0380 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D YPO3488 csdA; cold-shock dead-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D YPO3833 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YPO3867 nitA; transcription termination factor K03628 rho; transcription termination factor Rho
D YPO0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPO0468 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YPO0351 crpA; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YPO0373 ymr; yersinia multiple regulator K03666 hfq; host factor-I protein
D YPO2836 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D YPO3399 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ype03030]
D YPO1782 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YPO1082 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPO1059 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPO3122 dnaX; DNA polymerase III subunit Tau (contains DNA polymerase III subunit Gamma) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YPO1606 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YPO2608 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YPO0428 b4372; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YPO3442 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YPO4096 dnaN; DNA polymerase III, beta subunit protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YPO0320 b4052; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YPO0644 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D YPO0325 exrB; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YPO1081 dasF; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D YPO1058 b0183; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D YPO0017 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YPO0041 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPO2989 dnaL; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ype03410]
D YPO2239 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D YPO2704 ung; putative uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D YPO0952 mutB; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D YPO0052 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D YPO1834 putative glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YPO4074 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D YPO2168 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D YPO1306 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D YPO0017 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YPO0890 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YPO0041 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPO2989 dnaL; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ype03420]
D YPO1625 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D YPO0324 b4058; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D YPO1156 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D YPO1866 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D YPO3841 mutU; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YPO0017 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YPO0041 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPO2989 dnaL; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ype03430]
D YPO3354 fdv; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D YPO0371 b4170; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D YPO0789 mutH; DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D YPO3841 mutU; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YPO1558 cpeA; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D YPO2872 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D YPO3175 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D YPO0890 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YPO0325 exrB; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YPO1059 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPO4096 dnaN; DNA polymerase III, beta subunit protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YPO3122 dnaX; DNA polymerase III subunit Tau (contains DNA polymerase III subunit Gamma) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YPO2608 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YPO1606 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YPO1082 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPO1782 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YPO3442 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YPO0428 b4372; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YPO0041 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPO2989 dnaL; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPO0154 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPO2088 putative methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:ype03440]
D YPO0890 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YPO0325 exrB; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YPO4095 recF; DNA metabolism protein K03629 recF; DNA replication and repair protein RecF
D YPO2720 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D YPO3120 recR; recombination protein RecR K06187 recR; recombination protein RecR
D YPO3307 lexB; RecA protein K03553 recA; recombination protein RecA
D YPO0017 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YPO2057 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D YPO2058 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D YPO2056 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D YPO0036 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D YPO1020 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D YPO1018 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D YPO1021 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D YPO1059 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPO4096 dnaN; DNA polymerase III, beta subunit protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YPO3122 dnaX; DNA polymerase III subunit Tau (contains DNA polymerase III subunit Gamma) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YPO2608 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YPO1606 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YPO1082 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPO1782 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YPO3442 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YPO0428 b4372; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YPO0110 priA; primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D YPO3538 priB; primosomal replication protein n K02686 priB; primosomal replication protein N
D YPO3127 priC; primosomal replication protein n'' K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ype03250]
D YPO0167 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ype02010]
D YPO3015 cysP; thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D YPO0079 sbp1; exported sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D YPO3014 cysT; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D YPO3013 cysW; sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D YPO3012 cysA; sulfate transport ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D YPO0182 ssiA; putative taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein
D YPO0184 ssiC; putative taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D YPO0183 ssiB; putative taurine transport ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D YPO3624 ssuA; putative aliphatic sulfonates binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D YPO3626 ssuC; putative aliphatic sulfonates transport permease protein K15554 ssuC; sulfonate transport system permease protein
D YPO3627 ssuB; putative aliphatic sulfonates transport ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YPO1145 modA; molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D YPO0080 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D YPO1146 chlJ; molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D YPO1147 chlD; molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D YPO1142 modF; putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein
D YPO2958 sfuA; iron(III)-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D YPO3050 putative exported protein K02012 afuA; iron(III) transport system substrate-binding protein
D YPO2959 sfuB; iron(III)-transport system permease K02011 afuB; iron(III) transport system permease protein
D YPO3049 putative binding protein-dependent transport system, inner-membrane component K02011 afuB; iron(III) transport system permease protein
D YPO2960 sfuC; iron(III)-transport ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YPO3048 probable ABC-transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YPO0522 tbpA; thiamine-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein
D YPO0521 thiP; thiamine transport system permease protein K02063 thiP; thiamine transport system permease protein
D YPO0520 thiQ; thiamine transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D YPO1331 potF; putrescine-binding periplasmic protein precursor K11073 potF; putrescine transport system substrate-binding protein
D YPO1334 potI; putrescine transport system permease protein K11074 potI; putrescine transport system permease protein
D YPO1333 potH; putrescine transport system permease protein K11075 potH; putrescine transport system permease protein
D YPO1332 potG; putrescine transport ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D YPO2645 proU; glycine betaine-binding periplasmic protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D YPO2646 proW; glycine betaine/L-proline transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D YPO2647 proV; glycine betaine/L-proline transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D YPO1197 putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D YPO1199 putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D YPO1198 putative ABC transport ATP-binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D YPO3714 malE; maltose-binding periplasmic protein precursor K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D YPO3715 malF; maltose transport system permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D YPO3716 malG; maltose transport system permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D YPO3712 malK; maltose/maltodextrin transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO2480 mtlK; putative mannitol transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO0857 sugar transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO1896 putative binding-protein-dependent transport system, ATP-binding component K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO0609 putative transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO3469 putative sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO0856 putative sugar-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D YPO0855 putative maltodextrin transport permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D YPO0854 putative maltodextrin permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D YPO1719 putative sugar-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D YPO1722 putative ABC sugar transporter (permease) K10193 togM; oligogalacturonide transport system permease protein
D YPO1721 putative sugar ABC transporter (permease) K10194 togN; oligogalacturonide transport system permease protein
D YPO1720 putative sugar ABC transporter K10195 togA; oligogalacturonide transport system ATP-binding protein
D YPO3572 yrbC; putative exported protein K07323 mlaC; phospholipid transport system substrate-binding protein
D YPO3573 yrbD; putative membrane protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YPO3574 yrbE; putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YPO3571 putative anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D YPO3575 yrbF; putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D YPO0959 putative sugar ABC transporter periplasmic binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YPO2501 rbsB; sugar binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YPO3962 sugar-binding transport protein K10439 rbsB; ribose transport system substrate-binding protein
D YPO0957 putative sugar transport system permease protein K10440 rbsC; ribose transport system permease protein
D YPO2499 rbsC; putative sugar transport system, permease protein K10440 rbsC; ribose transport system permease protein
D YPO3963 sugar transport system permease protein K10440 rbsC; ribose transport system permease protein
D YPO0958 mglA; putative sugar transport ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YPO2500 rbsA; putative sugar transport system, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YPO3964 sugar transport ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YPO0007 ribose permease K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D YPO2255 araF; L-arabinose-binding periplasmic protein precursor K10537 araF; L-arabinose transport system substrate-binding protein
D YPO2257 araH; L-arabinose transport system permease protein K10538 araH; L-arabinose transport system permease protein
D YPO2256 araG; L-arabinose transport ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D YPO3908 putative periplasmic protein precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein
D YPO3905 putative sugar transport system permease K23509 ytfT; galactofuranose transport system permease protein
D YPO3906 putative sugar transport system permease K23509 ytfT; galactofuranose transport system permease protein
D YPO3907 putative sugar transport system ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D YPO1507 mglB; galactose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D YPO1509 mglC; galactoside permease K10541 mglC; methyl-galactoside transport system permease protein
D YPO1508 mglA; galactoside transport ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D YPO4037 sugar-binding periplasmic protein K10543 xylF; D-xylose transport system substrate-binding protein
D YPO4035 sugar transport system permease protein K10544 xylH; D-xylose transport system permease protein
D YPO4036 sugar transport ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D YPO3318 putative sugar ABC transporter, periplasmic protein K17202 eryG; erythritol transport system substrate-binding protein
D YPO3315 rbsC; putative sugar ABC transporter, permease protein K17203 eryF; erythritol transport system permease protein
D YPO3316 putative sugar ABC transporter, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D YPO0860 sugar-binding periplasmic protein K17205 xltC; putative xylitol transport system substrate-binding protein
D YPO0859 sugar transport system permease K17206 xltB; putative xylitol transport system permease protein
D YPO0858 sugar transport ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein
D YPO2581 putative sugar-binding periplasmic protein K17208 ibpA; inositol transport system substrate-binding protein
D YPO2583 sugar transport system permease protein K17209 iatP; inositol transport system permease protein
D YPO2582 sugar transport ATP-binding protein K17210 iatA; inositol transport system ATP-binding protein
D YPO3796 ugpB; glycerol-3-phosphate-binding periplasmic protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D YPO3795 ugpA; sn-glycerol-3-phosphate transport system,permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D YPO3794 ugpE; sn-glycerol-3-phosphate transport system,permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D YPO3793 ugpC; sn-glycerol-3-phosphate transport, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D YPO4117 phoS; putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D YPO3203 pstS; phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D YPO4116 phoW; putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D YPO2835 pstC; putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D YPO4115 phoT; putative phosphate transport system permease K02038 pstA; phosphate transport system permease protein
D YPO2834 pstA; putative phosphate transport system permease K02038 pstA; phosphate transport system permease protein
D YPO4114 phoT; putative phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YPO2833 pstb; putative phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YPO1183 putative substrate-binding periplasmic transport protein K02044 phnD; phosphonate transport system substrate-binding protein
D YPO1184 putative ABC transport membrane permease K02042 phnE; phosphonate transport system permease protein
D YPO1185 putative ABC transport membrane permease K02042 phnE; phosphonate transport system permease protein
D YPO1182 putative ABC transport ATP-binding subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D YPO2776 hisM; histidine transport system permease protein HisM K10015 hisM; histidine transport system permease protein
D YPO2775 hisQ; histidine transport system permease protein HisQ K10016 hisQ; histidine transport system permease protein
D YPO2777 hisP; histidine transport ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D YPO2774 hisJ; histidine-binding periplasmic protein K10014 hisJ; histidine transport system substrate-binding protein
D YPO2512 glnH; putative glutamine-binding periplasmic protein K10036 glnH; glutamine transport system substrate-binding protein
D YPO2513 glnP; putative glutamine transport system permease K10037 glnP; glutamine transport system permease protein
D YPO2514 glnQ; putative glutamine transport ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D YPO1351 artI; arginine-binding periplasmic protein 1 precursor K09997 artI; arginine transport system substrate-binding protein
D YPO1349 artM; arginine transport system permease protein K09998 artM; arginine transport system permease protein
D YPO1350 artQ; arginine transport system permease protein K09999 artQ; arginine transport system permease protein
D YPO1352 artP; arginine transport ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D YPO2615 glnH; putative amino acid-binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D YPO2613 gltK; putative glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D YPO2614 gltJ; putative glutamate/aspartate transport system permease K10003 gltJ; glutamate/aspartate transport system permease protein
D YPO2612 gltL; putative glutamate/aspartate transport ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D YPO1846 fliY; putative cystine-binding periplasmic protein K02424 tcyA; L-cystine transport system substrate-binding protein
D YPO1847 yecS; putative amino-acid ABC transporter (permease) K10009 tcyB; L-cystine transport system permease protein
D YPO1848 yecC; putative amino-acid ABC transporter (ATP-binding protein) K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D YPO3808 livJ; branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YPO3807 livH; high-affinity branched-chain amino acid transport system, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D YPO3806 livM; high-affinity branched-chain amino acid transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D YPO3805 livG; high-affinity branched-chain amino acid transport, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YPO3804 livF; high-affinity branched-chain amino acid transport, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YPO1071 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D YPO1317 putative exported protein K02073 metQ; D-methionine transport system substrate-binding protein
D YPO1072 ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D YPO1319 putative ABC transport integral membrane subunit K02072 metI; D-methionine transport system permease protein
D YPO1073 abc; ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D YPO1318 putative ABC transport ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D YPO1187 putative substrate-binding periplasmic transport protein K11959 urtA; urea transport system substrate-binding protein
D YPO1188 putative Branched-chain amino acid transport system, permease component K11960 urtB; urea transport system permease protein
D YPO1189 putative Branched-chain amino acid transport system, permease component K11961 urtC; urea transport system permease protein
D YPO1190 putative ABC transport ATP-binding subunit K11962 urtD; urea transport system ATP-binding protein
D YPO1191 putative ABC transport ATP-binding subunit K11963 urtE; urea transport system ATP-binding protein
D YPO1155 putative amino acid transporter K11963 urtE; urea transport system ATP-binding protein
D YPO2182 oppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YPO2339 mppA; putative periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YPO2183 oppB; oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D YPO2184 oppC; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D YPO2185 oppD; oligopeptide transport ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D YPO2186 oppF; oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D YPO4003 dppA; periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D YPO4002 dppB; dipeptide transport system permease protein K12369 dppB; dipeptide transport system permease protein
D YPO4001 dppC; dipeptide transport system permease protein K12370 dppC; dipeptide transport system permease protein
D YPO4000 dppD; dipeptide transport ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D YPO3999 dppE; dipeptide transport ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D YPO2355 sapA; peptide transport periplasmic protein precursor K19226 sapA; cationic peptide transport system substrate-binding protein
D YPO2356 sapB; peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D YPO2357 sapC; peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D YPO2358 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D YPO2359 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D YPO1273 putative substrate-binding transport protein K13893 yejA; microcin C transport system substrate-binding protein
D YPO1272 putative ABC transporter integral membrane subunit K13894 yejB; microcin C transport system permease protein
D YPO1271 putative ABC transporter integral membrane subunit K13895 yejE; microcin C transport system permease protein
D YPO1270 putative ABC transporter ATP-binding subunit K13896 yejF; microcin C transport system ATP-binding protein
D YPO0701 periplasmic binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D YPO1536 putative iron-siderophore transport system,periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D YPO1535 putative iron-siderophore transport system,transmembrane component K23186 fepD; iron-siderophore transport system permease protein
D YPO1534 putative iron-siderophore transport system,membrane permease component K23187 fepG; iron-siderophore transport system permease protein
D YPO1533 putative iron-siderophore transport system,ATP-binding component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YPO3391 fhuD; ferrichrome-binding periplasmic protein precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D YPO3390 fhuB; ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D YPO3392 fhuC; ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D YPO3385 btuF; putative priplasmic metal binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D YPO2425 btuC; puative vitamin B12 transport system permease protein K06073 btuC; vitamin B12 transport system permease protein
D YPO2423 btuD; putative vitamin B12 transport ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D YPO2061 znuA; exported high-affinity zinc uptake system protein K09815 znuA; zinc transport system substrate-binding protein
D YPO2059 znuB; high-affinity zinc uptake system membrane protein K09816 znuB; zinc transport system permease protein
D YPO2060 znuC; high-affinity zinc uptake system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D YPO2439 yfeA; periplasmic-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D YPO2441 yfeC; chelated iron transport system membrane protein K11605 sitC; manganese/iron transport system permease protein
D YPO2442 yfeD; chelated iron transport system membrane protein K11606 sitD; manganese/iron transport system permease protein
D YPO2440 yfeB; ATP-binding transport protein K11607 sitB; manganese/iron transport system ATP-binding protein
D YPO0409 putative periplasmic solute-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein
D YPO0411 putative ABC transporter permease protein K10556 lsrC; AI-2 transport system permease protein
D YPO0410 putative ABC transporter permease protein K10557 lsrD; AI-2 transport system permease protein
D YPO0412 putative ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D YPO1626 lolC; lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D YPO1628 lolE; lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D YPO1627 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D YPO2737 ccmD; putative heme exporter protein D K02196 ccmD; heme exporter protein D
D YPO2736 ccmC; putative heme exporter protein C K02195 ccmC; heme exporter protein C
D YPO2735 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D YPO2734 ccmA; putative heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D YPO3440 putative membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D YPO3439 putative membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D YPO3581 yhbG; probable ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D YPO3812 ftsS; cell division protein K09811 ftsX; cell division transport system permease protein
D YPO3813 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D YPO0771 ABC-transporter transmembrane protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YPO1913 irp6; lipoprotein inner membrane ABC-transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YPO0770 ABC-transporter transmembrane protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YPO1914 irp7; inner membrane ABC-transporter YbtQ K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YPO1395 msbA; probable transport ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D YPO3145 mdl; probable ABC transporter (ATP-binding protein) K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D YPO3144 mdl; probable ATP transporter (ATP-binding protein) K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D YPO2588 putative ABC transport protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D YPO3920 ABC transporter protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D YPO1372 cydC; transport ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D YPO1373 cydD; transport ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D YPO1365 putative ABC transporter ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YPO3000 putative ABC transporter, ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:ype02060]
D YPO2994 ptsI; PTS sytem, enzyme I component K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YPO2993 hpr; PTS system, phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D YPO2995 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YPO1608 glcA; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YPO2628 nagE; pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YPO3697 treB; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D YPO4068 mtlA; PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YPO2680 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YPO2678 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YPO2679 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D YPO1758 gptB; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YPO1757 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D YPO1756 gptB; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D YPO0837 putative PTS permease protein K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D YPO0834 manX; putative PTS transport protein K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D YPO0835 putative PTS permease protein K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D YPO0836 putative PTS permease protein K02747 agaE; N-acetylgalactosamine PTS system EIID component
D YPO2569 phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D YPO2782 putative membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D YPO1298 fpr; Similar to Salmonella typhimurium PTS system,fructose-specific IIa/FPr component FruB SW:PTFA_SALTY (P17127) (376 aa) fasta scores: E(): 0, 71.0% id in 376 aa,and to Escherichia coli PTS system, fructose-specific IIa/FPr component FruB SW:PTFA_ECOLI (P24217) (376 aa) fasta scores: E(): 0, 69.4% id in 376 aa K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D YPO1300 fruA; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D YPO1299 fpk; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D YPO0785 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D YPO3587 npr; putative phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D YPO3585 ptsN; nitrogen regulatory IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:ype03070]
D YPO0663 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPCD1.55 YPCD1.55; putative type III secretion protein K03221 yscF; type III secretion protein F
D YPO0260a putative type III secretion apparatus K03221 yscF; type III secretion protein F
D YPCD1.41 YPCD1.41; putative type III secretion protein K04056 yscO; type III secretion protein O
D YPCD1.42 YPCD1.42; putative type III secretion protein K04057 yscP; type III secretion protein P
D YPCD1.36c YPCD1.36c; putative type III secretion protein K04059 yscX; type III secretion protein X
D YPCD1.52 YPCD1.52; putative type III secretion protein K03219 yscC; type III secretion protein C
D YPO0257 possible type III secretion protein K03219 yscC; type III secretion protein C
D YPCD1.39c YPCD1.39c; putative membrane-bound Yop targeting protein K04058 yscW; type III secretion protein W
D YPCD1.59 YPCD1.59; putative type III secretion lipoprotein K03222 yscJ; type III secretion protein J
D YPO0263 type III secretion system apparatus lipoprotein K03222 yscJ; type III secretion protein J
D YPCD1.44 YPCD1.44; putative Yop secretion membrane protein K03226 yscR; type III secretion protein R
D YPO0270 putative type III secretion apparatus protein K03226 yscR; type III secretion protein R
D YPCD1.45 YPCD1.45; putative type III secretion protein K03227 yscS; type III secretion protein S
D YPO0271 putative type III secretion apparatus protein K03227 yscS; type III secretion protein S
D YPCD1.46 YPCD1.46; putative type III secretion protein K03228 yscT; type III secretion protein T
D YPO0272 putative type III secretion apparatus protein K03228 yscT; type III secretion protein T
D YPCD1.47 YPCD1.47; putative type III secretion protein K03229 yscU; type III secretion protein U
D YPO0273 putative type III secretion apparatus protein K03229 yscU; type III secretion protein U
D YPCD1.34c YPCD1.34c; putative membrane-bound Yop protein K03230 yscV; type III secretion protein V
D YPO0266 secretion system apparatus protein K03230 yscV; type III secretion protein V
D YPCD1.40 YPCD1.40; putative Yops secretion ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D YPO0267 putative type III secretion system ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D YPCD1.43 YPCD1.43; putative type III secretion protein K03225 yscQ; type III secretion protein Q
D YPO0269 type III secretion system apparatus protein K03225 yscQ; type III secretion protein Q
D YPCD1.61 YPCD1.61; putative type III secretion protein K03223 yscL; type III secretion protein L
D YPO0816 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D YPO0805 putative lipoprotein K02465 gspS; general secretion pathway protein S
D YPO0817 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D YPO0813 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D YPO0812 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D YPO0811 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D YPO0810 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D YPO0809 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D YPO0808 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D YPO0815 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D YPO0806 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D YPO3189 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D YPO3188 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D YPO3753 prlG; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D YPO3499 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D YPO0229 prlA; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D YPO3190 yajC; putative membrane protein K03210 yajC; preprotein translocase subunit YajC
D YPO4102 yidC; probable membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YPO0564 azi; preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YPO0563 putative exported protein K13301 secM; secretion monitor
D YPO3814 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D YPO0067 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D YPO3296 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YPO3778 b3836; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D YPO3777 mtta2; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D YPO3776 mttB; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D YPO2597 tatE; sec-independent protein translocase protein K03425 tatE; sec-independent protein translocase protein TatE
D YPO2044 putative hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YPO3720 hpmB; hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YPO3721 hemolysin K11016 shlA; hemolysin
D YPO2045 putative hemolysin K11016 shlA; hemolysin
D YPO1387 putative exported protein K12342 yadB_C; adhesin YadB/C
D YPO1388 putative exported protein K12342 yadB_C; adhesin YadB/C
D YPO0764 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO1472 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO0970 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO2725 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO3613 putative Rhs accessory genetic element K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO3606 putative Rhs accessory genetic element K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO0507 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO3708 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPO1470 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPO2937 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPO0973 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPO0502 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPO3596 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D YPO1487 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD
D YPO2935 putative exported protein K11906 vasD; type VI secretion system protein VasD
D YPO0512 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D YPO2724 putative membrane protein K11891 impL; type VI secretion system protein ImpL
D YPO3603 putative exported protein K11891 impL; type VI secretion system protein ImpL
D YPO1482 putative membrane protein K11891 impL; type VI secretion system protein ImpL
D YPO0515 putative membrane protein K11891 impL; type VI secretion system protein ImpL
D YPO3598 putative membrane protein K11892 impK; type VI secretion system protein ImpK
D YPO0975 putative membrane protein K11892 impK; type VI secretion system protein ImpK
D YPO1468 putative membrane protein K11892 impK; type VI secretion system protein ImpK
D YPO0514 putative OmpA-family membrane protein K11892 impK; type VI secretion system protein ImpK
D YPO1471 putative ATPase subunit of ATP-dependent protease K11907 vasG; type VI secretion system protein VasG
D YPO2946 clpB5; Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YPO3599 clpB2; Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YPO0506 clpB; putative Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YPO0971 clpB3; Clp ATPase K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ype02020]
D YPO3204 nmpB; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D YPO3205 phoB; phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D YPO2298 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YPO4117 phoS; putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D YPO3203 pstS; phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D YPO1633 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPO1634 phoP; response regulator protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YPO0137 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D YPO0136 kmt; transcriptional regulatory protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D YPO1222 ompC; outer membrane protein C, porin K09475 ompC; outer membrane pore protein C
D YPO1411 ompF; Outer membrane porin protein F K09476 ompF; outer membrane pore protein F
D YPO0073 cpxA; two component sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YPO0074 cpxR; two component system response regulatory protein K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D YPO0573 putative membrane protein K25864 mzrA; modulator protein MzrA
D YPO2309 rstB; two-component regulatory system, sensor kinase protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D YPO2308 rstA; two-component regulatory system, response regulator protein K07661 rstA; two-component system, OmpR family, response regulator RstA
D YPO3382 degP; global stress requirement protein GsrA K04771 degP; serine protease Do [EC:3.4.21.107]
D YPO0895 creC; putative histidine kinase sensor K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D YPO0896 blrA; putative response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D YPO2853 baeR; two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D YPO2847 yegM; putitive HlyD family secretion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D YPO2848 yegN; AcrB/AcrD/AcrF family membrane protein K07788 mdtB; multidrug efflux pump
D YPO2849 yegO; AcrB/AcrD/AcrF family membrane protein K07789 mdtC; multidrug efflux pump
D YPO2850 yegB; putative membrane protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D YPO3043 multidrug efflux protein K18324 acrD; multidrug efflux pump
D YPO3508 basS; two-component system sensor protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YPO3507 basR; two-component system response regulator K07771 basR; two-component system, OmpR family, response regulator BasR
D YPO2422 conserved hypothteical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YPO2000 putative two-component system sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YPO2001 copR; transcriptional activator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D YPO1663 flhC; flagellum biosynthesis transcription activator K02402 flhC; flagellar transcriptional activator FlhC
D YPO0737 flaA1; putative flagellin K02406 fliC; flagellin
D YPO0738 flaA2; putative flagellin K02406 fliC; flagellin
D YPO0739 flaA3; putative flagellin K02406 fliC; flagellin
D YPO1842 flaF; thermoregulated motility protein K02406 fliC; flagellin
D YPO0745 fliA; putative RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YPO1843 flaD; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YPO1664 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D YPO0746 motA; putative flagellar motor transmembrane channel protein K02556 motA; chemotaxis protein MotA
D YPO2689 kdpD; two-component regulatory protein sensor kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YPO2688 kdpE; two-component regulatory protein response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YPO2692 kdpA; putative potassium-transporting ATPase A chain K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D YPO2691 kdpB; putative potassium-transporting ATPase B chain K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D YPO2690 kdpC; putative potassium-transporting ATPase C chain K01548 kdpC; potassium-transporting ATPase KdpC subunit
D YPO3555 arcB; aerobic respiration control sensor/response regulatory protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D YPO0458 arcA; aerobic respiration control protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D YPO4097 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D YPO1511 maeA; NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D YPO1959 narR; nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D YPO3041 narP; nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D YPO0360 b4154; fumarate reductase flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D YPO0359 b4153; fumarate reductase iron-sulfur protein K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D YPO0358 b4152; fumarate reductase hydrophobic protein K00246 frdC; succinate dehydrogenase subunit C
D YPO0357 b4151; fumarate reductase hydrophobic protein K00247 frdD; succinate dehydrogenase subunit D
D YPO4007 uhpC; putative regulatory protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D YPO4012 uhpA; two-component system response regulator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D YPO1576 putative GerR-family transcriptional regulatory protein K20264 fusR; two-component system, NarL family, response regulator FusR
D YPO1070 rcsF; putative lipoprotein K06080 rcsF; RcsF protein
D YPO1217 rcsC; two component sensor kinase/response regulator protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D YPO1218 rcsB; probable two component response regulator component B K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D YPO3381 barA; two-component regulatory protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D YPO1865 uvrY; response regulator protein K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D YPO3304 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D YPO1925 putative two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D YPO1699 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPO1695 putative membrane protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPO1698 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPO1700 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPO3878 putative fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D YPO1711 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPO1697 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPO1696 probable outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPO3879 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPO1709 htrE; putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPO1305 psaC; outer membrane usher protein PsaC precursor K07347 fimD; outer membrane usher protein
D YPMT1.83 YPMT1.83; putative F1 capsule anchoring protein K07347 fimD; outer membrane usher protein
D YPO1920 probable fimbrial usher protein K07347 fimD; outer membrane usher protein
D YPO0694 putative membrane protein K02279 cpaB; pilus assembly protein CpaB
D YPO0691 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D YPO0690 putative type II secretion protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YPO0689 putative membrane protein K12510 tadB; tight adherence protein B
D YPO0688 putative exported protein K12511 tadC; tight adherence protein C
D YPO1042 glnD; [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D YPO2911 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D YPO0023 glnR; Two component regulatory protein involved in nitrogen assimilation K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D YPO0022 glnG; nitrogen regulation protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D YPO0024 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YPO3992 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YPO3582 glnF; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D YPO2916 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YPO2914 two-component system response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D YPO1678 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D YPO2515 putative chemotactic transducer K03406 mcp; methyl-accepting chemotaxis protein
D YPO1229 cheD2; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YPO1675 cheD; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YPO0802 cheD; putative methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YPO4062 cheM; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D YPO1644 aer; putative methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D YPO1667 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D YPO1666 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YPO1680 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YPO1679 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YPO0256 two-component sensor/regulator K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D YPO0255 putative two-component response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D YPO2612 gltL; putative glutamate/aspartate transport ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D YPO2613 gltK; putative glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D YPO2614 gltJ; putative glutamate/aspartate transport system permease K10003 gltJ; glutamate/aspartate transport system permease protein
D YPO2615 glnH; putative amino acid-binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D YPO0175 cap; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YPO0949 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPO1939 putative glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D YPO1117 cydA; cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D YPO1118 cydB; cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D YPO2252 putative toxin transport protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D YPO0663 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPO3864 nfrC; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D YPO3863 b3787; putative UDP-glucose/GDP-mannose dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D YPO0424 putative pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D YPO1797 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D YPO0720 putative flagellar regulatory protein K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D YPO0960 speC; ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ype02024]
D YPO3300 luxS; autoinducer-2 production protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D YPO0373 ymr; yersinia multiple regulator K03666 hfq; host factor-I protein
D YPO2208 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D YPO2207 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D YPO2411 aroH; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YPO3286 aroF; phospho-2-dehydro-3-deoxyheptonate aldolase,tyr-sensitive K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D YPO2916 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YPO2914 two-component system response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D YPO1663 flhC; flagellum biosynthesis transcription activator K02402 flhC; flagellar transcriptional activator FlhC
D YPO2688 kdpE; two-component regulatory protein response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YPO1576 putative GerR-family transcriptional regulatory protein K20264 fusR; two-component system, NarL family, response regulator FusR
D YPO0409 putative periplasmic solute-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein
D YPO0411 putative ABC transporter permease protein K10556 lsrC; AI-2 transport system permease protein
D YPO0410 putative ABC transporter permease protein K10557 lsrD; AI-2 transport system permease protein
D YPO0412 putative ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D YPO0415 putative carbohydrate kinase K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D YPO0408 putative aldolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D YPO0407 conserved hypothetical protein K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D YPO2530 conserved hypothetical protein K20268 rhiA; rhizosphere induced protein
D YPO2843 putative transport system periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D YPO2029 putative exported protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D YPO2841 putative ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D YPO2030 putative binding-protein-dependent transport system membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D YPO2842 putative ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D YPO2031 putative binding-protein-dependent transport system membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D YPO2846 putitive ABC-transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D YPO3808 livJ; branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YPO3807 livH; high-affinity branched-chain amino acid transport system, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D YPO3806 livM; high-affinity branched-chain amino acid transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D YPO3805 livG; high-affinity branched-chain amino acid transport, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YPO3804 livF; high-affinity branched-chain amino acid transport, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YPO2456 ypeI; N-acylhomoserine lactone synthase YpeI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YPO0984 yspI; N-acylhomoserine lactone synthase YspI K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D YPO2457 ypeR; quorum-sensing transcriptional activator YpeR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YPO0985 yspR; quorum-sensing transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YPO3994 pelY; periplasmic pectate lyase precursor K01728 pel; pectate lyase [EC:4.2.2.2]
D YPO0537 putative AMP-binding enzyme-family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPO2074 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPO0175 cap; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YPO0315 putative regulatory protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D YPO2222 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D YPO3183 ribD; riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D YPO3481 ibeB; probable outer membrane efflux lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D YPO2182 oppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YPO2339 mppA; putative periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YPO2183 oppB; oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D YPO2184 oppC; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D YPO2185 oppD; oligopeptide transport ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D YPO2186 oppF; oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D YPO2660 putative solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YPO3450 putative transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YPO2661 putative membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YPO3451 putative transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YPO2662 binding-protein-dependent transport protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YPO3452 putative ABC transporter transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YPO2663 putative transport ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YPO3453 putative ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YPO2664 putative transport ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YPO4102 yidC; probable membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YPO3753 prlG; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D YPO3499 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D YPO0229 prlA; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D YPO3190 yajC; putative membrane protein K03210 yajC; preprotein translocase subunit YajC
D YPO0564 azi; preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YPO3814 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D YPO0067 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D YPO3296 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ype02030]
D YPO2515 putative chemotactic transducer K03406 mcp; methyl-accepting chemotaxis protein
D YPO1229 cheD2; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YPO1675 cheD; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YPO0802 cheD; putative methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YPO4062 cheM; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D YPO1644 aer; putative methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D YPO3714 malE; maltose-binding periplasmic protein precursor K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D YPO0959 putative sugar ABC transporter periplasmic binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YPO2501 rbsB; sugar binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YPO3962 sugar-binding transport protein K10439 rbsB; ribose transport system substrate-binding protein
D YPO1507 mglB; galactose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D YPO4003 dppA; periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D YPO1666 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YPO1667 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D YPO1680 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YPO1681 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D YPO1679 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YPO1678 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D YPO0715 fla; puative flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D YPO1829 fla_AII.2; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D YPO1823 CheC2; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D YPO0711 fliM; putative flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D YPO1822 flaN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YPO0710 fliN; flagellar switch protein K02417 fliN; flagellar motor switch protein FliN
D YPO1664 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D YPO0746 motA; putative flagellar motor transmembrane channel protein K02556 motA; chemotaxis protein MotA
D YPO1665 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D YPO0747 lafU; putative chemotaxis membrane protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ype02040]
D YPO0713 fliE; putative flagellar hook-basal body complex protein K02408 fliE; flagellar hook-basal body complex protein FliE
D YPO1831 fla_AI; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D YPO0714 fliF; putative flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D YPO1830 fla_AII.1; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D YPO0715 fla; puative flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D YPO1829 fla_AII.2; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D YPO0716 fliH; putative flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D YPO1828 fla_AII.3; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D YPO0717 fla; putative flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YPO1827 fla_AIII; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YPO1826 flaO; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D YPO1825 fliK; flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D YPO0743 putative flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D YPO1824 cheC1; flagellar protein FliL K02415 fliL; flagellar protein FliL
D YPO0744 putative flagellar biogenesis protein K02415 fliL; flagellar protein FliL
D YPO1823 CheC2; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D YPO0711 fliM; putative flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D YPO1822 flaN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YPO0710 fliN; flagellar switch protein K02417 fliN; flagellar motor switch protein FliN
D YPO1821 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D YPO1820 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D YPO0709 fliP; putative flagellar assembly protein K02419 fliP; flagellar biosynthesis protein FliP
D YPO1820a fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D YPO0708 fliQ; putative flagellar assembly protein K02420 fliQ; flagellar biosynthesis protein FliQ
D YPO1819 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D YPO0707 fliR; putative flagellar assembly protein K02421 fliR; flagellar biosynthesis protein FliR
D YPO1792 flhE; flagellar protein FlhE precursor K03516 flhE; flagellar protein FlhE
D YPO1791 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D YPO1790 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D YPO0706 flhB; putative flagellar assembly protein K02401 flhB; flagellar biosynthesis protein FlhB
D YPO1798 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YPO0721 flgA; putative flagella basal body P-ring formation protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YPO1799 fla_FII; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D YPO0722 flgB; putative flagellar basal-body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D YPO1800 fla_FIII; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D YPO0723 flgC; putative flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D YPO1801 Fla_FIV; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D YPO0724 flgD; putative basal-body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D YPO1802 Fla_FV; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D YPO0725 flgE; putative flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D YPO1803 fla_FVI; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D YPO1804 fla_FVII; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D YPO0728 flgG; putative flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D YPO1805 fla_FVIII; flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH
D YPO0729 flgH; putative flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D YPO1806 fla_FIX; flagellar P-ring protein precursor K02394 flgI; flagellar P-ring protein FlgI
D YPO0730 flgI; putative flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D YPO1807 fla_FX; flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D YPO0731 flgJ; putative flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D YPO1808 flaS; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D YPO0732 flgK; putative flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D YPO1809 flaT; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D YPO0733 flgL; putative flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D YPO0737 flaA1; putative flagellin K02406 fliC; flagellin
D YPO0738 flaA2; putative flagellin K02406 fliC; flagellin
D YPO0739 flaA3; putative flagellin K02406 fliC; flagellin
D YPO1842 flaF; thermoregulated motility protein K02406 fliC; flagellin
D YPO0740 fliD; putative flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D YPO1841 flaV; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D YPO0741 fliS; putative flagellar protein K02422 fliS; flagellar secretion chaperone FliS
D YPO1840 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D YPO1839 fliT; FliT K02423 fliT; flagellar protein FliT
D YPO1664 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D YPO0746 motA; putative flagellar motor transmembrane channel protein K02556 motA; chemotaxis protein MotA
D YPO1665 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D YPO0747 lafU; putative chemotaxis membrane protein K02557 motB; chemotaxis protein MotB
D YPO1797 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D YPO0720 putative flagellar regulatory protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D YPO1796 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D YPO0719 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN
D YPO1846 fliY; putative cystine-binding periplasmic protein K02424 tcyA; L-cystine transport system substrate-binding protein
D YPO1844 fliZ; putative alternative sigma factor regulatory protein K02425 fliZ; regulator of sigma S factor FliZ
D YPO0643 alt; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D YPO1663 flhC; flagellum biosynthesis transcription activator K02402 flhC; flagellar transcriptional activator FlhC
D YPO3582 glnF; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D YPO0745 fliA; putative RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YPO1843 flaD; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D YPO3376 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D YPO3722 metH; 5-Methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection [PATH:ype05135]
D YPO3944 putative invasin K13735 yeeJ; adhesin/invasin
D YPCD1.72c YPCD1.72c; putative targeted effector protein kinase K23472 ypkA; serine/threonine protein kinase YpkA [EC:2.7.11.1]
D YPCD1.20 YPCD1.20; putative cytotoxic effector protein K08599 yopT; YopT peptidase [EC:3.4.22.-]
D YPCD1.06 YPCD1.06; putative outer membrane virulence protein K23473 yopE; outer membrane virulence protein YopE
D YPCD1.67c YPCD1.67c; putative protein-tyrosine phosphatase Yop effector K23474 yopH; tyrosine-protein phosphatase YopH [EC:3.1.3.48]
D YPCD1.29c YPCD1.29c; putative Yop targeting protein K23475 yopB; transloator
D YPCD1.28c YPCD1.28c; putative Yop negative regulation/targeting component K23476 yopD; transloator
D YPCD1.19c YPCD1.19c; putative virulence determinant protein K23477 yopQ; protein YopQ
D YPCD1.26c YPCD1.26c; putative targeted effector protein K23478 yopM; outer membrane protein YopM
D YPCD1.71c YPCD1.71c; putative targeted effector protein K08598 yopJ; YopJ protease family
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
D YPO3944 putative invasin K13735 yeeJ; adhesin/invasin
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ype01501]
D YPO1411 ompF; Outer membrane porin protein F K09476 ompF; outer membrane pore protein F
D YPO1222 ompC; outer membrane protein C, porin K09475 ompC; outer membrane pore protein C
D YPO3162 ampG; Beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D YPO1615 ycfO; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D YPO2182 oppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YPO2339 mppA; putative periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YPO2183 oppB; oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D YPO2184 oppC; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D YPO2185 oppD; oligopeptide transport ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D YPO2186 oppF; oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D YPO3483 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPO3132 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPO3133 acrB; multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPO3482 multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPO1001 putative integral membrane efflux protein K18138 acrB; multidrug efflux pump
D YPO3481 ibeB; probable outer membrane efflux lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D YPO0663 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPO0145 b3396; penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YPO2604 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D YPO0549 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:ype01502]
D YPO0557 ddl; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YPO0321 alr; alanine racemase (biosynthetic) K01775 alr; alanine racemase [EC:5.1.1.1]
D YPO0551 mra; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin o pimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D YPO0552 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YPO0555 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentape p tide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ype01503]
D YPO1633 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPO1634 phoP; response regulator protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YPO4013 yhjW; putative membrane protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D YPO1744 putative exported protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D YPO2422 conserved hypothteical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YPO2421 pmrF; probable glycosyl transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D YPO2420 probable formyl transferase K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D YPO2419 conserved hypothetical protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D YPO2418 dolichyl-phosphate-mannose-protein mannosyltransferase-family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D YPO2417 putative membrane protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D YPO2416 putative membrane protein K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D YPO3508 basS; two-component system sensor protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YPO3507 basR; two-component system response regulator K07771 basR; two-component system, OmpR family, response regulator BasR
D YPO2377 putative membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D YPO2355 sapA; peptide transport periplasmic protein precursor K19226 sapA; cationic peptide transport system substrate-binding protein
D YPO2356 sapB; peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D YPO2357 sapC; peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D YPO2358 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D YPO2359 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D YPO3973 metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D YPO1067 cutF; putative copper homeostasis lipoprotein K06079 cutF; copper homeostasis protein (lipoprotein)
D YPO0073 cpxA; two component sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YPO0074 cpxR; two component system response regulatory protein K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D YPO1023 N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPO0370 putative N-acetylmuramoyl-L-alanine amidase-family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPO3382 degP; global stress requirement protein GsrA K04771 degP; serine protease Do [EC:3.4.21.107]
D YPO0015 dsbA; secreted thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D YPO0167 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YPO3483 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPO3132 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPO3133 acrB; multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPO3482 multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPO1001 putative integral membrane efflux protein K18138 acrB; multidrug efflux pump
D YPO0663 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPO1056 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosa m ine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ype01000]
C 01001 Protein kinases [BR:ype01001]
D YPO1734 conserved hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D YPCD1.72c YPCD1.72c; putative targeted effector protein kinase K23472 ypkA; serine/threonine protein kinase YpkA [EC:2.7.11.1]
D YPO3204 nmpB; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D YPO1633 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPO0137 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D YPO2309 rstB; two-component regulatory system, sensor kinase protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D YPO0073 cpxA; two component sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YPO0895 creC; putative histidine kinase sensor K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D YPO3508 basS; two-component system sensor protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YPO2000 putative two-component system sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YPO2689 kdpD; two-component regulatory protein sensor kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YPO3555 arcB; aerobic respiration control sensor/response regulatory protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D YPO2997 putative two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YPO1959 narR; nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D YPO1217 rcsC; two component sensor kinase/response regulator protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D YPO3381 barA; two-component regulatory protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D YPO3943 putative membrane protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YPO0023 glnR; Two component regulatory protein involved in nitrogen assimilation K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D YPO2916 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YPO1666 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YPO0256 two-component sensor/regulator K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
C 01009 Protein phosphatases and associated proteins [BR:ype01009]
D YPO0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPO3119 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YPO0442 b4388; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:ype01002]
D YPO0476 b0027; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D YPO0806 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D YPO0695 putative membrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D YPPCP1.07 YPPCP1.07; coagulase/fibrinolysin precursor K08566 pla; plasminogen activator [EC:3.4.23.48]
D YPO2703 pcp; putative pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D YPO2870 guaA; putative GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D YPO1275 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D YPO2385 putative exported protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D YPO2415 nlpC; putative lipoprotein K13695 nlpC; probable lipoprotein NlpC
D YPO2772 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D YPO3557 aspB; glutamate synthase [NADPH] large chain precursor K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D YPO4118 glmS; glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D YPO2623 asnB; asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D YPCD1.71c YPCD1.71c; putative targeted effector protein K08598 yopJ; YopJ protease family
D YPO3172 thiJ; 4-methyl-5(B-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme K03152 thiJ; protein deglycase [EC:3.5.1.124]
D YPCD1.20 YPCD1.20; putative cytotoxic effector protein K08599 yopT; YopT peptidase [EC:3.4.22.-]
D YPO1407 putative exported protein K21470 ycbB; L,D-transpeptidase YcbB
D YPO0983 putative membrane protein K07052 K07052; CAAX protease family protein
D YPO1140 putative membrane protein K07052 K07052; CAAX protease family protein
D YPO1414 pepN; putative aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D YPO3975 opdA; oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D YPO3973 metalloprotease K01406 prtC; serralysin [EC:3.4.24.40]
D YPO3676 putative phage-related protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D YPO1019 ptr; protease III precursor K01407 ptrA; protease III [EC:3.4.24.55]
D YPO3991 putative insulinase family protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D YPO3441 carP; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D YPO2889 pepB; peptidase B K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D YPO3053 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D YPO1631 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D YPO1009 probable peptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D YPO3230 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D YPO3249 putative amino acid hydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D YPO2062 putative M23/M37 peptidase-family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D YPO1043 ampM; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D YPO3337 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D YPO3765 pepQ; proline dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D YPO0910 pepP; proline-specific aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D YPO2310 putative carboxypeptidase K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D YPO3502 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D YPO1706 htpX; putative heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D YPO0927 putative lipoprotein K07387 K07387; metalloprotease [EC:3.4.24.-]
D YPO3069 putative exported protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D YPO1051 putative membrane protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D YPO2752 mepA; putative penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D YPO1732 conserved hypothetical protein K09933 mtfA; MtfA peptidase
D YPO2319 putative pepetidase K04775 ydgD; protease YdgD [EC:3.4.21.-]
D YPO3382 degP; global stress requirement protein GsrA K04771 degP; serine protease Do [EC:3.4.21.107]
D YPO3566 degQ; protease K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D YPO3568 degS; protease K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D YPO1780 ptrB; oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D YPO1320 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YPO2601 dacA; putative penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YPO1176 pbpG; penicillin-binding protein 7 precursor K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D YPO1224 ampH; putative penicillin-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D YPO3506 dacB; penicillin-binding protein 4 precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D YPO3157 clpP; ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D YPO3155 capR; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D YPO1431 putative Lon protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D YPO0314 b4043; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D YPO2717 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D YPO1781 pip; proline iminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D YPO1705 prc; tail-specific protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D YPO2162 sppA; protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D YPO2216 sohB; peptidase family U7 protein K04774 sohB; serine protease SohB [EC:3.4.21.-]
D YPO0121 glpG; probable membrane protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D YPO0106 hslV; heat shock protein K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D YPO2855 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D YPO3480 conserved hypothetical protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D YPO3479 putative protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D YPO3692 pmbA; Putative modulator of DNA gyrase K03592 pmbA; PmbA protein
D YPO3672 tldD; putative modulator of DNA gyrase K03568 tldD; TldD protein
D YPO1211 eco; putative ecotin precursor K08276 eco; ecotin
D YPO2573 putative membrane protein K06894 yfhM; alpha-2-macroglobulin
D YPO0376 hflA; putative membrane protein K04087 hflC; modulator of FtsH protease HflC
D YPO0375 hflA; putative membrane protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:ype01003]
D YPO1983 putative glycosyl transferase K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D YPO3939 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D YPO3552 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YPO3393 b0149; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D YPO0145 b3396; penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YPO3855 rffM; probable UDP-N-acetyl-D-mannosaminuronic acid transferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D YPO3857 conserved hypothetical protein K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D YPO3866 b3784; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D YPO1953 hmsR; haemin storage system, HmsR protein K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ype01005]
D YPO1056 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucosa m ine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D YPO1057 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D YPO0561 asmB; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D YPO1054 firA; UDP-3-o-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D YPO3075 conserved hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D YPO1396 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D YPO2063 msbB; lipid A biosynthesis acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D YPO3632 ddg; putative membrane protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D YPO1276 putative membrane protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D YPO0055 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D YPO2418 dolichyl-phosphate-mannose-protein mannosyltransferase-family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D YPO1744 putative exported protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D YPO2377 putative membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D YPO4013 yhjW; putative membrane protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D YPO2021 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D YPO1400 kdsB; putative 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D YPO3578 conserved hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D YPO3577 conserved hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D YPO0056 rfa-2; lipopolysaccharide heptosyltransferase-1 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D YPO0054 kdtX; lipopolysaccharide core biosynthesis glycosyl transferase K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D YPO0057 rfaF; ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D YPO0416 putative lipopolysaccharide core biosynthesis protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D YPO3243 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D YPO1074 conserved hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D YPO0654 rfaE; ADP-heptose synthase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D YPO0058 htrM; ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D YPO3107 wbyJ; putative mannosyltransferase K13000 wbyJ; mannosyltransferase [EC:2.4.1.-]
D YPO3104 wbyK; putative mannosyltransferase K13001 wbyK; mannosyltransferase [EC:2.4.1.-]
D YPO3098 wbyL; probable glycosyltransferase K13002 wbyL; glycosyltransferase [EC:2.4.1.-]
D YPO3856 rffT; probable 4-alpha-L-fucosyltransferase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D YPO3866 b3784; putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ype01011]
D YPO3569 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D YPO3760 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D YPO0556 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D YPO0553 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D YPO0550 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diam i nopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D YPO0557 ddl; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D YPO0321 alr; alanine racemase (biosynthetic) K01775 alr; alanine racemase [EC:5.1.1.1]
D YPO3909 dga; putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D YPO0552 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D YPO0555 murG; UDP-N-acetylglucosamine:N-acetylmuramyl-(pentape p tide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D YPO0649 bacA; putative bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YPO1324 putative permease K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D YPO2043 mviN; putative membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D YPO0145 b3396; penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D YPO3393 b0149; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D YPO2604 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D YPO0549 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YPO1320 dacC; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YPO2601 dacA; putative penicillin-binding protein 5 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D YPO3506 dacB; penicillin-binding protein 4 precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D YPO1224 ampH; putative penicillin-binding protein K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D YPO1176 pbpG; penicillin-binding protein 7 precursor K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D YPO3552 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D YPO1407 putative exported protein K21470 ycbB; L,D-transpeptidase YcbB
D YPO2752 mepA; putative penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D YPO2385 putative exported protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D YPO1275 spr; putative lipoprotein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D YPO2062 putative M23/M37 peptidase-family protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D YPO3676 putative phage-related protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D YPO0452 slt; putative soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D YPO1025 membrane-bound lytic murein transglycosylase A precursor K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D YPO2957 mltB; putative membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D YPO2081 putative lipoprotein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D YPO0954 mltC; membrane-bound lytic murein transglycosylase C K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D YPO1078 dniR; membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D YPO2438 putative membrane-bound lytic murein transglycosylase K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D YPO2922 putative membrane protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D YPO1604 yceG; putative exported protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D YPO2602 rlpA; rare lipoprotein A precursor K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D YPO1023 N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPO0370 putative N-acetylmuramoyl-L-alanine amidase-family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPO1715 b0867; probable N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPO3423 ampD; putative signalling protein in beta-lactamase regulation K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPO2394 lpp; major outer membrane lipoprotein K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:ype01004]
D YPO1463 putative acyl transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YPO1598 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D YPO1597 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D YPO1455 putative beta-ketoacyl-[acyl-carrier-protein] synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YPO2757 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D YPO1601 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D YPO1456 putative beta-ketoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPO1599 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D YPO1430 fabA; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D YPO1454 putative (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YPO1055 fabZ; (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase (EC 4.2.1.-) K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D YPO4104 conserved hypothetical protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D YPO3080 apeA; putative acyl-CoA thioesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D YPO3141 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D YPO2195 putative acyl-CoA thioester hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D YPO3151 conserved hypothetical protein K12500 tesC; thioesterase III [EC:3.1.2.-]
D YPO1910 irp1; yersiniabactin biosynthetic protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D YPO1911 irp2; yersiniabactin biosynthetic protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D YPO0253 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D YPO0537 putative AMP-binding enzyme-family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPO2074 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPO0312 b4041; glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D YPO1596 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D YPO0647 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D YPO0672 parF; putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ype01008]
D YPO1580 putative phosphopantetheinyl transferase K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
D YPO1910 irp1; yersiniabactin biosynthetic protein K04786 irp1; yersiniabactin nonribosomal peptide/polyketide synthase
D YPO1911 irp2; yersiniabactin biosynthetic protein K04784 irp2; yersiniabactin nonribosomal peptide synthetase
D YPO1907 irp5; yersiniabactin siderophore biosynthetic protein K04783 irp5; yersiniabactin salicyl-AMP ligase [EC:6.3.2.-]
D YPO0776 putative siderophore biosysnthesis protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D YPO1909 irp3; yersiniabactin biosynthetic protein YbtU K04785 irp3; yersiniabactin synthetase, thiazolinyl reductase component
D YPO0774 conserved hypothetical protein K12241 pchG; pyochelin biosynthesis protein PchG
D YPO1908 irp4; yersiniabactin biosynthetic protein YbtT K05374 irp4; yersiniabactin synthetase, thioesterase component
C 01006 Prenyltransferases [BR:ype01006]
D YPO3176 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D YPO3513 cel; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D YPO1049 rth; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D YPO0372 b4171; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D YPO0104 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D YPO0311 b4040; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D YPO3168 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ype01007]
D YPO2984 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YPO2630 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D YPO3398 yadB; putative glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D YPO2369 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YPO0157 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YPO3073 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D YPO2046 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YPO1522 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YPO0475 b0026; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YPO3443 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YPO2610 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YPO0888 asuD; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YPO2053 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YPO1412 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D YPO2878 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YPO4072 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D YPO4071 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D YPO1379 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YPO1068 drpA; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YPO2433 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YPO3305 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YPO2429 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YPO2428 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YPO1410 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D YPO4082 avtA; valine--pyruvate aminotransferase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D YPO2558 aat; probable aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D YPO2975 putative aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D YPO0322 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D YPO1547 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D YPO0059 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D YPO1152 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D YPO3006 putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D YPO1962 argM; succinylornithine aminotransferase K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D YPO2844 gabT; putative aminobutyrate aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D YPO1150 bioA; adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D YPO3389 gsa; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D YPO3899 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D YPO1389 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D YPO2422 conserved hypothteical protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D YPO3859 b3791; putative lipopolysaccharide biosynthesis protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ype00194]
D YPO4120 atpC; ATP synthase epsilon subunit protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D YPO4121 atpD; ATP synthase beta subunit protein K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D YPO4122 atpG; ATP synthase gamma subunit protein K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D YPO4123 atpA; ATP synthase alpha subunit protein K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D YPO4124 atpH; ATP synthase delta subunit protein K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D YPO4125 atpF; ATP synthase subunit B protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D YPO4126 atpE; ATP synthase subunit C protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D YPO4127 atpB; ATP synthase subunit B protein K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YPO4128 atpI; ATP synthase protein I K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ype03000]
D YPO2258 araC; arabinose operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D YPO0333 b3906; L-rhamnose operon transcriptional activator K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D YPO0332 b3905; L-rhamnose operon regulatory protein K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D YPO2681 celD; cel operon repressor K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D YPO1912 ybtA; transcriptional regulator YbtA K05372 ybtA; AraC family transcriptional regulator
D YPO0456 rob; putative right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D YPCD1.49 YPCD1.49; putative thermoregulatory protein K20968 exsA; AraC family transcriptional regulator, exoenzyme S synthesis regulatory protein ExsA
D YPO0072 bifunctional regulatory protein/DNA repair protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D YPO1029 gcvA; glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D YPO3889 ilvY; LysR-family transcriptional regulatory protein K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D YPO3789 metR; lysR-family transcriptional regulatory protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D YPO0471 antO; transcriptional activator protein NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D YPO3915 oxyR; oxidative stress transcriptional regulatory protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D YPO0916 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D YPO0535 leuO; LysR-family transcriptional regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D YPO2219 cysB; cys regulon transcriptional activator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D YPO2497 putativeLlysR-family transcriptional regulatory protein K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D YPO0084 possible transcriptional regulator K16516 galR; LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
D YPO3683 probable lysR-family transcriptional regulatory protein K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D YPO3904 LysR-family transcriptional regulatory protein K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D YPO1322 deoR; deoxyribose operon repressor K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D YPO0120 glpR; glycerol-3-phosphate repressor protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D YPO0831 DeoR-family regulatory protein K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor
D YPO3327 fucR; putative deoR-family regulatory protein K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D YPO0849 lacI; lactose operon repressor K27069 lacI; LacI family transcriptional regulator, lactose operon repressor
D YPO2283 putative LacI-family transcriptional regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPO4034 putative AraC-family transcriptional regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPO0758 LacI-family regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPO0795 galR; galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPO0611 LacI-family regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPO2498 putative LacI-family transcriptional regulatory protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D YPO0108 cytR; transcriptional repressor K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D YPO0543 cra; putative fructose repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D YPO3698 treR; trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D YPO2387 purR; purine nucleotide synthesis repressor K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D YPO3955 gntR; gluconate utilization system Gnt-I transcriptional repressor K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D YPO2537 putative LacI-family transcriptional regulatory protein K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator
D YPO3456 phnF; probable gntR-family transcriptional regulatory protein K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D YPO1973 hutC; putative GntR-family transcriptional regulatory protein K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D YPO1890 GntR-family putative transcriptional regulatory protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D YPO2144 fadR; fatty acid metabolism regulatory protein K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D YPO3420 aceC; pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D YPO1279 putative transcriptional regulatory protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D YPO0576 exuR; exu regulon transcriptional regulator K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D YPO2845 putative GntR-family regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D YPO1167 betI; TetR-family regulatory protein K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D YPO3131 acrR; putative tetR-family transcriptional regulatory protein K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D YPO0046 ttk; TetR-family regulatory protein K05501 slmA; TetR/AcrR family transcriptional regulator
D YPO2378 TetR-family transcriptional regulatory protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D YPO3913 TetR-family transcriptional regulatory protein K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D YPO0002 asnC; regulatory protein K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D YPO1375 alsB; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YPO1651 AsnC-family transcriptional regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YPO3146 probable AsnC-family regulatory protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D YPO2457 ypeR; quorum-sensing transcriptional activator YpeR K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YPO0985 yspR; quorum-sensing transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D YPO0123 malT; maltose regulon positive regulatory protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D YPO2374 slyA; MarR-family transcriptional regulatory protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D YPO3266 emrR; MarR-family transcriptional regulatory protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D YPO3085 cueR; putative regulatory protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D YPO0236 MerR-family transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D YPO2634 fur; ferric uptake regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D YPO0315 putative regulatory protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D YPO1714 kdgR; IclR-family transcriptional regulatory protein K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D YPO0175 cap; cAMP-regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D YPO2300 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D YPO2897 conserved hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D YPO0379 conserved hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D YPO3346 arsR; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D YPO2065 hexR; hex regulon repressor K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D YPO3759 bioR; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D YPO3654 fiS; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D YPO0453 rtrY; putative Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D YPO2785 nlp; putative DNA-binding protein K07724 ner; Ner family transcriptional regulator
D YPO0524 conserved hypothetical protein K11925 sgrR; SgrR family transcriptional regulator
D YPO0444 b4390; transcriptional regulator NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D YPO0881 conserved hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D YPO3978 putative regulatory protein K02647 cdaR; carbohydrate diacid regulator
D YPO1143 modE; molybdenum transport protein ModE K02019 modE; molybdate transport system regulatory protein
D YPO0114 metJ; transcriptional repressor protein K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D YPO1851 poaA; bifunctional PutA protein [includes: proline dehydrogenase and delta-1-pyrroline-5-carboxylate K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D YPO3160 bolA; BolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D YPMT1.59c YPMT1.59c; putative DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPMT1.67c YPMT1.67c; putative partitioning protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPCD1.12c YPCD1.12c; putative plasmid partitioning control protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPO3770 hlyT; putative regulatory protein K05785 rfaH; transcriptional antiterminator RfaH
D YPO3517 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D YPO2625 nagC; putative N-acetylglucosamine regulatory protein K02565 nagC; N-acetylglucosamine repressor
D YPO2268 mlc; putative ROK family transcriptional regulatory protein K15545 mlc; transcriptional regulator of PTS gene
D YPO4066 mtlR; mannitol operon repressor K02562 mtlR; mannitol operon repressor
D YPO2344 tyrR; transcriptional regulatory protein K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D YPO3063 gcvR; glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D YPO2352 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D YPO2349 pspC; phage shock protein C K03973 pspC; phage shock protein C
D YPO3695 rnk; regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase
D YPO1904 putative transcriptional regulator K07733 alpA; prophage regulatory protein
D YPO0878 putative regulatory protein K07733 alpA; prophage regulatory protein
D YPO0936 conserved hypothetical protein K07735 algH; putative transcriptional regulator
D YPO3397 dksA; DnaK suppressor protein homologue K06204 dksA; RNA polymerase-binding transcription factor
D YPO3184 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D YPO3223 crl; curlin genes regulatory protein K11926 crl; sigma factor-binding protein Crl
D YPO0546 conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ype03021]
D YPO0234 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YPO3747 groN; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YPO3746 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YPO0039 rpoZ; DNA-directed RNA polymerase, omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D YPO0643 alt; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D YPO3355 appR; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D YPO2711 rpoE; RNA polymerase sigma E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D YPO3811 fam; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D YPO3582 glnF; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D YPO0745 fliA; putative RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YPO1843 flaD; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YPO0517 hepA; RNA polymerase associated helicase K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D YPO3497 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D YPO3181 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D YPO3752 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D YPO3561 pog; putative stringent starvation protein A K03599 sspA; stringent starvation protein A
D YPO3560 sspB; putative stringent starvation protein B K03600 sspB; stringent starvation protein B
D YPO2712 mclA; sigma E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D YPO2713 rseB; sigma E factor regulatory protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D YPO2714 rseC; sigma E factor regulatory protein K03803 rseC; sigma-E factor negative regulatory protein RseC
D YPO3397 dksA; DnaK suppressor protein homologue K06204 dksA; RNA polymerase-binding transcription factor
D YPO3505 greA; transcription elongation factor K03624 greA; transcription elongation factor GreA
D YPO0135 greB; transcription elongation factor K04760 greB; transcription elongation factor GreB
D YPO3867 nitA; transcription termination factor K03628 rho; transcription termination factor Rho
D YPO1064 conserved hypothetical protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:ype03019]
D YPO1590 ams; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D YPO3669 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D YPO2718 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YPO0380 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D YPO0366 b4162; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D YPO3869 mmrA; putative DEAD-box helicase K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D YPO3488 csdA; cold-shock dead-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D YPO3833 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YPO3376 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YPO3490 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D YPO3867 nitA; transcription termination factor K03628 rho; transcription termination factor Rho
D YPO0078 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D YPO0468 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YPO0351 crpA; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YPO0373 ymr; yersinia multiple regulator K03666 hfq; host factor-I protein
D YPO2836 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D YPO3399 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D YPO0786 conserved hypothetical protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D YPO3304 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D YPO3664 yhdA; putative exported protein K18765 csrD; RNase E specificity factor CsrD
D YPO0103 menG; S-adenosylmethionine:2-demethylmenaquinone methyltransferase K02553 rraA; regulator of ribonuclease activity A
D YPO3445 conserved hypothetical protein K09893 rraB; regulator of ribonuclease activity B
D YPO3586 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D YPO2322 hrpA; ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D YPO3394 hrpB; ATP-dependent helicase K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:ype03011]
D YPO1392 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D YPO1044 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D YPO0216 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D YPO0233 ramA; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D YPO0226 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D YPO3539 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D YPO0201 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D YPO0223 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D YPO3562 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D YPO0209 nusE; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D YPO0232 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D YPO0200 rpsl; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D YPO0231 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D YPO0222a rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D YPO3493 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D YPO3295 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D YPO0219 neaA; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D YPO3537 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D YPO0214 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D YPO0472 b0023; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D YPO0645 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D YPO3750 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D YPO0213 rplB; 50S ribosomal protein l2 K02886 RP-L2; large subunit ribosomal protein L2
D YPO0210 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D YPO0211 eryA; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D YPO0222 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D YPO0224 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D YPO3536 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D YPO3749 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D YPO3751 relC; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D YPO3748 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D YPO3563 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D YPO0220 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D YPO0228 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D YPO0217 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D YPO0235 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D YPO0225 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D YPO3292 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D YPO2430 pdzA; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D YPO3512 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D YPO0215 eryB; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D YPO0212 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D YPO0221 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D YPO3511 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D YPO0050 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D YPO0218 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D YPO0227 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D YPO0111 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D YPO3134 ykgM; putative ribosomal protein K02909 RP-L31; large subunit ribosomal protein L31
D YPO1595 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D YPO0051 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D YPO4100 rimA; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D YPO2431 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D YPO0230 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D YPO3135 putative ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D YPO1264 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D 5S_rRNA-4 5S_rRNA; partial 5SrRNA lacking the first 100 bases. K01985 5SrRNA; 5S ribosomal RNA
D 16S_rRNA-4 16S_rRNA; match to 16S_rRNA 1..1489 (EMBL:YPE16SA) K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-6 16S_rRNA; match to 16S_rRNA 1..1489 (EMBL:YPE16SA) K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA-6 23S_rRNA; match to 23S_rRNA 1..2906 (Y. enterocolitica 23S EMBL:U77925) K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-5 23S_rRNA; match to 23S_rRNA 1..2906 (Y. enterocolitica 23S EMBL:U77925) K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ype03009]
D YPO2718 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YPO1734 conserved hypothetical protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D YPO0366 b4162; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D YPO2719 era; putative GTP-binding protein K03595 era; GTPase
D YPO3509 putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D YPO3397 dksA; DnaK suppressor protein homologue K06204 dksA; RNA polymerase-binding transcription factor
D YPO3497 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D YPO3181 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D YPO3752 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D YPO1266 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D YPO0492 b0051; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D YPO0240 conserved hypothetical protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D YPO0427 b4371; ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D YPO3816 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D YPO0934 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D YPO4129 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D YPO0547 conserved hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D YPO3547 putative tetrapyrrole methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D YPO3974 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D YPO1748 rrmA; rRNA (guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D YPO0381 putative methylase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D YPO3503 ftsJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D YPO2519 conserved hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D YPO0588 putative methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D YPO2605 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D YPO1445 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D YPO3976 conserved hypothetical protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D YPO1418 conserved hypothetical protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D YPO1031 conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D YPO2882 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D YPO1336 putative RNA methyltransferase K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D YPO0497 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D YPO2213 putative RNA pseudouridylate synthase-family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D YPO1591 rluC; ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D YPO3277 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D YPO1640 ymfC; putative pseudouridine synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D YPO3269 yfiF; putative tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D YPO0429 b4373; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D YPO2041 rimJ; ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D YPO3294 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D YPO1385 conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D YPO3656 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D YPO2750 conserved hypothetical protein K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D YPO1632 conserved hypothetical protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D YPO1590 ams; ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12]
D YPO3669 cafA; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D YPO0937 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D YPO1776 dbpA; ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D YPO3488 csdA; cold-shock dead-box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D YPO2708 rbaB; ATP-dependent RNA helicase K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D YPO0365 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D YPO2875 engA; putative GTP-binding protein K03977 engA; GTPase
D YPO0374 hflX; GTP-binding protein K03665 hflX; GTPase
D YPO0245a conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D YPO0038 spoT; guanosine-3',5'-bisbis(diphosphate) 3'-pyrophosphydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D YPO3495 p15B; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D YPO3498 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D YPO2825 conserved hypothetical protein K14761 rlbA; ribosome-associated protein
D YPO2606 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D YPO2618 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D YPO3504 conserved hypothetical protein K07574 yhbY; RNA-binding protein
D YPO4065 conserved hypothetical protein K14762 yibL; ribosome-associated protein
D YPO3691 conserved hypothetical protein K09889 yjgA; ribosome-associated protein
D YPO1423a rmf; putative ribosome modulation factor K03812 rmf; ribosome modulation factor
D YPO3279 yfiA; putative sigma 54 modulation protein K05809 raiA; ribosome-associated inhibitor A
D YPO2010 ychF; conserved hypothetical protein K06942 ychF; ribosome-binding ATPase
D YPO1594 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ype03016]
D YPO0650 cca; tRNA nucleotidyltransferase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D YPO2984 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YPO1068 drpA; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D YPO0475 b0026; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D YPO2610 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YPO1522 metG; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D YPO2630 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D YPO2046 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YPO0888 asuD; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D YPO2053 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YPO3305 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D YPO1412 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D YPO2433 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D YPO1379 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D YPO3073 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D YPO3443 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D YPO2878 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D YPO2429 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D YPO2428 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D YPO2369 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YPO0157 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D YPO0029 conserved hypothetical protein K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D YPO1611 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D YPO0951 Putative methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D YPO1069 conserved hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D YPO2766 asuC; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D YPO3494 p35; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D YPO3359 conserved hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D YPO2896 iscS; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPO2138 putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPO0245a conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D YPO0372 b4171; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D YPO4103 thdF; putative thiophene and furan oxidation protein K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D YPO4130 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D YPO2164 fdhB; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D YPO3529 amtA; inositol monophosphatase family protein K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D YPO4101 rnpA; ribonuclease P protein K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D rnpB rnpB; Similar to Escherichia coli RNase P, RNA component involved in tRNA and 4.5S RNA-processing, rnpB, 92% identity in 347 nt overlap K01978 rnpB; M1 RNA
D YPO2382 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D YPO0044 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D YPO2235 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D YPO2075 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D YPO3395 ligT; putative 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D YPO4072 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D YPO4071 glyS; glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D YPO3398 yadB; putative glutamyl-tRNA synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D YPO3088 conserved hypothetical protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D YPO2923 putative zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D YPO0316 conserved hypothetical protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D YPO3655 conserved hypothetical protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D YPO1175 conserved hypothetical protein K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D YPO2620 miaB; putative tRNA-thiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D YPO2050 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D YPO2049 conserved hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D YPO1402 smtA; putative methyltransferase K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D YPO3911 trmA; tRNA (uracil-5)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D YPO3293 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D YPO3269 yfiF; putative tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D YPO0037 spoU; tRNA (guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D YPO2898 putative SpoU-family rRNA methylase K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D YPO0071 putative methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D YPO2709 conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D YPO1038 Conserved hypothetical protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D YPO0497 rluA; ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D YPO1638 asuE; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D YPO2335 conserved hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D YPO3821 conserved hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D YPO0199 conserved hypothetical protein K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D YPO0198 conserved hypothetical protein K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D YPO0197 conserved hypothetical protein K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D YPO1447 putative sulfite reductase subunit protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D YPO2894 conserved hypothetical protein K13628 iscA; iron-sulfur cluster assembly protein
D YPO0898 conserved hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D YPO2756 conserved hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D YPO3192 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D YPO3150 conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D YPO3373 ygcM; putative 6-pyruvoyl tetrahydrobiopterin synthase family protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D YPO3374 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D YPO1034 conserved hypothetical protein K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D YPO0367 putative iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D YPO3191 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D YPO3173 thiI; thiamine biosynthesis protein K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D YPO1062 conserved hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D YPO3056 putative acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D YPO2072 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D YPO0646 gcp; putative glycoprotease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D YPO0369 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D YPO1026 conserved hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D YPO0380 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D YPO3490 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ype03012]
D YPO2228 translation initiation factor SUI1 family protein K03113 EIF1; translation initiation factor 1
D YPO3496 infB; translation initiation factor IF2-2 K02519 infB; translation initiation factor IF-2
D YPO2432 fit; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D YPO1045 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D YPO3754 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D YPO0203 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D YPO0202 far; elongation factor G K02355 fusA; elongation factor G
D YPO2017 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D YPO1047 b0172; ribosome recycling factor K02838 frr; ribosome recycling factor
D YPO2018 putative protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D YPO2011 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D YPO1370 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D YPO0354 b4147; elongation factor P K02356 efp; elongation factor P
D YPO1284 putative elongation factor P K02356 efp; elongation factor P
D YPO0362 b4155; putative lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D YPO0353 conserved hypothetical protein K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D YPO2754 conserved hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D YPO0889 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D YPO0430 b4375; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D YPO0237 conserved hypothetical protein K09890 arfA; alternative ribosome-rescue factor
D YPO1066 conserved hypothetical protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ype03110]
D YPO1368 clpA; ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D YPO3275 clpB; Clp ATPase K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D YPO3156 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D YPO0105 hslU; ATP-binding heat shock protein K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D YPO3119 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YPO0468 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YPO2892 hsc; chaperone protein HscA K04044 hscA; molecular chaperone HscA
D YPO2840 putative heat shock protein K04046 yegD; hypothetical chaperone protein
D YPO0351 crpA; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YPO0469 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D YPO0496 b0055; DnaJ-like protein K05801 djlA; DnaJ like chaperone protein
D YPO2893 hscB; chaperone protein HscB K04082 hscB; molecular chaperone HscB
D YPO0139 hslO; heat-shock chaperonin K04083 hslO; molecular chaperone Hsp33
D YPO1107 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D YPO4085 hslT; heat shock protein K04080 ibpA; molecular chaperone IbpA
D YPO4084 hslS; heat shock protein K04081 ibpB; molecular chaperone IbpB
D YPO0140 hslR; heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D YPO0350 crpB; 10 kDa chaperonin K04078 groES; chaperonin GroES
D YPO3382 degP; global stress requirement protein GsrA K04771 degP; serine protease Do [EC:3.4.21.107]
D YPO3502 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D YPO4127 atpB; ATP synthase subunit B protein K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D YPO3878 putative fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D YPO1711 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPO1697 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPO0067 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D YPO0075 cpxP; putative exported protein K06006 cpxP; periplasmic protein CpxP/Spy
D YPO2674 putative exported protein K19778 hdeB; acid stress chaperone HdeB
D YPO3322 conserved hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D YPO2968 conserved hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D YPO0167 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YPO3074 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D YPO3153 ppiD; peptidyl-prolyl cis-trans isomerase D K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D YPO0195 fkpA; peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D YPO3532 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D YPO0476a b0028; FKBP-type peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D YPO0193 slyD; peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D YPO3873 ppiC; peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D YPO0494 b0053; survival protein SurA precursor (peptidyl-prolyl cis-trans isomerase) K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D YPO3868 fipA; thioredoxin 1 K03671 TXN; thioredoxin
D YPO3270 trxC; thioredoxin 2 K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D YPO3082 ybbN; putative thioredoxin K05838 ybbN; putative thioredoxin
D YPO1327 grxA; glutaredoxin 1 K03674 grxA; glutaredoxin 1
D YPO0066 grxC; glutaredoxin K03676 grxC; glutaredoxin 3
D YPO2383 conserved hypothetical protein K07390 grxD; monothiol glutaredoxin
D YPO0015 dsbA; secreted thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D YPO2141 dsbB; disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D YPO0891 dsbC; thiol:disulfide interchange protein (DsbC) K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D YPO0345 cycZ; thiol:disulfide interchange protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D YPO2740 ccmG; thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:ype04131]
D YPO2883 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D YPO2157 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YPO1133 gpm; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D YPO2064 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPO2393 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPO3119 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:ype04121]
C 03051 Proteasome [BR:ype03051]
D YPO3119 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ype03032]
D YPO1081 dasF; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D YPO3731 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D YPO3154 hopD; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D YPO2427 hid; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D YPO1393 himD; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D YPO4097 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D YPO0320 b4052; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D YPO0644 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D YPO0325 exrB; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YPO1059 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPO4096 dnaN; DNA polymerase III, beta subunit protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YPO3442 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YPO2608 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YPO1606 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YPO1082 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPO3122 dnaX; DNA polymerase III subunit Tau (contains DNA polymerase III subunit Gamma) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YPO0428 b4372; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YPO1782 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YPO1058 b0183; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D YPO0017 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YPO0041 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPO2989 dnaL; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPO2265 tau; DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
D YPO0154 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPO2088 putative methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPO2685 seqA; putative negative regulator of replication initiation K03645 seqA; negative modulator of initiation of replication
D YPO3071 conserved hypothetical protein K10763 hda; DnaA-homolog protein
D YPO1216 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D YPO4094 acrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D YPO0671 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D YPO0668 nfxD; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D YPO2218 supX; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D YPO2165 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ype03036]
D YPO2718 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D YPO2175 bglY; DNA-binding protein Hns K03746 hns; DNA-binding protein H-NS
D YPO3731 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D YPO3154 hopD; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D YPO2427 hid; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D YPO1393 himD; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D YPO0456 rob; putative right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D YPO4097 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D YPO3550 probable phosphosugar isomerase K12961 diaA; DnaA initiator-associating protein
D YPO1444 conserved hypothetical protein K11940 hspQ; heat shock protein HspQ
D YPO2510 dps; putative DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein
D YPO3654 fiS; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D YPO0373 ymr; yersinia multiple regulator K03666 hfq; host factor-I protein
D YPO0916 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D YPO1375 alsB; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YPO1651 AsnC-family transcriptional regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D YPO1262 putative nucleoid-associated protein K06899 ndpA; nucleoid-associated protein
D YPO1405 mukB; cell division protein K03632 mukB; chromosome partition protein MukB
D YPO1404 kicA; conserved hypothetical protein K03804 mukE; chromosome partition protein MukE
D YPO1403 kicB; putative killing factor protein K03633 mukF; chromosome partition protein MukF
D YPO0559 divA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D YPO3362 conserved hypothetical protein K05589 ftsB; cell division protein FtsB
D YPO3813 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D YPO0549 ftsI; penicillin-binding protein 3 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D YPO1376 ftsK; putative cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D YPO0548 ftsL; putative cell division protein K03586 ftsL; cell division protein FtsL
D YPO0107 ftsN; cell division protein K03591 ftsN; cell division protein FtsN
D YPO0558 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D YPO0554 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D YPO3812 ftsS; cell division protein K09811 ftsX; cell division transport system permease protein
D YPO0560 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YPO2990 zipA; putative cell division protein K03528 zipA; cell division protein ZipA
D YPO0912 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D YPO0093 conserved hypothetical protein K09892 zapB; cell division protein ZapB
D YPO1416 conserved hypothetical protein K18657 zapC; cell division protein ZapC
D YPO3431 conserved hypothetical protein K18778 zapD; cell division protein ZapD
D YPO3564 conserved hypothetical protein K06916 zapE; cell division protein ZapE
D YPO3533 conserved hypothetical protein K07269 ytfB; cell division protein YtfB
D YPO1023 N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPO0370 putative N-acetylmuramoyl-L-alanine amidase-family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPO3483 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPO3132 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPO2078 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D YPO2077 minD; septum site-determining protein K03609 minD; septum site-determining protein MinD
D YPO2076 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D YPO1436 sfiA; putative cell division inhibitor K13053 sulA; cell division inhibitor SulA
D YPO0046 ttk; TetR-family regulatory protein K05501 slmA; TetR/AcrR family transcriptional regulator
D YPO2685 seqA; putative negative regulator of replication initiation K03645 seqA; negative modulator of initiation of replication
D YPO3665 envB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D YPO3666 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D YPO3667 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D YPO2603 mrdB; rod shape-determining protein K05837 rodA; rod shape determining protein RodA
D YPCD1.13c YPCD1.13c; putative plasmid partitioning transcription repressor K03496 parA; chromosome partitioning protein
D YPMT1.68c YPMT1.68c; putative partitioning protein A K03496 parA; chromosome partitioning protein
D YPMT1.59c YPMT1.59c; putative DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPMT1.67c YPMT1.67c; putative partitioning protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPCD1.12c YPCD1.12c; putative plasmid partitioning control protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPO0671 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D YPO0668 nfxD; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D YPO4130 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D YPO4129 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D YPO3843 xerC; putative integrase/recombinase K03733 xerC; integrase/recombinase XerC
D YPO0892 xerD; integrase/recombinase K04763 xerD; integrase/recombinase XerD
D YPO1523 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D YPO0019 conserved hypothetical protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ype03400]
D YPO2299 ogt; putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D YPO2695 phr; putative deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D YPO2704 ung; putative uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D YPO0952 mutB; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D YPO2239 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D YPO0565 mutT; mutator protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D YPO0047 dnaS; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D YPO0072 bifunctional regulatory protein/DNA repair protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D YPO1834 putative glycosidase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D YPO4074 tag; DNA-3-methyladenine glycosylase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D YPO0052 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D YPO2168 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D YPO1306 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D YPO3733 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D YPO0890 recJ; single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D YPO0041 putative DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPO2989 dnaL; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D YPO0017 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D YPO0324 b4058; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D YPO1156 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D YPO1866 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D YPO3841 mutU; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D YPO3747 groN; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D YPO3746 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D YPO0234 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D YPO0039 rpoZ; DNA-directed RNA polymerase, omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D YPO1625 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D YPO3354 fdv; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D YPO0371 b4170; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D YPO0789 mutH; DNA mismatch repair protein K03573 mutH; DNA mismatch repair protein MutH
D YPO1558 cpeA; exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D YPO2872 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D YPO3175 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D YPO1059 dnaE; DNA polymerase III, alpha chain K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D YPO4096 dnaN; DNA polymerase III, beta subunit protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D YPO3442 holC; DNA polymerase III, chi subunit K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D YPO2608 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D YPO1606 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D YPO1082 dnaQ; DNA polymerase III, epsilon chain K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D YPO3122 dnaX; DNA polymerase III subunit Tau (contains DNA polymerase III subunit Gamma) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D YPO0428 b4372; DNA polymerase III, psi subunit K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D YPO1782 holE; DNA polymerase III, theta subunit K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D YPO0325 exrB; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YPO0154 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPO2088 putative methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPO1020 recB; exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D YPO1018 recC; exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D YPO1021 recD; exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D YPO3307 lexB; RecA protein K03553 recA; recombination protein RecA
D YPO2057 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D YPO2058 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D YPO2056 ruvC; crossover junction endodeoxyribonuclease K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D YPO0110 priA; primosomal protein n' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D YPO3538 priB; primosomal replication protein n K02686 priB; primosomal replication protein N
D YPO3127 priC; primosomal replication protein n'' K04067 priC; primosomal replication protein N''
D YPO3206 sbcD; exonuclease SbcD K03547 sbcD; DNA repair protein SbcD/Mre11
D YPO0443 b4389; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D YPO4095 recF; DNA metabolism protein K03629 recF; DNA replication and repair protein RecF
D YPO0036 recG; ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D YPO2720 recO; DNA repair protein K03584 recO; DNA repair protein RecO (recombination protein O)
D YPO3120 recR; recombination protein RecR K06187 recR; recombination protein RecR
D YPO1105 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D YPO3212 rdgC; recombination associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D YPO2468 conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D YPO1265 putative DEAD box helicase family protein K19789 radD; DNA repair protein RadD
D YPO0168 conserved hypothetical protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D YPO1216 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D YPO4094 acrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D YPO2218 supX; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D YPO3731 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D YPO3154 hopD; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D YPO3654 fiS; DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D YPO2427 hid; integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha
D YPO1393 himD; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D YPO3833 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D YPO2175 bglY; DNA-binding protein Hns K03746 hns; DNA-binding protein H-NS
D YPO3231 dinP; DNA-damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D YPO0314 b4043; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D YPO0518 dinA; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D YPO1586 dinI; DNA-damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I
D YPO3306 oraA; putative regulatory protein K03565 recX; regulatory protein
D YPO3872 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D YPO1440 putative helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D YPO1206 dinG; putative ATP-dependent helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D YPO2071 putative DEAD box family helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D YPO1214 dnaF; ribonucleoside-diphosphate reductase 1 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YPO2649 nrdE; ribonucleoside-diphosphate reductase 2 alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D YPO1213 ftsB; ribonucleoside-diphosphate reductase 1 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D YPO2648 nrdF; ribonucleoside-diphosphate reductase 2 beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:ype03029]
D YPO3496 infB; translation initiation factor IF2-2 K02519 infB; translation initiation factor IF-2
D YPO2432 fit; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D YPO1045 tsf; elongation factor Ts K02357 tsf; elongation factor Ts
D YPO3754 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D YPO0203 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D YPO0202 far; elongation factor G K02355 fusA; elongation factor G
D YPO2719 era; putative GTP-binding protein K03595 era; GTPase
D YPO2369 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D YPO2610 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D YPO2053 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D YPO2046 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D YPO0325 exrB; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D YPO1052 putative surface antigen K07277 SAM50; outer membrane protein insertion porin family
D YPO0468 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YPO1107 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D YPO0351 crpA; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YPO0350 crpB; 10 kDa chaperonin K04078 groES; chaperonin GroES
D YPO0469 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D YPO2896 iscS; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPO2138 putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPO2893 hscB; chaperone protein HscB K04082 hscB; molecular chaperone HscB
D YPO2383 conserved hypothetical protein K07390 grxD; monothiol glutaredoxin
D YPO1523 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D YPO3168 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D YPO4102 yidC; probable membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YPO3119 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ype02000]
D YPO0771 ABC-transporter transmembrane protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YPO1913 irp6; lipoprotein inner membrane ABC-transporter K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D YPO0770 ABC-transporter transmembrane protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YPO1914 irp7; inner membrane ABC-transporter YbtQ K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D YPO1395 msbA; probable transport ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D YPO3145 mdl; probable ABC transporter (ATP-binding protein) K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D YPO3144 mdl; probable ATP transporter (ATP-binding protein) K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D YPO2252 putative toxin transport protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D YPO2588 putative ABC transport protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D YPO1735 putative ABC transporter (ATP-binding protein) K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D YPO3920 ABC transporter protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D YPO1372 cydC; transport ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D YPO1373 cydD; transport ATP-binding protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D YPO1365 putative ABC transporter ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YPO3000 putative ABC transporter, ATP-binding protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D YPO1419 uup; ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D YPO3015 cysP; thiosulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D YPO0079 sbp1; exported sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D YPO3014 cysT; sulfate transport system permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D YPO3013 cysW; sulfate transport system permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D YPO3012 cysA; sulfate transport ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D YPO1145 modA; molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D YPO0080 hypothetical protein K02020 modA; molybdate transport system substrate-binding protein
D YPO1146 chlJ; molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D YPO1147 chlD; molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D YPO1142 modF; putative molybdenum transport ATP-binding protein modF K05776 modF; molybdate transport system ATP-binding protein
D YPO0182 ssiA; putative taurine-binding periplasmic protein precursor K15551 tauA; taurine transport system substrate-binding protein
D YPO0184 ssiC; putative taurine transport system permease protein K15552 tauC; taurine transport system permease protein
D YPO0183 ssiB; putative taurine transport ATP-binding protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D YPO3624 ssuA; putative aliphatic sulfonates binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D YPO3626 ssuC; putative aliphatic sulfonates transport permease protein K15554 ssuC; sulfonate transport system permease protein
D YPO3627 ssuB; putative aliphatic sulfonates transport ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D YPO2958 sfuA; iron(III)-binding periplasmic protein K02012 afuA; iron(III) transport system substrate-binding protein
D YPO3050 putative exported protein K02012 afuA; iron(III) transport system substrate-binding protein
D YPO2959 sfuB; iron(III)-transport system permease K02011 afuB; iron(III) transport system permease protein
D YPO3049 putative binding protein-dependent transport system, inner-membrane component K02011 afuB; iron(III) transport system permease protein
D YPO2960 sfuC; iron(III)-transport ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YPO3048 probable ABC-transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D YPO0522 tbpA; thiamine-binding periplasmic protein K02064 thiB; thiamine transport system substrate-binding protein
D YPO0521 thiP; thiamine transport system permease protein K02063 thiP; thiamine transport system permease protein
D YPO0520 thiQ; thiamine transport ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D YPO1331 potF; putrescine-binding periplasmic protein precursor K11073 potF; putrescine transport system substrate-binding protein
D YPO1334 potI; putrescine transport system permease protein K11074 potI; putrescine transport system permease protein
D YPO1333 potH; putrescine transport system permease protein K11075 potH; putrescine transport system permease protein
D YPO1332 potG; putrescine transport ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D YPO2843 putative transport system periplasmic protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D YPO2029 putative exported protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D YPO2841 putative ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D YPO2030 putative binding-protein-dependent transport system membrane protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D YPO2842 putative ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D YPO2031 putative binding-protein-dependent transport system membrane protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D YPO2846 putitive ABC-transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D YPO2645 proU; glycine betaine-binding periplasmic protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D YPO2646 proW; glycine betaine/L-proline transport system permease K02001 proW; glycine betaine/proline transport system permease protein
D YPO2647 proV; glycine betaine/L-proline transport ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D YPO1197 putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D YPO1199 putative ABC transport integral membrane subunit K05846 opuBD; osmoprotectant transport system permease protein
D YPO1198 putative ABC transport ATP-binding subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D YPO2286 conserved hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D YPO2287 putative transport system permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D YPO3714 malE; maltose-binding periplasmic protein precursor K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D YPO3715 malF; maltose transport system permease protein MalF K10109 malF; maltose/maltodextrin transport system permease protein
D YPO3716 malG; maltose transport system permease protein MalG K10110 malG; maltose/maltodextrin transport system permease protein
D YPO3712 malK; maltose/maltodextrin transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO2480 mtlK; putative mannitol transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO0857 sugar transport ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO1896 putative binding-protein-dependent transport system, ATP-binding component K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO0609 putative transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO3469 putative sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO0856 putative sugar-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D YPO0855 putative maltodextrin transport permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D YPO0854 putative maltodextrin permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D YPO2255 araF; L-arabinose-binding periplasmic protein precursor K10537 araF; L-arabinose transport system substrate-binding protein
D YPO2257 araH; L-arabinose transport system permease protein K10538 araH; L-arabinose transport system permease protein
D YPO2256 araG; L-arabinose transport ATP-binding protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D YPO1719 putative sugar-binding protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D YPO1722 putative ABC sugar transporter (permease) K10193 togM; oligogalacturonide transport system permease protein
D YPO1721 putative sugar ABC transporter (permease) K10194 togN; oligogalacturonide transport system permease protein
D YPO1720 putative sugar ABC transporter K10195 togA; oligogalacturonide transport system ATP-binding protein
D YPO1507 mglB; galactose-binding protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D YPO1509 mglC; galactoside permease K10541 mglC; methyl-galactoside transport system permease protein
D YPO1508 mglA; galactoside transport ATP-binding protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D YPO4037 sugar-binding periplasmic protein K10543 xylF; D-xylose transport system substrate-binding protein
D YPO4035 sugar transport system permease protein K10544 xylH; D-xylose transport system permease protein
D YPO4036 sugar transport ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D YPO0959 putative sugar ABC transporter periplasmic binding protein K10439 rbsB; ribose transport system substrate-binding protein
D YPO2501 rbsB; sugar binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D YPO3962 sugar-binding transport protein K10439 rbsB; ribose transport system substrate-binding protein
D YPO0957 putative sugar transport system permease protein K10440 rbsC; ribose transport system permease protein
D YPO2499 rbsC; putative sugar transport system, permease protein K10440 rbsC; ribose transport system permease protein
D YPO3963 sugar transport system permease protein K10440 rbsC; ribose transport system permease protein
D YPO0958 mglA; putative sugar transport ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YPO2500 rbsA; putative sugar transport system, ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YPO3964 sugar transport ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D YPO3908 putative periplasmic protein precursor K23508 ytfQ; galactofuranose transport system substrate-binding protein
D YPO3905 putative sugar transport system permease K23509 ytfT; galactofuranose transport system permease protein
D YPO3906 putative sugar transport system permease K23509 ytfT; galactofuranose transport system permease protein
D YPO3907 putative sugar transport system ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D YPO3318 putative sugar ABC transporter, periplasmic protein K17202 eryG; erythritol transport system substrate-binding protein
D YPO3315 rbsC; putative sugar ABC transporter, permease protein K17203 eryF; erythritol transport system permease protein
D YPO3316 putative sugar ABC transporter, ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein
D YPO0860 sugar-binding periplasmic protein K17205 xltC; putative xylitol transport system substrate-binding protein
D YPO0859 sugar transport system permease K17206 xltB; putative xylitol transport system permease protein
D YPO0858 sugar transport ATP-binding protein K17207 xltA; putative xylitol transport system ATP-binding protein
D YPO2581 putative sugar-binding periplasmic protein K17208 ibpA; inositol transport system substrate-binding protein
D YPO2583 sugar transport system permease protein K17209 iatP; inositol transport system permease protein
D YPO2582 sugar transport ATP-binding protein K17210 iatA; inositol transport system ATP-binding protein
D YPO3796 ugpB; glycerol-3-phosphate-binding periplasmic protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D YPO3795 ugpA; sn-glycerol-3-phosphate transport system,permease protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D YPO3794 ugpE; sn-glycerol-3-phosphate transport system,permease protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D YPO3793 ugpC; sn-glycerol-3-phosphate transport, ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D YPO0409 putative periplasmic solute-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein
D YPO0411 putative ABC transporter permease protein K10556 lsrC; AI-2 transport system permease protein
D YPO0410 putative ABC transporter permease protein K10557 lsrD; AI-2 transport system permease protein
D YPO0412 putative ABC transporter ATP-binding protein K10558 lsrA; AI-2 transport system ATP-binding protein
D YPO3573 yrbD; putative membrane protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D YPO3574 yrbE; putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D YPO3575 yrbF; putative ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D YPO3572 yrbC; putative exported protein K07323 mlaC; phospholipid transport system substrate-binding protein
D YPO3571 putative anti-sigma B factor antagonist K07122 mlaB; phospholipid transport system transporter-binding protein
D YPO2477 putative solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YPO1893 putative exported solute-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YPO0612 putative sugar binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YPO3472 putative sugar binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D YPO0613 putative permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D YPO2476 sugar ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D YPO3471 sugar transport system, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D YPO1894 putative binding-protein-dependent transport system, inner membrane component K02025 ABC.MS.P; multiple sugar transport system permease protein
D YPO0614 putative permease K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YPO1895 putative binding-protein-dependent transport system, inner membrane component K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YPO2475 sugar ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YPO3470 sugar transport system, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D YPO3633 putative periplasmic binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YPO3328 putative sugar ABC transporter, periplasmic protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YPO1293 putative periplasmic carbohydrate-binding transport protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YPO1813 putative sugar-binding periplasmic protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YPO1517 putative sugar ABC transporter K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D YPO1553 ribose transport system, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YPO3636 putative ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YPO3635 putative branched-chain amino acid transport system, permease component K02057 ABC.SS.P; simple sugar transport system permease protein
D YPO3332 putative sugar ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YPO3331 putative sugar ABC transporter, permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YPO1295 putative ABC transport integral membrane subunit K02057 ABC.SS.P; simple sugar transport system permease protein
D YPO1812 putative sugar transport system permease protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YPO1815 putative sugar ABC transporter, permease K02057 ABC.SS.P; simple sugar transport system permease protein
D YPO3620 putative carbohydrate transport protein K02057 ABC.SS.P; simple sugar transport system permease protein
D YPO3330 putative sugar ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO1294 putative ABC transport ATP-binding subunit K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO1814 putative sugar ABC transporter, ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO3634 ABC transporter ATP binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D YPO4117 phoS; putative phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D YPO3203 pstS; phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D YPO4116 phoW; putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D YPO2835 pstC; putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D YPO4115 phoT; putative phosphate transport system permease K02038 pstA; phosphate transport system permease protein
D YPO2834 pstA; putative phosphate transport system permease K02038 pstA; phosphate transport system permease protein
D YPO4114 phoT; putative phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YPO2833 pstb; putative phosphate transport ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D YPO1183 putative substrate-binding periplasmic transport protein K02044 phnD; phosphonate transport system substrate-binding protein
D YPO1184 putative ABC transport membrane permease K02042 phnE; phosphonate transport system permease protein
D YPO1185 putative ABC transport membrane permease K02042 phnE; phosphonate transport system permease protein
D YPO1182 putative ABC transport ATP-binding subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D YPO2776 hisM; histidine transport system permease protein HisM K10015 hisM; histidine transport system permease protein
D YPO2775 hisQ; histidine transport system permease protein HisQ K10016 hisQ; histidine transport system permease protein
D YPO2777 hisP; histidine transport ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D YPO2774 hisJ; histidine-binding periplasmic protein K10014 hisJ; histidine transport system substrate-binding protein
D YPO2512 glnH; putative glutamine-binding periplasmic protein K10036 glnH; glutamine transport system substrate-binding protein
D YPO2513 glnP; putative glutamine transport system permease K10037 glnP; glutamine transport system permease protein
D YPO2514 glnQ; putative glutamine transport ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D YPO1351 artI; arginine-binding periplasmic protein 1 precursor K09997 artI; arginine transport system substrate-binding protein
D YPO1349 artM; arginine transport system permease protein K09998 artM; arginine transport system permease protein
D YPO1350 artQ; arginine transport system permease protein K09999 artQ; arginine transport system permease protein
D YPO1352 artP; arginine transport ATP-binding protein K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D YPO2615 glnH; putative amino acid-binding protein precursor K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D YPO2613 gltK; putative glutamate/aspartate transport system permease K10002 gltK; glutamate/aspartate transport system permease protein
D YPO2614 gltJ; putative glutamate/aspartate transport system permease K10003 gltJ; glutamate/aspartate transport system permease protein
D YPO2612 gltL; putative glutamate/aspartate transport ATP-binding protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D YPO1846 fliY; putative cystine-binding periplasmic protein K02424 tcyA; L-cystine transport system substrate-binding protein
D YPO1847 yecS; putative amino-acid ABC transporter (permease) K10009 tcyB; L-cystine transport system permease protein
D YPO1848 yecC; putative amino-acid ABC transporter (ATP-binding protein) K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D YPO3808 livJ; branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D YPO3807 livH; high-affinity branched-chain amino acid transport system, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D YPO3806 livM; high-affinity branched-chain amino acid transport system, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D YPO3805 livG; high-affinity branched-chain amino acid transport, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D YPO3804 livF; high-affinity branched-chain amino acid transport, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D YPO1071 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D YPO1317 putative exported protein K02073 metQ; D-methionine transport system substrate-binding protein
D YPO1072 ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D YPO1319 putative ABC transport integral membrane subunit K02072 metI; D-methionine transport system permease protein
D YPO1073 abc; ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D YPO1318 putative ABC transport ATP-binding subunit K02071 metN; D-methionine transport system ATP-binding protein
D YPO1187 putative substrate-binding periplasmic transport protein K11959 urtA; urea transport system substrate-binding protein
D YPO1188 putative Branched-chain amino acid transport system, permease component K11960 urtB; urea transport system permease protein
D YPO1189 putative Branched-chain amino acid transport system, permease component K11961 urtC; urea transport system permease protein
D YPO1190 putative ABC transport ATP-binding subunit K11962 urtD; urea transport system ATP-binding protein
D YPO1191 putative ABC transport ATP-binding subunit K11963 urtE; urea transport system ATP-binding protein
D YPO1155 putative amino acid transporter K11963 urtE; urea transport system ATP-binding protein
D YPO4111 putative periplasmic solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YPO3257 putative amino acid ABC transporter, periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D YPO4109 putative amino acid transport system permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D YPO4110 ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D YPO3255 putative amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D YPO3256 putative amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D YPO3254 putative amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D YPO2182 oppA; periplasmic oligopeptide-binding protein precursor K15580 oppA; oligopeptide transport system substrate-binding protein
D YPO2339 mppA; putative periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D YPO2183 oppB; oligopeptide transport system permease protein K15581 oppB; oligopeptide transport system permease protein
D YPO2184 oppC; oligopeptide transport system permease protein K15582 oppC; oligopeptide transport system permease protein
D YPO2185 oppD; oligopeptide transport ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D YPO2186 oppF; oligopeptide transport ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D YPO4003 dppA; periplasmic dipeptide transport protein K12368 dppA; dipeptide transport system substrate-binding protein
D YPO4002 dppB; dipeptide transport system permease protein K12369 dppB; dipeptide transport system permease protein
D YPO4001 dppC; dipeptide transport system permease protein K12370 dppC; dipeptide transport system permease protein
D YPO4000 dppD; dipeptide transport ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein
D YPO3999 dppE; dipeptide transport ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D YPO2355 sapA; peptide transport periplasmic protein precursor K19226 sapA; cationic peptide transport system substrate-binding protein
D YPO2356 sapB; peptide transport system permease protein K19227 sapB; cationic peptide transport system permease protein
D YPO2357 sapC; peptide transport system permease protein K19228 sapC; cationic peptide transport system permease protein
D YPO2358 sapD; peptide transport system ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein
D YPO2359 sapF; peptide transport system ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein
D YPO2660 putative solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D YPO3450 putative transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YPO2661 putative membrane protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D YPO3451 putative transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YPO2662 binding-protein-dependent transport protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D YPO3452 putative ABC transporter transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YPO2663 putative transport ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein
D YPO3453 putative ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YPO2664 putative transport ATPase K02032 ddpF; peptide/nickel transport system ATP-binding protein
D YPO1273 putative substrate-binding transport protein K13893 yejA; microcin C transport system substrate-binding protein
D YPO1272 putative ABC transporter integral membrane subunit K13894 yejB; microcin C transport system permease protein
D YPO1271 putative ABC transporter integral membrane subunit K13895 yejE; microcin C transport system permease protein
D YPO1270 putative ABC transporter ATP-binding subunit K13896 yejF; microcin C transport system ATP-binding protein
D YPO3391 fhuD; ferrichrome-binding periplasmic protein precursor K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D YPO3390 fhuB; ferrichrome transport system permease protein FhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D YPO3392 fhuC; ferrichrome transport ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D YPO0281 hmuT; hemin-binding periplasmic protein K25132 hmuT; heme transport system substrate-binding protein
D YPO0280 hmuU; hemin transport system permease protein HmuU K25133 hmuU; heme transport system permease protein
D YPO0279 hmuV; hemin transport system ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D YPO0701 periplasmic binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D YPO1536 putative iron-siderophore transport system,periplasmic binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D YPO1535 putative iron-siderophore transport system,transmembrane component K23186 fepD; iron-siderophore transport system permease protein
D YPO1534 putative iron-siderophore transport system,membrane permease component K23187 fepG; iron-siderophore transport system permease protein
D YPO1533 putative iron-siderophore transport system,ATP-binding component K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D YPO4022 putative iron transport protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D YPO4024 putative iron transport permease K25283 yclO; iron-siderophore transport system permease protein
D YPO4023 putative iron transport permease K25284 yclN; iron-siderophore transport system permease protein
D YPO4025 putative iron ABC transporter, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D YPO1310 putative periplasmic substrate-binding transport protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YPO0955 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D YPO1311 putative FecCD-family membrane transport protein K02015 ABC.FEV.P; iron complex transport system permease protein
D YPO1344 FecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D YPO1345 putative transport ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D YPO1312 putative siderophore ABC transporter, ATP-binding subunit K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D YPO3385 btuF; putative priplasmic metal binding protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D YPO2425 btuC; puative vitamin B12 transport system permease protein K06073 btuC; vitamin B12 transport system permease protein
D YPO2423 btuD; putative vitamin B12 transport ATP-binding protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D YPO2061 znuA; exported high-affinity zinc uptake system protein K09815 znuA; zinc transport system substrate-binding protein
D YPO2059 znuB; high-affinity zinc uptake system membrane protein K09816 znuB; zinc transport system permease protein
D YPO2060 znuC; high-affinity zinc uptake system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D YPO2439 yfeA; periplasmic-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein
D YPO2441 yfeC; chelated iron transport system membrane protein K11605 sitC; manganese/iron transport system permease protein
D YPO2442 yfeD; chelated iron transport system membrane protein K11606 sitD; manganese/iron transport system permease protein
D YPO2440 yfeB; ATP-binding transport protein K11607 sitB; manganese/iron transport system ATP-binding protein
D YPO3440 putative membrane protein K07091 lptF; lipopolysaccharide export system permease protein
D YPO3439 putative membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D YPO3581 yhbG; probable ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D YPO1626 lolC; lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D YPO1628 lolE; lipoprotein releasing system, transmembrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D YPO1627 lolD; lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D YPO2737 ccmD; putative heme exporter protein D K02196 ccmD; heme exporter protein D
D YPO2736 ccmC; putative heme exporter protein C K02195 ccmC; heme exporter protein C
D YPO2735 ccmB; heme exporter protein B K02194 ccmB; heme exporter protein B
D YPO2734 ccmA; putative heme exporter protein A K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D YPO3812 ftsS; cell division protein K09811 ftsX; cell division transport system permease protein
D YPO3813 ftsE; cell division ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D YPO3405 yadH; putative ABC transporter, integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D YPO3406 yadG; putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D YPO1944 putative membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YPO3078 ybbP; putative permease K02004 ABC.CD.P; putative ABC transport system permease protein
D YPO1945 putative membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YPO1499 putative membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D YPO1497 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YPO1946 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YPO3079 ybbA; putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D YPO2402 putative ATP-dependent transporter K09013 sufC; Fe-S cluster assembly ATP-binding protein
D YPO2260 putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D YPO0759 Sodium:sulfate symporter-family protein K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D YPO2392 putative transport protein K26939 norM; MATE family, multidrug efflux pump
D YPO1571 yeeO; putative sugar transporter K26937 dinF; MATE family, multidrug efflux pump
D YPO0465 putative transport protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D YPO3016 nanT; putative sugar transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter
D YPO0577 exuT; ExuT transport protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D YPO0847 putative sugar transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D YPO1768 hpaX; putative 4-hydroxyphenylacetate permease K02511 hpaX; MFS transporter, ACS family, 4-hydroxyphenylacetate permease
D YPO1563 putative transmembrane transporter K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D YPO2904 hcaT; putative transport permease protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D YPO4007 uhpC; putative regulatory protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D YPO0792 ygeD; putative membrane protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D YPO3162 ampG; Beta-lactamase induction signal transducer AmpG K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D YPO2148 putative multidrug resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D YPO1267 bcr; probable drug resistance translocator protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D YPO4048 cmr; multidrug translocase K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D YPO2040 putative membrane protein K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D YPO0798 putative sugar transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D YPO3268 emrB; multidrug resistance protein B K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D YPO1712 putative transport protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D YPO2850 yegB; putative membrane protein K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein
D YPO3093 fsr; putative membrane efflux protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D YPO2266 putative membrane protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D YPO1668 yihN; putative membrane protein K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D YPO1380 putative membrane protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D YPO1915 irp8; putative signal transducer K05373 ybtX; MFS transporter, putative signal transducer
D YPO0163 conserved integral membrane protein K06141 tsgA; MFS transporter, TsgA protein
D YPO2459 putative transporter protein K08368 yaaU; MFS transporter, putative metabolite transport protein
D YPO2994 ptsI; PTS sytem, enzyme I component K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D YPO0785 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D YPO2993 hpr; PTS system, phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr
D YPO3587 npr; putative phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr
D YPO0405 putative phosphoenolpyruvate-protein phosphotransferase K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-]
D YPO1298 fpr; Similar to Salmonella typhimurium PTS system,fructose-specific IIa/FPr component FruB SW:PTFA_SALTY (P17127) (376 aa) fasta scores: E(): 0, 71.0% id in 376 aa,and to Escherichia coli PTS system, fructose-specific IIa/FPr component FruB SW:PTFA_ECOLI (P24217) (376 aa) fasta scores: E(): 0, 69.4% id in 376 aa K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D YPO2995 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D YPO1608 glcA; PTS system, glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D YPO0851 PTS transport protein (partial) K02778 ptsGb; glucose PTS system EIIB component [EC:2.7.1.199]
D YPO2628 nagE; pts system, N-acetylglucosamine-specific IIABC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D YPO3697 treB; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D YPO1300 fruA; PTS system, fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D YPO0402 PTS system, IIB component K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D YPO0403 PTS system, IIB component K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-]
D YPO0404 PTS system, IIC component K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component
D YPO4068 mtlA; PTS system, mannitol-specific IIABC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D YPO2680 celC; PTS system, cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D YPO2678 celA; PTS system, cellobiose-specific IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D YPO2679 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D YPO1758 gptB; PTS system, mannose-specific IIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D YPO1757 manY; PTS system, mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D YPO1756 gptB; PTS system, mannose-specific IID component K02796 manZ; mannose PTS system EIID component
D YPO0837 putative PTS permease protein K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D YPO0834 manX; putative PTS transport protein K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D YPO0835 putative PTS permease protein K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D YPO0836 putative PTS permease protein K02747 agaE; N-acetylgalactosamine PTS system EIID component
D YPO2569 phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D YPO2782 putative membrane protein K03475 ulaA; ascorbate PTS system EIIC component
D YPO3585 ptsN; nitrogen regulatory IIA protein K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D YPO0091 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D YPO2675 putative potassium channel protein K10716 kch; voltage-gated potassium channel
D YPO3142 amtB; probable ammonium transporter K03320 amt; ammonium transporter, Amt family
D YPO2367 gst; glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YPO1314 putative glutathione S-transferase-family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D YPO3561 pog; putative stringent starvation protein A K03599 sspA; stringent starvation protein A
D YPO3007 putative membrane protein K07114 yfbK; Ca-activated chloride channel homolog
D YPO1384 focA; putative formate transporter 1 K06212 focA; formate transporter
D YPO0159 nirC; putative nitrite transporter K02598 nirC; nitrite transporter
D YPO0238 mscL; mechanosensitive ion channel K03282 mscL; large conductance mechanosensitive channel
D YPO3129 aefA; putative potassium efflux system K05802 mscK; potassium-dependent mechanosensitive channel
D YPO0363 putative membrane transport protein K22051 mscM; miniconductance mechanosensitive channel
D YPO0919 putative membrane protein K03442 mscS; small conductance mechanosensitive channel
D YPO2470 putative membrane protein K16053 ybdG; miniconductance mechanosensitive channel
D YPO2839 mgtE; putative divalent cation transport protein K06213 mgtE; magnesium transporter
D YPO2672 putative urea transporter K08717 utp; urea transporter
D YPO1664 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D YPO0746 motA; putative flagellar motor transmembrane channel protein K02556 motA; chemotaxis protein MotA
D YPO1665 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D YPO0747 lafU; putative chemotaxis membrane protein K02557 motB; chemotaxis protein MotB
D YPO0682 MotA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D YPO0683 ExbD/TolR-family transport protein K03559 exbD; biopolymer transport protein ExbD
D YPO1121 tolQ; TolQ colicin import protein K03562 tolQ; biopolymer transport protein TolQ
D YPO1122 tolR; TolR colicin import membrane protein K03560 tolR; biopolymer transport protein TolR
D YPO3837 corA; magnesium and cobalt transport protein K03284 corA; magnesium transporter
D YPO2338 CorA-like Mg2+ transporter protein K16074 zntB; zinc transporter
D YPO2596 crcB; putative membrane protein K06199 crcB; fluoride exporter
D YPO2677 putative membrane protein K06199 crcB; fluoride exporter
D YPO2676 putative membrane protein K06199 crcB; fluoride exporter
D YPO3526 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YPO3298 b2612_b2613; putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YPO1411 ompF; Outer membrane porin protein F K09476 ompF; outer membrane pore protein F
D YPO1205 ompC2; outer membrane protein C2 K11929 phoE; outer membrane pore protein E
D YPO1222 ompC; outer membrane protein C, porin K09475 ompC; outer membrane pore protein C
D YPO3711 lamB; maltoporin K02024 lamB; maltoporin
D YPO0850 lamB; maltoporin K02024 lamB; maltoporin
D YPO1435 con; putative outer membrane porin A protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D YPO2506 omp4; putative outer membrane protein K11934 ompX; outer membrane protein X
D YPO2905 ail; attachment invasion locus protein K16078 ail; attachment invasion locus protein
D YPO2744 fadL; putative long-chain fatty acid transport protein K06076 fadL; long-chain fatty acid transport protein
D YPO1696 probable outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPO3879 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPO1709 htrE; putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPO1305 psaC; outer membrane usher protein PsaC precursor K07347 fimD; outer membrane usher protein
D YPMT1.83 YPMT1.83; putative F1 capsule anchoring protein K07347 fimD; outer membrane usher protein
D YPO1920 probable fimbrial usher protein K07347 fimD; outer membrane usher protein
D YPO1004 yapH; putative autotransporter protein K12678 aidA-I; autotransporter family porin
D YPO3910 putative vitamin B12 receptor protein K16092 btuB; vitamin B12 transporter
D YPO3922 hemophore HasA K12545 hasA; heme acquisition protein HasA
D YPO3923 putative TonB dependent receptor protein K16152 hasR; heme acquisition protein HasR
D YPO1906 fyuA; pesticin/yersiniabactin receptor protein K15721 fyuA; pesticin/yersiniabactin receptor
D YPO1537 putative iron-siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D YPO1313 putative outer membrane protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D YPO0283 hmuR; hemin receptor precursor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D YPO0956 putative hydroxamate-type ferrisiderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YPO0164 putative membrane receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YPO1753 fcuA; ferrichrome receptor protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YPO1011 putative TonB-dependent outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YPO0994 iutA; putative ferric siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D YPO0663 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPO3481 ibeB; probable outer membrane efflux lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D YPO1052 putative surface antigen K07277 SAM50; outer membrane protein insertion porin family
D YPO2876 yfgL; putative lipoprotein K17713 bamB; outer membrane protein assembly factor BamB
D YPO3061 dapX; lipoprotein K07287 bamC; outer membrane protein assembly factor BamC
D YPO3278 yfiO; putative lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D YPO1104 conserved hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE
D YPO3524 putative exported protein K07278 tamA; translocation and assembly module TamA
D YPO3523 putative exported protein K09800 tamB; translocation and assembly module TamB
D YPO3995 putative exported protein K22110 kdgM; oligogalacturonate-specific porin family protein
D YPO1718 putative exported protein K22110 kdgM; oligogalacturonate-specific porin family protein
D YPO3580 conserved hypothetical protein K09774 lptA; lipopolysaccharide export system protein LptA
D YPO3579 yrbK; putative exported protein K11719 lptC; lipopolysaccharide export system protein LptC
D YPO0495 b0054; organic solvent tolerance protein precursor K04744 lptD; LPS-assembly protein
D YPO2609 rlpB; rare lipoprotein B precursor K03643 lptE; LPS-assembly lipoprotein
D YPCD1.29c YPCD1.29c; putative Yop targeting protein K23475 yopB; transloator
D YPCD1.28c YPCD1.28c; putative Yop negative regulation/targeting component K23476 yopD; transloator
D YPO0337 putative exported protein K19298 subB; subtilase cytotoxin, subunit B
D YPO2617 ybeX; putative membrane protein K06189 corC; hemolysin (HlyC) family protein
D YPO1514 yohJ; putative membrane protein K06518 cidA; holin-like protein
D YPO1226 putative transport protein K16210 togT; oligogalacturonide transporter
D YPO1309 cadR; putative lysine-specific permease K11733 lysP; lysine-specific permease
D YPO3421 aroP; aromatic amino acid transport protein K11734 aroP; aromatic amino acid transport protein AroP
D YPO1743 aroP; aromatic amino acid transport protein K11734 aroP; aromatic amino acid transport protein AroP
D YPO3201 proY; probable proline-specific permease K11736 proY; proline-specific permease ProY
D YPO1859 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D YPO1937 ansP; L-asparagine permease K11738 ansP; L-asparagine permease
D YPO4015 amino acid permease K16234 hutT; histidine transporter
D YPO2306 putative amino acid antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D YPO1200 putative amino acid permease K03759 adiC; arginine:agmatine antiporter
D YPO0655 asoB; putative permease K16263 yjeH; amino acid efflux transporter
D YPO1129 putative cation transport protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D YPO0077 putative integral membrane protein K13283 fieF; ferrous-iron efflux pump FieF
D YPO3133 acrB; multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPO3482 multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPO1001 putative integral membrane efflux protein K18138 acrB; multidrug efflux pump
D YPO3043 multidrug efflux protein K18324 acrD; multidrug efflux pump
D YPO2848 yegN; AcrB/AcrD/AcrF family membrane protein K07788 mdtB; multidrug efflux pump
D YPO2849 yegO; AcrB/AcrD/AcrF family membrane protein K07789 mdtC; multidrug efflux pump
D YPO2333 qacE; quaternary ammonium compound-resistance protein K03297 emrE; small multidrug resistance pump
D YPO0355 sugE; putative chaperone K11741 sugE; quaternary ammonium compound-resistance protein SugE
D YPO2069 putative integral membrane protein K11742 mdtI; spermidine export protein MdtI
D YPO2068 putative integral membrane protein K11743 mdtJ; spermidine export protein MdtJ
D YPO2687 putative membrane protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D YPO2507 putative membrane protein K11939 rhtA; inner membrane transporter RhtA
D YPO0334 rhaT; L-rhamnose-proton symport protein K02856 rhaT; L-rhamnose-H+ transport protein
D YPO3836 rarD; putative membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D YPO2417 putative membrane protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D YPO0767 gntP; putative gluconate transporter K16321 gntP; high-affinity gluconate transporter
D YPO3954 gntM; putative gluconate permease K06155 gntT; Gnt-I system high-affinity gluconate transporter
D YPO3979 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D YPO0347 b4138; anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D YPO1168 betT; high-affinity choline transport protein K02168 betT; choline/glycine/proline betaine transport protein
D YPO1958 chaA; calcium/proton antiporter K07300 chaA; Ca2+:H+ antiporter
D YPO3576 yrbG; putative sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter
D YPO3967 phosphate transport protein K16322 pit; low-affinity inorganic phosphate transporter
D YPO3657 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D YPO1853 putP; proline permease K11928 putP; sodium/proline symporter
D YPO0251 putative transmembrane transport protein K14393 actP; cation/acetate symporter
D YPO0254 gltP; proton glutamate symport protein K11102 gltP; proton glutamate symport protein
D YPO3992 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D YPO0584 putative symporter protein K07862 sstT; serine/threonine transporter
D YPO0035 gltC; sodium/glutamate symport carrier protein K03312 gltS; glutamate:Na+ symporter, ESS family
D YPO0470 ant; sodium-proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D YPO2142 nhaB; Na+/H+ antiporter K03314 nhaB; Na+:H+ antiporter, NhaB family
D YPO3630 yjcE; putative putative Na(+)/H(+) exchanger protein K24163 nhaK; monovalent cation/hydrogen antiporter
D YPO0191 kefB; probable potassium-efflux system protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D YPO0190 conserved hypothetical protein K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D YPO3094 rosB; putative potassium antiporter K26735 KEA4_5_6; K+:H+ antiporter
D YPO3762 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D YPO0239 trkA; trk system potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein
D YPO0034 putative membrane permease K16345 xanP; xanthine permease XanP
D YPO3629 yjcD; putative xanthine/uracil permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D YPO4107 yieG; Xanthine/uracil permeases family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D YPO2983 cru; nucleoside permease K11535 nupC; nucleoside transport protein
D YPO1209 tyrP; tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein
D YPO1285 mtr; putative tryptophan-specific transport protein K03835 mtr; tryptophan-specific transport protein
D YPO1321 b2796; serine transporter K03837 sdaC; serine transporter
D YPO0277 putative transmembrane transport protein K26603 yhjV; inner membrane transport protein
D YPO3388 yadQ; putative chloride channel protein K03281 clcA; chloride channel protein, CIC family
D YPO2270 putative membrane protein K03281 clcA; chloride channel protein, CIC family
D YPO2673 putative nickel transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D YPO2982 mntH; manganese transport protein MntH K03322 mntH; manganese transport protein
D YPO3347 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D YPO3858 b3792; putative lipopolysaccharide biosynthesis protein K16693 wzxE; enterobacterial common antigen flippase
D YPO2043 mviN; putative membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D YPO2874 putative membrane protein K13936 mdcF; malonate transporter and related proteins
D YPO3791 putative membrane protein K13936 mdcF; malonate transporter and related proteins
D YPO0006 kup; potassium transport protein K03549 kup; KUP system potassium uptake protein
D YPO0918 yggA; putative LysE type translocator K06895 lysE; L-lysine exporter family protein LysE/ArgO
D YPO3831 rhtB; putative homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D YPO3832 rhtC; threonine efflux protein K05835 rhtC; threonine efflux protein
D YPO0483 putative LysE type translocator K05835 rhtC; threonine efflux protein
D YPO3264 putative amino acid transporter K26605 azlC; branched chain amino acid efflux pump
D YPO3265 putative membrane protein K26606 azlD; branched chain amino acid efflux pump
D YPO3686 yhcP; putative membrane protein K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D YPO0618 putative membrane protein K15547 mdtO; multidrug resistance protein MdtO
D YPO3068 perM; putative membrane protein K03548 perM; putative permease
D YPO3822 yhhQ; putative membrane protein K09125 yhhQ; queuosine precursor transporter
D YPO2437 marC; multiple antibiotic resistance protein K05595 marC; multiple antibiotic resistance protein
D YPO0554 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D YPO1754 yebN; putative membrane protein K23242 mntP; manganese efflux pump family protein
D YPO1941 putative membrane protein K07243 FTR; high-affinity iron transporter
D YPO1854 putative membrane protein K07243 FTR; high-affinity iron transporter
D YPO1855 putative exported protein K07224 efeO; iron uptake system component EfeO
D YPO1856 conserved hypothetical protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D YPO1942 putative exported protein K07230 p19; periplasmic iron binding protein
D YPO2901 putative membrane protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D YPO2193 tonB; TonB protein K03832 tonB; periplasmic protein TonB
D YPO3918 putative membrane protein K03832 tonB; periplasmic protein TonB
D YPO1125 excC; peptidoglycan-associated lipoprotein Pal K03640 pal; peptidoglycan-associated lipoprotein
D YPO1123 tolA; TolA colicin import membrane protein K03646 tolA; colicin import membrane protein
D YPO1124 tolB; TolB colicin import protein K03641 tolB; TolB protein
D YPO3325 dmsA; anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D YPO2965 dmsA; putative dimethyl sulfoxide reductase chain A protein K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D YPO3324 dmsB; anaerobic dimethyl sulfoxide reductase chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D YPO2966 dmsB; putative dimethyl sulfoxide reductase chain B protein K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D YPO3323 dmsC; anaerobic dimethyl sulfoxide reductase chain C K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D YPO2967 dmsC; putative dimethyl sulfoxide reductase chain C protein K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D YPO0794 bisC; putative biotin sulfoxide reductas2 K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-]
D YPO3267 emrA; multidrug resistance protein A K03543 emrA; membrane fusion protein, multidrug efflux system
D YPO0619 putative HlyD family secretion protein K15549 mdtN; membrane fusion protein, multidrug efflux system
D YPO3919 HlyD family secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D YPO0099 putative exported protein K13408 cvaA; membrane fusion protein
D YPO3483 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPO3132 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPO1144 putative membrane protein K25859 acrZ; accessory protein, multidrug efflux pump
D YPO2847 yegM; putitive HlyD family secretion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D YPO1364 putative HlyD family secretion protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D YPO2999 putative HlyD family secretion protein K13888 macA; membrane fusion protein, macrolide-specific efflux system
D YPO3685 yhcQ; putative HlyD family secretion protein K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D YPO1128 pnuC; intergral membrane NMN transport protein PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D YPO0133 feoA; hypothetical ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D YPO0132 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D YPO0131 conserved hypothetical protein K07490 feoC; ferrous iron transport protein C
D YPO3969 uspB; universal stress protein B K06144 uspB; universal stress protein B
D YPO2739 ccmF; putative cytochrome c-type biogenesis protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D YPO1660 mgtC; Mg(2+) transport ATPase protein C K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D YPO2332 putative membrane protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D YPO1785 putative copper resistance protein D K07245 pcoD; copper resistance protein D
D YPO1784 putative copper resistance protein K07156 copC; copper resistance protein C
D YPO2155 putative exported protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:ype02044]
D YPO0663 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPO2252 putative toxin transport protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D YPO3920 ABC transporter protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D YPO3919 HlyD family secretion protein K12537 hasE; membrane fusion protein, type I secretion system
D YPO0099 putative exported protein K13408 cvaA; membrane fusion protein
D YPO0817 general secretion pathway protein C K02452 gspC; general secretion pathway protein C
D YPO0816 general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D YPO0815 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D YPO0813 general secretion pathway protein G K02456 gspG; general secretion pathway protein G
D YPO0812 general secretion pathway protein H K02457 gspH; general secretion pathway protein H
D YPO0811 general secretion pathway protein I K02458 gspI; general secretion pathway protein I
D YPO0810 general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D YPO0809 general secretion pathway protein K K02460 gspK; general secretion pathway protein K
D YPO0808 general secretion pathway protein L K02461 gspL; general secretion pathway protein L
D YPO0806 prepilin peptidase K02464 gspO; general secretion pathway protein O [EC:3.4.23.43 2.1.1.-]
D YPO0805 putative lipoprotein K02465 gspS; general secretion pathway protein S
D YPO2881 putative fimbrial biogenesis protein K02656 pilF; type IV pilus assembly protein PilF
D YPO0940 conserved hypothetical protein K02669 pilT; twitching motility protein PilT
D YPO0695 putative membrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D YPO0694 putative membrane protein K02279 cpaB; pilus assembly protein CpaB
D YPO0691 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D YPO0690 putative type II secretion protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YPO0689 putative membrane protein K12510 tadB; tight adherence protein B
D YPO0688 putative exported protein K12511 tadC; tight adherence protein C
D YPO0687 conserved hypothetical protein K12512 tadD; tight adherence protein D
D YPO0686 putative membrane protein K12513 tadE; tight adherence protein E
D YPO0685 conserved hypothetical protein K12514 tadF; tight adherence protein F
D YPO0684 putative membrane protein K12515 tadG; tight adherence protein G
D YPO1015 putative prepilin peptidase dependent protein K02680 ppdB; prepilin peptidase dependent protein B
D YPO1017 putative prepilin peptidase dependent protein K02681 ppdC; prepilin peptidase dependent protein C
D YPO3425 ppdD; putative prepilin peptidase dependent protein D precursor K02682 ppdD; prepilin peptidase dependent protein D
D YPO3426 hofB; putative type II secretion system protein K02504 hofB; protein transport protein HofB
D YPO3427 hofC; putative type II secretion system protein K02505 hofC; protein transport protein HofC
D YPO0146 hypothetical protein K12288 hofM; pilus assembly protein HofM
D YPO0147 putative membrane protein K12289 hofN; pilus assembly protein HofN
D YPO0148 putative membrane protein K12290 hofO; pilus assembly protein HofO
D YPO0149 putative membrane protein K12291 hofP; pilus assembly protein HofP
D YPO0150 putative membrane transport protein K02507 hofQ; protein transport protein HofQ
D YPO0943 yggT; putative membrane protein K02221 yggT; YggT family protein
D YPO3152 ybaV; putative exported protein K02237 comEA; competence protein ComEA
D YPO1394 putative membrane protein K02238 comEC; competence protein ComEC
D YPCD1.52 YPCD1.52; putative type III secretion protein K03219 yscC; type III secretion protein C
D YPO0257 possible type III secretion protein K03219 yscC; type III secretion protein C
D YPCD1.53 YPCD1.53; putative type III secretion protein K03220 yscD; type III secretion protein D
D YPO0258 putative type-III secretion protein K03220 yscD; type III secretion protein D
D YPCD1.55 YPCD1.55; putative type III secretion protein K03221 yscF; type III secretion protein F
D YPO0260a putative type III secretion apparatus K03221 yscF; type III secretion protein F
D YPCD1.58 YPCD1.58; putative type III secretion protein K04053 yscI; type III secretion protein I
D YPCD1.59 YPCD1.59; putative type III secretion lipoprotein K03222 yscJ; type III secretion protein J
D YPO0263 type III secretion system apparatus lipoprotein K03222 yscJ; type III secretion protein J
D YPCD1.60 YPCD1.60; putative type III secretion protein K04054 yscK; type III secretion protein K
D YPCD1.61 YPCD1.61; putative type III secretion protein K03223 yscL; type III secretion protein L
D YPCD1.40 YPCD1.40; putative Yops secretion ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D YPO0267 putative type III secretion system ATP synthase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D YPCD1.41 YPCD1.41; putative type III secretion protein K04056 yscO; type III secretion protein O
D YPCD1.42 YPCD1.42; putative type III secretion protein K04057 yscP; type III secretion protein P
D YPCD1.43 YPCD1.43; putative type III secretion protein K03225 yscQ; type III secretion protein Q
D YPO0269 type III secretion system apparatus protein K03225 yscQ; type III secretion protein Q
D YPCD1.44 YPCD1.44; putative Yop secretion membrane protein K03226 yscR; type III secretion protein R
D YPO0270 putative type III secretion apparatus protein K03226 yscR; type III secretion protein R
D YPCD1.45 YPCD1.45; putative type III secretion protein K03227 yscS; type III secretion protein S
D YPO0271 putative type III secretion apparatus protein K03227 yscS; type III secretion protein S
D YPCD1.46 YPCD1.46; putative type III secretion protein K03228 yscT; type III secretion protein T
D YPO0272 putative type III secretion apparatus protein K03228 yscT; type III secretion protein T
D YPCD1.47 YPCD1.47; putative type III secretion protein K03229 yscU; type III secretion protein U
D YPO0273 putative type III secretion apparatus protein K03229 yscU; type III secretion protein U
D YPCD1.34c YPCD1.34c; putative membrane-bound Yop protein K03230 yscV; type III secretion protein V
D YPO0266 secretion system apparatus protein K03230 yscV; type III secretion protein V
D YPCD1.39c YPCD1.39c; putative membrane-bound Yop targeting protein K04058 yscW; type III secretion protein W
D YPCD1.36c YPCD1.36c; putative type III secretion protein K04059 yscX; type III secretion protein X
D YPCD1.50 YPCD1.50; hypothetical protein YPCD1.50 K04048 yscA; type III secretion protein A
D YPCD1.51 YPCD1.51; hypothetical protein YPCD1.51 K04049 yscB; type III secretion protein B
D YPCD1.54 YPCD1.54; putative type III secretion protein K04050 yscE; type III secretion protein E
D YPCD1.56 YPCD1.56; putative type III secretion protein K04051 yscG; type III secretion protein G
D YPCD1.57 YPCD1.57; putative type III secretion protein K04052 yscH; type III secretion protein H
D YPCD1.62 YPCD1.62; putative type III secretion regulatory protein K04055 yscM; type III secretion protein M
D YPCD1.35c YPCD1.35c; putative type III secretion protein K04060 yscY; type III secretion protein Y
D YPO1791 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D YPO1790 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D YPO0706 flhB; putative flagellar assembly protein K02401 flhB; flagellar biosynthesis protein FlhB
D YPO0714 fliF; putative flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D YPO1830 fla_AII.1; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D YPO0716 fliH; putative flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D YPO1828 fla_AII.3; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D YPO0717 fla; putative flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YPO1827 fla_AIII; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YPO1822 flaN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YPO0710 fliN; flagellar switch protein K02417 fliN; flagellar motor switch protein FliN
D YPO1821 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D YPO1820 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D YPO0709 fliP; putative flagellar assembly protein K02419 fliP; flagellar biosynthesis protein FliP
D YPO1820a fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D YPO0708 fliQ; putative flagellar assembly protein K02420 fliQ; flagellar biosynthesis protein FliQ
D YPO1819 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D YPO0707 fliR; putative flagellar assembly protein K02421 fliR; flagellar biosynthesis protein FliR
D YPO0891 dsbC; thiol:disulfide interchange protein (DsbC) K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D YPO1004 yapH; putative autotransporter protein K12678 aidA-I; autotransporter family porin
D YPO1387 putative exported protein K12342 yadB_C; adhesin YadB/C
D YPO1388 putative exported protein K12342 yadB_C; adhesin YadB/C
D YPO2044 putative hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YPO3720 hpmB; hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YPO3721 hemolysin K11016 shlA; hemolysin
D YPO2045 putative hemolysin K11016 shlA; hemolysin
D YPO2724 putative membrane protein K11891 impL; type VI secretion system protein ImpL
D YPO3603 putative exported protein K11891 impL; type VI secretion system protein ImpL
D YPO1482 putative membrane protein K11891 impL; type VI secretion system protein ImpL
D YPO0515 putative membrane protein K11891 impL; type VI secretion system protein ImpL
D YPO3598 putative membrane protein K11892 impK; type VI secretion system protein ImpK
D YPO0975 putative membrane protein K11892 impK; type VI secretion system protein ImpK
D YPO1468 putative membrane protein K11892 impK; type VI secretion system protein ImpK
D YPO0514 putative OmpA-family membrane protein K11892 impK; type VI secretion system protein ImpK
D YPO0976 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YPO1467 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YPO2934 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YPO3597 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YPO0513 conserved hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D YPO2948 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YPO3594 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YPO1486 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YPO0505 conserved hypothetical protein K11895 impH; type VI secretion system protein ImpH
D YPO1485 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG
D YPO2947 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG
D YPO0504 conserved hypothetical protein K11896 impG; type VI secretion system protein ImpG
D YPO2728 conserved hypothetical protein K11897 impF; type VI secretion system protein ImpF
D YPO0503 conserved hypothetical protein K11897 impF; type VI secretion system protein ImpF
D YPO2938 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YPO1466 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YPO3706 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YPO0977 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YPO0501 conserved hypothetical protein K11900 impC; type VI secretion system protein ImpC
D YPO2939 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YPO3707 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YPO0978 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YPO1465 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YPO0500 conserved hypothetical protein K11901 impB; type VI secretion system protein ImpB
D YPO2949 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D YPO0499 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D YPO3708 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPO1470 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPO2937 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPO0973 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPO0502 conserved hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D YPO0764 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO1472 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO0970 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO2725 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO3613 putative Rhs accessory genetic element K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO3606 putative Rhs accessory genetic element K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO0507 conserved hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D YPO3705 conserved hypothetical protein K11905 K11905; type VI secretion system protein
D YPO1488 conserved hypothetical protein K11905 K11905; type VI secretion system protein
D YPO3596 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D YPO1487 conserved hypothetical protein K11906 vasD; type VI secretion system protein VasD
D YPO2935 putative exported protein K11906 vasD; type VI secretion system protein VasD
D YPO0512 putative lipoprotein K11906 vasD; type VI secretion system protein VasD
D YPO1471 putative ATPase subunit of ATP-dependent protease K11907 vasG; type VI secretion system protein VasG
D YPO2946 clpB5; Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YPO3599 clpB2; Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YPO0506 clpB; putative Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YPO0971 clpB3; Clp ATPase K11907 vasG; type VI secretion system protein VasG
D YPO1483 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D YPO3602 conserved hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D YPO1489 hypothetical protein K11911 vasL; type VI secretion system protein VasL
D YPO3604 hypothetical protein K11911 vasL; type VI secretion system protein VasL
D YPO3595 conserved hypothetical protein K11894 impI; type VI secretion system protein ImpI
D YPO2727 conserved hypothetical protein K11898 impE; type VI secretion system protein ImpE
D YPO3601 conserved hypothetical protein K11909 vasI; type VI secretion system protein VasI
D YPO3877 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPO1922 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPO1710 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPO1707 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPO2945 frimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPO3878 putative fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D YPO1711 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPO1697 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPO1696 probable outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPO3879 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPO1709 htrE; putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPO1305 psaC; outer membrane usher protein PsaC precursor K07347 fimD; outer membrane usher protein
D YPMT1.83 YPMT1.83; putative F1 capsule anchoring protein K07347 fimD; outer membrane usher protein
D YPO1920 probable fimbrial usher protein K07347 fimD; outer membrane usher protein
D YPO1699 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPO1695 putative membrane protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPO1698 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPO1700 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPO0698 outer membrane usher protein K12518 papC; outer membrane usher protein PapC
D YPO0699 fimbrial chaperone protein K12519 papD; chaperone protein PapD
D YPO0564 azi; preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D YPO0067 secB; protein-export protein K03071 secB; preprotein translocase subunit SecB
D YPO3189 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D YPO3753 prlG; preprotein translocase SecE subunit K03073 secE; preprotein translocase subunit SecE
D YPO3188 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D YPO3499 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D YPO0563 putative exported protein K13301 secM; secretion monitor
D YPO0229 prlA; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D YPO3296 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D YPO3814 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D YPO3190 yajC; putative membrane protein K03210 yajC; preprotein translocase subunit YajC
D YPO4102 yidC; probable membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D YPO3778 b3836; Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA
D YPO3777 mtta2; Sec-independent protein translocase protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D YPO3776 mttB; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D YPO2597 tatE; sec-independent protein translocase protein K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:ype02042]
D YPO0337 putative exported protein K19298 subB; subtilase cytotoxin, subunit B
D YPO2279 putative phage-related membrane protein K10954 zot; zona occludens toxin
D YPO3673 putative insecticidal toxin K11021 tccC; insecticidal toxin complex protein TccC
D YPO3674 putative insecticidal toxin K11021 tccC; insecticidal toxin complex protein TccC
D YPO2312 putative insecticidal toxin complex K11021 tccC; insecticidal toxin complex protein TccC
D YPO2380 sepC; insecticial toxin K11021 tccC; insecticidal toxin complex protein TccC
D YPO3526 putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YPO3298 b2612_b2613; putative membrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D YPO3721 hemolysin K11016 shlA; hemolysin
D YPO2045 putative hemolysin K11016 shlA; hemolysin
D YPO2044 putative hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YPO3720 hpmB; hemolysin activator protein K11017 shlB; hemolysin activation/secretion protein
D YPO0900 putative hemolysin III K11068 hlyIII; hemolysin III
D YPMT1.74 YPMT1.74; murine toxin K11009 ymt; murine toxin
C 02022 Two-component system [BR:ype02022]
D YPO3204 nmpB; phosphate regulon sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D YPO3205 phoB; phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D YPO1633 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPO1634 phoP; response regulator protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YPO0137 envZ; osmolarity sensor protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D YPO0136 kmt; transcriptional regulatory protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D YPO2309 rstB; two-component regulatory system, sensor kinase protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D YPO2308 rstA; two-component regulatory system, response regulator protein K07661 rstA; two-component system, OmpR family, response regulator RstA
D YPO0073 cpxA; two component sensor kinase K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D YPO0074 cpxR; two component system response regulatory protein K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D YPO0895 creC; putative histidine kinase sensor K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D YPO0896 blrA; putative response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D YPO2853 baeR; two-component system response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D YPO3508 basS; two-component system sensor protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D YPO3507 basR; two-component system response regulator K07771 basR; two-component system, OmpR family, response regulator BasR
D YPO2000 putative two-component system sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YPO2001 copR; transcriptional activator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D YPO2689 kdpD; two-component regulatory protein sensor kinase KdpD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D YPO2688 kdpE; two-component regulatory protein response regulator KdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D YPO3555 arcB; aerobic respiration control sensor/response regulatory protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D YPO0458 arcA; aerobic respiration control protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D YPO2997 putative two-component system sensor kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D YPO2998 putative two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D YPO1959 narR; nitrate/nitrite sensor protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D YPO3041 narP; nitrate/nitrite response regulator protein NarP K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D YPO4012 uhpA; two-component system response regulator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D YPO1576 putative GerR-family transcriptional regulatory protein K20264 fusR; two-component system, NarL family, response regulator FusR
D YPO1217 rcsC; two component sensor kinase/response regulator protein RcsC K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D YPO1218 rcsB; probable two component response regulator component B K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D YPO3381 barA; two-component regulatory protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D YPO1865 uvrY; response regulator protein K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D YPO1925 putative two-component response regulator K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D YPO3943 putative membrane protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D YPO3287 two-component system response regulator K02477 K02477; two-component system, LytTR family, response regulator
D YPO0023 glnR; Two component regulatory protein involved in nitrogen assimilation K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D YPO0022 glnG; nitrogen regulation protein K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D YPO2916 two-component system sensor kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D YPO2914 two-component system response regulator K07715 glrR; two-component system, NtrC family, response regulator GlrR
D YPO1666 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YPO1680 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YPO1679 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YPO0256 two-component sensor/regulator K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D YPO0255 putative two-component response regulator K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D YPO2173 probable response regulator K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:ype02035]
D YPO1666 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D YPO1667 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D YPO1678 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D YPO1679 cheB; protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D YPO1680 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D YPO1681 cheZ; chemotaxis protein CheZ K03414 cheZ; chemotaxis protein CheZ
D YPO2515 putative chemotactic transducer K03406 mcp; methyl-accepting chemotaxis protein
D YPO1229 cheD2; putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D YPO1675 cheD; methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YPO0802 cheD; putative methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D YPO4062 cheM; methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D YPO1644 aer; putative methyl-accepting chemotaxis protein K03776 aer; aerotaxis receptor
D YPO0716 fliH; putative flagellar assembly protein K02411 fliH; flagellar assembly protein FliH
D YPO1828 fla_AII.3; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D YPO0717 fla; putative flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YPO1827 fla_AIII; flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D YPO1826 flaO; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D YPO1821 fliO; flagellar protein FliO K02418 fliO; flagellar protein FliO/FliZ
D YPO1820 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D YPO0709 fliP; putative flagellar assembly protein K02419 fliP; flagellar biosynthesis protein FliP
D YPO1820a fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D YPO0708 fliQ; putative flagellar assembly protein K02420 fliQ; flagellar biosynthesis protein FliQ
D YPO1819 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D YPO0707 fliR; putative flagellar assembly protein K02421 fliR; flagellar biosynthesis protein FliR
D YPO1791 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D YPO1790 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D YPO0706 flhB; putative flagellar assembly protein K02401 flhB; flagellar biosynthesis protein FlhB
D YPO1792 flhE; flagellar protein FlhE precursor K03516 flhE; flagellar protein FlhE
D YPO0715 fla; puative flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D YPO1829 fla_AII.2; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D YPO1823 CheC2; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D YPO0711 fliM; putative flagellar motor switch protein K02416 fliM; flagellar motor switch protein FliM
D YPO1822 flaN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D YPO0710 fliN; flagellar switch protein K02417 fliN; flagellar motor switch protein FliN
D YPO0714 fliF; putative flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D YPO1830 fla_AII.1; flagellar M-ring protein K02409 fliF; flagellar M-ring protein FliF
D YPO1806 fla_FIX; flagellar P-ring protein precursor K02394 flgI; flagellar P-ring protein FlgI
D YPO0730 flgI; putative flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D YPO1798 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YPO0721 flgA; putative flagella basal body P-ring formation protein K02386 flgA; flagellar basal body P-ring formation protein FlgA
D YPO1805 fla_FVIII; flagellar L-ring protein precursor K02393 flgH; flagellar L-ring protein FlgH
D YPO0729 flgH; putative flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D YPO1824 cheC1; flagellar protein FliL K02415 fliL; flagellar protein FliL
D YPO0744 putative flagellar biogenesis protein K02415 fliL; flagellar protein FliL
D YPO0713 fliE; putative flagellar hook-basal body complex protein K02408 fliE; flagellar hook-basal body complex protein FliE
D YPO1831 fla_AI; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D YPO1825 fliK; flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK
D YPO0743 putative flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D YPO1799 fla_FII; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D YPO0722 flgB; putative flagellar basal-body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D YPO1800 fla_FIII; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D YPO0723 flgC; putative flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D YPO1801 Fla_FIV; basal-body rod modification protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD
D YPO0724 flgD; putative basal-body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D YPO1803 fla_FVI; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D YPO1804 fla_FVII; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D YPO0728 flgG; putative flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D YPO1807 fla_FX; flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D YPO0731 flgJ; putative flagellar protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D YPO1802 Fla_FV; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D YPO0725 flgE; putative flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D YPO1808 flaS; flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D YPO0732 flgK; putative flagellar hook-associated protein K02396 flgK; flagellar hook-associated protein 1
D YPO1809 flaT; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D YPO0733 flgL; putative flagellar hook-associated protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D YPO1796 flgN; flagella synthesis protein FlgN K02399 flgN; flagellar biosynthesis protein FlgN
D YPO0719 hypothetical protein K02399 flgN; flagellar biosynthesis protein FlgN
D YPO0737 flaA1; putative flagellin K02406 fliC; flagellin
D YPO0738 flaA2; putative flagellin K02406 fliC; flagellin
D YPO0739 flaA3; putative flagellin K02406 fliC; flagellin
D YPO1842 flaF; thermoregulated motility protein K02406 fliC; flagellin
D YPO0740 fliD; putative flagellar hook-associated protein K02407 fliD; flagellar hook-associated protein 2
D YPO1841 flaV; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D YPO0741 fliS; putative flagellar protein K02422 fliS; flagellar secretion chaperone FliS
D YPO1840 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D YPO1839 fliT; FliT K02423 fliT; flagellar protein FliT
D YPO1663 flhC; flagellum biosynthesis transcription activator K02402 flhC; flagellar transcriptional activator FlhC
D YPO0745 fliA; putative RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YPO1843 flaD; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D YPO1664 motA; chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D YPO0746 motA; putative flagellar motor transmembrane channel protein K02556 motA; chemotaxis protein MotA
D YPO1665 motB; chemotaxis MotB protein K02557 motB; chemotaxis protein MotB
D YPO0747 lafU; putative chemotaxis membrane protein K02557 motB; chemotaxis protein MotB
D YPO1846 fliY; putative cystine-binding periplasmic protein K02424 tcyA; L-cystine transport system substrate-binding protein
D YPO1844 fliZ; putative alternative sigma factor regulatory protein K02425 fliZ; regulator of sigma S factor FliZ
D YPO1797 flgM; negative regulator of flagellin synthesis K02398 flgM; negative regulator of flagellin synthesis FlgM
D YPO0720 putative flagellar regulatory protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D YPO0940 conserved hypothetical protein K02669 pilT; twitching motility protein PilT
D YPO2881 putative fimbrial biogenesis protein K02656 pilF; type IV pilus assembly protein PilF
D YPO0695 putative membrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D YPO0694 putative membrane protein K02279 cpaB; pilus assembly protein CpaB
D YPO0691 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D YPO0690 putative type II secretion protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D YPO3877 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPO1922 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPO1710 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPO1707 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPO2945 frimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D YPO3878 putative fimbrial chaperone K07346 fimC; fimbrial chaperone protein
D YPO1711 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPO1697 putative chaperone protein K07346 fimC; fimbrial chaperone protein
D YPO1696 probable outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPO3879 putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPO1709 htrE; putative outer membrane usher protein K07347 fimD; outer membrane usher protein
D YPO1305 psaC; outer membrane usher protein PsaC precursor K07347 fimD; outer membrane usher protein
D YPMT1.83 YPMT1.83; putative F1 capsule anchoring protein K07347 fimD; outer membrane usher protein
D YPO1920 probable fimbrial usher protein K07347 fimD; outer membrane usher protein
D YPO1699 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPO1695 putative membrane protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPO1698 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D YPO1700 putative exported protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ype04812]
D YPO3665 envB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D YPO0560 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YPO0559 divA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D YPO2078 minC; cell division inhibitor K03610 minC; septum site-determining protein MinC
D YPO2077 minD; septum site-determining protein K03609 minD; septum site-determining protein MinD
D YPO2076 minE; cell division topological specificity factor K03608 minE; cell division topological specificity factor
D YPCD1.13c YPCD1.13c; putative plasmid partitioning transcription repressor K03496 parA; chromosome partitioning protein
D YPMT1.68c YPMT1.68c; putative partitioning protein A K03496 parA; chromosome partitioning protein
D YPMT1.59c YPMT1.59c; putative DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPMT1.67c YPMT1.67c; putative partitioning protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D YPCD1.12c YPCD1.12c; putative plasmid partitioning control protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ype04147]
D YPO3119 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D YPO3376 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D YPO2157 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D YPO0921 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D YPO2064 pykA; pyruvate kinase II K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPO2393 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D YPO0167 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D YPO3194 ahpC; putative alkyl hydroperoxide reductase subunit c K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D YPO0351 crpA; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D YPO0468 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D YPO3718 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D YPO2871 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D YPO3754 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D YPO0203 tufA; elongation factor Tu K02358 tuf; elongation factor Tu
D YPO1611 conserved hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D YPO2260 putative membrane protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D YPO0537 putative AMP-binding enzyme-family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPO2074 fadD; long-chain-fatty-acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D YPO3118 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D YPO4019 putative phosphoribosyl transferase protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YPO3123 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D YPO3924 argH; putative argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D YPO1570 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D YPO1193 putative pyridoxal-dependent decarboxylase K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D YPO3520 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D YPO1137 galA; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D YPO3942 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D YPO3312 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D YPO0024 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D YPO3771 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D YPO2298 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D YPO1288 putative D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPO0914 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D YPO3728 purH; bifunctional purine biosynthesis protein PurH [includes: phosphoribosylaminoimidazolecarboxamide formyltransferase and IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D YPO3917 putative pyridine nucleotide-disulphide oxidoreductase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO3417 lpd; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D YPO2066 zwf; glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D YPO0085 tpi; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D YPO1133 gpm; phosphoglycerate mutase 1 K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ype02048]
D YPO2468 conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1
D YPO2467 conserved hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D YPO2465 conserved hypothetical protein K19127 csy1; CRISPR-associated protein Csy1
D YPO2464 conserved hypothetical protein K19128 csy2; CRISPR-associated protein Csy2
D YPO2463 conserved hypothetical protein K19129 csy3; CRISPR-associated protein Csy3
D YPO2462 conserved hypothetical protein K19130 csy4; CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
D YPO0154 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPO2088 putative methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D YPMT1.64c YPMT1.64c; putative DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D YPO0387 hypothetical protein K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D YPO0388 conserved hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D YPO3628 putative DNA-damage-inducible protein K07473 dinJ; DNA-damage-inducible protein J
D YPO2973 hypothetical protein K18843 hicB; antitoxin HicB
D YPO3138 ymoA; modulating protein YmoA (histone-like protein) K05839 hha; haemolysin expression modulating protein
D YPO3137 conserved hypothetical protein K19162 tomB; hha toxicity modulator TomB
D YPO2349 pspC; phage shock protein C K03973 pspC; phage shock protein C
D YPO2350 pspB; phage shock protein B K03970 pspB; phage shock protein B
D YPCD1.08c YPCD1.08c; hypothetical protein YPCD1.08c K19092 parE1_3_4; toxin ParE1/3/4
D YPCD1.09c YPCD1.09c; hypothetical protein YPCD1.09c K07746 parD1_3_4; antitoxin ParD1/3/4
D YPO1833 conserved hypothetical protein K07341 doc; death on curing protein
D YPO0882 conserved hypothetical protein K13651 mqsR; motility quorum-sensing regulator / GCU-specific mRNA interferase toxin
D YPO0881 conserved hypothetical protein K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D YPO3447 conserved hypothetical protein K19334 tabA; biofilm protein TabA
D YPO0560 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D YPO3665 envB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D YPO0671 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D YPO0668 nfxD; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D YPO2984 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D YPO0896a conserved hypothetical protein K19168 cptA; toxin CptA
D YPO0897 conserved hypothetical protein K09159 cptB; antitoxin CptB
D YPO2896 iscS; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D YPO2138 putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:ype04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:ype04090]
C 01504 Antimicrobial resistance genes [BR:ype01504]
D YPO4048 cmr; multidrug translocase K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D YPO2000 putative two-component system sensor protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D YPO2001 copR; transcriptional activator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D YPO1633 phoQ; sensor protein kinase K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D YPO1634 phoP; response regulator protein K07660 phoP; two-component system, OmpR family, response regulator PhoP
D YPO3483 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPO3132 acrA; multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system
D YPO3133 acrB; multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPO3482 multidrug efflux protein K18138 acrB; multidrug efflux pump
D YPO1001 putative integral membrane efflux protein K18138 acrB; multidrug efflux pump
D YPO3481 ibeB; probable outer membrane efflux lipoprotein K18139 oprM; outer membrane protein, multidrug efflux system
D YPO3085 cueR; putative regulatory protein K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D YPO0663 hasF; ABC-transporter outer membrane component K12340 tolC; outer membrane protein
D YPO1411 ompF; Outer membrane porin protein F K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:ype00536]
D YPO2490 putative hemolysin K15125 fhaB; filamentous hemagglutinin
D YPO0599 putative adhesin K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ype00537]
D YPO2298 phoA; alkaline phosphatase precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:ype03200]
D YPO2099 rzpR; putative prophage endopeptidase K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ype03100]
D tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-5 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D tRNA-Arg-2 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-2 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asn-3 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Asp-3 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D tRNA-Cys tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Gln-2 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-2 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Glu-3 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-4 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D tRNA-His tRNA-His K14226 tRNA-His; tRNA His
D tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Ile-3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D tRNA-Leu-5 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-6 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-4 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Lys-3 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-4 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-5 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Met-6 tRNA-Met K14230 tRNA-Met; tRNA Met
D tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Phe-2 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-2 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Pro-3 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-5 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Ser-4 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D tRNA-Thr-3 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Thr-4 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D tRNA-Trp tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Tyr-2 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-4 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-5 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D tRNA-Sec tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D 16S_rRNA-4 16S_rRNA; match to 16S_rRNA 1..1489 (EMBL:YPE16SA) K01977 16SrRNA; 16S ribosomal RNA
D 16S_rRNA-6 16S_rRNA; match to 16S_rRNA 1..1489 (EMBL:YPE16SA) K01977 16SrRNA; 16S ribosomal RNA
D 23S_rRNA-6 23S_rRNA; match to 23S_rRNA 1..2906 (Y. enterocolitica 23S EMBL:U77925) K01980 23SrRNA; 23S ribosomal RNA
D 23S_rRNA-5 23S_rRNA; match to 23S_rRNA 1..2906 (Y. enterocolitica 23S EMBL:U77925) K01980 23SrRNA; 23S ribosomal RNA
D 5S_rRNA-4 5S_rRNA; partial 5SrRNA lacking the first 100 bases. K01985 5SrRNA; 5S ribosomal RNA
D ffs ffs; Similar to Escherichia coli 4.5S RNA, ffs, 85% identity in 103 nt overlap K01983 ffs; SRP RNA
D rnpB rnpB; Similar to Escherichia coli RNase P, RNA component involved in tRNA and 4.5S RNA-processing, rnpB, 92% identity in 347 nt overlap K01978 rnpB; M1 RNA
D ssrA ssrA; Similar to Escherichia coli small stable RNA molecule, tmRNA [10Sa RNA] (D12501), 91% identity in 333 nt overlap K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D YPO2539 idnO; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D YPO0676 putative aldo/keto reductase family protein K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D YPO2805 putative aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D YPO1075 putative aldo/keto reductase K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346]
D YPO2238 conserved hypothetical protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D YPO1556 putative dehydrogenase K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D YPO2980 putative ion channel protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D YPO2502 gutB; putative zinc-binding dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D YPO3352 ydjJ; putative Zinc-binding dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D YPO0308 putative oxidoreductase K26080 E1.1.3.29; N-acylhexosamine oxidase [EC:1.1.3.29]
D YPO2461 putative oxidoreductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D YPO0589 fadH; 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D YPO2448 solA; putative sarcosine oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D YPO0319 b4051; quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D YPO0670 mda66; putative modulator of drug activity K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D YPO2323 acpD; acyl carrier protein phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D YPO3525 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D YPO2158 conserved hypothetical protein K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D YPO3639 yghU; putative glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D YPO3662 conserved hypothetical protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D YPO3321 cybB; probable cytochrome B561 K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D YPO3342 yhjA; putative cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D YPO3064 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D YPO2342 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D YPO3025 conserved hypothetical protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D YPO3956 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D YPO2149 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D YPO2908 fsrB; flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D YPO2493 putative dioxygenase alpha subunit K22443 cntA; carnitine monooxygenase subunit [EC:1.14.13.239]
D YPO2492 putative dioxygenase beta subunit K22444 cntB; carnitine monooxygenase subunit [EC:1.14.13.239]
D YPO1530 alcA; putative siderophore biosynthetic enzyme K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D YPO1783 ftn; ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D YPO3409 yacK; putative exported protein K14588 cueO; cuproxidase [EC:1.16.3.4]
D YPO0088 fpr; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D YPO3070 yfgD; putative arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D YPO3455 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D YPO1381 act; pyruvate formate-lyase 1 activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D YPO1359 hcr; putative oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D YPO3357 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D YPO2390 cdfA; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D YPO2509 tam; puative trans-aconitate methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144]
D YPO1949 tehB; putative tellurite resistance protein K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D YPO0286 putative coproporphyrinogen III oxidase K21936 chuW; anaerobilin synthase [EC:2.1.1.342]
D YPO2616 cutE; putative apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D YPO3476 putative acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D YPO4075 putative acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D YPO3444 putative acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D YPO3874 putative exported protein K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D YPO1371 aat; putative leucyl/phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D YPO0610 hypothetical protein K21298 E2.4.1.333; 1,2-beta-oligoglucan phosphorylase [EC:2.4.1.333]
D YPO2474 conserved hypothetical protein K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340]
D YPO3271 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D YPO0784 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D YPO3234 apbE; thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D YPO1235 conserved hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D YPO2410 Conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D YPO0653 glnE; glutamate-ammonia-ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D YPO3724 aceK; isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D YPO1120 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D YPO2211 trpH; conserved hypothetical protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D YPO2748 sixA; putative phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D YPO1274 putative membrane protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D YPO3996 yhjK; putative membrane protein K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D YPO0829 putative sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D YPO0842 putative sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D YPO3047 ydeN; putative sulfatase K01138 K01138; uncharacterized sulfatase [EC:3.1.6.-]
D YPO0933 endA; endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D YPO1607 putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D YPO0434 putative metalloenzyme K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D YPO2638 conserved hypothetical protein K01175 ybfF; esterase [EC:3.1.-.-]
D YPO3224 conserved hypothetical protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D YPO2098 putative phage lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D YPO0853 putative galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D YPO1683 probable N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D YPO0242 def; polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D YPO1573 putative polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D YPO2682 conserved hypothetical protein K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105]
D YPO1778 conserved hypothetical protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D YPO3590 conserved hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D YPO0652 conserved hypothetical protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D YPO3148 putative haloacid dehalogenase-like hydrolase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D YPO3035 conserved hypothetical protein K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D YPO1593 conserved hypothetical protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D YPO0005 conserved hypothetical protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D YPO1236 putative class II aldolase-family protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D YPO2232 mipB; putative transaldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D YPO0368 conserved hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D YPO0824 putative exported protein K08961 K08961; chondroitin-sulfate-ABC endolyase/exolyase [EC:4.2.2.20 4.2.2.21]
D YPO1028 putative aminotransferase class V K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D YPO1858 putative exported protein K17948 nanM; N-acetylneuraminate epimerase [EC:5.1.3.24]
D YPO0326 conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D YPO1238 conserved hypothetical protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D YPO3519 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-m e so-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D YPO2242 putative integral membrane protein K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D YPO2244 putative iron-sulfur binding NADH dehydrogenase K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D YPO2245 putative iron-sulfur protein K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D YPO3240 nqr1; NADH-ubiquinone oxidoreductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D YPO3239 nqr2; NADH-ubiquinone oxidoreductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D YPO3238 nqr3; Na+-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D YPO3237 nqr4; Na+-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D YPO3236 nqr5; Na+-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D YPO1935 putative Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D YPO3235 nqr6; NADH-uniquinone oxidoreductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D YPO3820 putative P-type cation-translocating membrane ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D YPO1661 mgtB; Mg(2+) transport ATPase protein B K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D YPO3396 sfs1; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D YPO4060 fdhD; putative formate dehydrogenase K02379 fdhD; FdhD protein
D YPO2891 fdx; adrenodoxin family ferredoxin K04755 fdx; ferredoxin, 2Fe-2S
D YPO1212 putative iron-sulphur binding protein K11107 yfaE; ferredoxin
D YPO2241 putative exported protein K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D YPO2240 putative membrane protein K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D YPO2246 putative membrane protein K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D YPO0343 hydN; 4Fe-4S ferrodoxin K05796 hydN; electron transport protein HydN
D YPO0001 putative flavoprotein K06205 mioC; MioC protein
D YPO0893 fldB; flavodoxin 2 K03840 fldB; flavodoxin II
D YPO2895 nifU; NifU family protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D YPO3694 putative cytochrome K15536 cybC; soluble cytochrome b562
D YPO3320 cybC; putative cytochrome B562 K15536 cybC; soluble cytochrome b562
D YPO3039 napD; conserved hypothetical protein K02570 napD; periplasmic nitrate reductase NapD
D YPO3040 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D YPO2635 fldA; flavodoxin 1 K03839 fldA; flavodoxin I
D YPO3036 napC; cytochrome C-type protein NapC K02569 napC; cytochrome c-type protein NapC
C 99983 Lipid metabolism
D YPO0383 aidB; putative acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D YPO2650 nrdI; NrdI protein homologue K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D YPO2991 cysZ; putative membrane protein K06203 cysZ; CysZ protein
D YPO1061 conserved hypothetical protein K08234 yaeR; glyoxylase I family protein
D YPO2340 conserved hypothetical protein K14054 mpaA; murein peptide amidase A
D YPO0941 conserved hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D YPO2224 putative membrane protein K08992 lapA; lipopolysaccharide assembly protein A
D YPO2225 conserved hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
D YPO1382 hypothetical protein K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D YPO3852 hemY; putative protoheme IX biogenesis protein K02498 hemY; HemY protein
D YPO3779 aarF; ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
D YPO3780 conserved hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D YPO0656 conserved hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D YPO3477 putative lipid carrier protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D YPO0012 mobB; probable molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D YPO1008 putative integral membrane efflux protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D YPO0673 sufI; putative cell division protein K04753 sufI; suppressor of ftsI
C 99999 Others
D YPO0568 putative membrane protein K15977 K15977; putative oxidoreductase
D YPO3272 yfiQ; putative acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D YPO3690 putative ribonuclease inhibitor K03623 yhcO; ribonuclease inhibitor
D YPO1366 cspD; cold shock-like protein K03704 cspA; cold shock protein
D YPO1398 cspB; cold shock-like protein K03704 cspA; cold shock protein
D YPO1655 cspC; cold shock protein K03704 cspA; cold shock protein
D YPO1746 cspC; cold shock protein K03704 cspA; cold shock protein
D YPO2595 cspE; putative cold shock protein K03704 cspA; cold shock protein
D YPO2659 cspB; cold shock protein K03704 cspA; cold shock protein
D YPO3643 cspa2; major cold shock protein Cspa2 K03704 cspA; cold shock protein
D YPO3644 cspa1; major cold shock protein Cspa1 K03704 cspA; cold shock protein
D YPO3737 rsd; regulator of sigma D K07740 rsd; regulator of sigma D
D YPO3143 glnK; nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2
D YPO0134 conserved hypothetical protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D YPO2330 hslJ; putative heat shock protein K03668 hslJ; heat shock protein HslJ
D YPO1367 conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D YPO3158 tig; Trigger factor K03545 tig; trigger factor
D YPO3661 putative membrane protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D YPO4055 fdhE; putative formate dehydrogenase formation protein K02380 fdhE; FdhE protein
D YPO2668 ureE; urease accessory protein K03187 ureE; urease accessory protein
D YPO2669 ureF; urease accessory protein K03188 ureF; urease accessory protein
D YPO2670 ureG; urease accessory protein K03189 ureG; urease accessory protein
D YPO1101 b2620; SsrA-binding protein (small protein B) K03664 smpB; SsrA-binding protein
D YPO2651 nrdH; putative glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D YPO3902 putative magnesium chelatase family protein K07391 comM; magnesium chelatase family protein
D YPO0630 conserved hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D YPO0801 conserved hypothetical protein K07396 K07396; putative protein-disulfide isomerase
D YPO0176 conserved hypothetical protein K07397 yhfA; putative redox protein
D YPO0127 conserved hypothetical protein K07400 nfuA; Fe/S biogenesis protein NfuA
D YPO0259 putative type III secretion apparatus K18984 ssaE; secretion system chaperone SsaE
C 99976 Replication and repair
D YPO3139 putative 6-O-methylguanine DNA methyltransferase family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D YPO1032 exo; exodeoxyribonuclease IX K01146 xni; protein Xni
D YPO0049 radC; putative DNA repair protein K03630 radC; DNA repair protein RadC
D YPO3782 rumC; putative DNA recombination protein K09760 rmuC; DNA recombination protein RmuC
D YPO1362 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D YPO3549 conserved hypothetical protein K07460 yraN; putative endonuclease
D YPO3475 conserved hypothetical protein K07461 K07461; putative endonuclease
D YPO0243 conserved hypothetical protein K04096 smf; DNA processing protein
D YPO1378 putative ATPase protein K07478 ycaJ; putative ATPase
D YPO0245 putative DNA-binding protein K07479 yrdD; putative DNA topoisomerase
D YPO0880 putative primase K06919 K06919; putative DNA primase/helicase
D YPO0963 insB; insertion sequence protein K07480 insB; insertion element IS1 protein InsB
D YPO0967a insertion sequence protein (partial) K07480 insB; insertion element IS1 protein InsB
D YPCD1.16c YPCD1.16c; hypothetical protein YPCD1.16c K07483 K07483; transposase
D YPO0119 insertion element DNA-binding protein K07483 K07483; transposase
D YPO0755 insertion element DNA-binding protein K07483 K07483; transposase
D YPO0996 insertion element IS1661 DNA-binding protein K07483 K07483; transposase
D YPO3492 insertion element IS1661 DNA-binding protein K07483 K07483; transposase
D YPO3931 insertion element IS1661 DNA-binding protein K07483 K07483; transposase
D YPO4046 insertion element IS1661 DNA-binding protein K07483 K07483; transposase
D YPO4091 insertion element IS1661 DNA-binding protein K07483 K07483; transposase
D YPCD1.83c YPCD1.83c; hypothetical protein YPCD1.83c K07483 K07483; transposase
D YPMT1.79c YPMT1.79c; putative transposase K07486 K07486; transposase
D YPO0964 insA; insertion sequence protein K07489 K07489; transposase
D YPO0968 insA; insertion sequence protein K07489 K07489; transposase
D YPO0981 insA; insertion element protein K07489 K07489; transposase
D YPMT1.37c YPMT1.37c; putative transposase K07491 rayT; REP-associated tyrosine transposase
D YPO0018 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0094 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0204 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0300 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0356 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0479 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0487 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0534 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0541 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0583 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0696 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0697 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0726 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO0925 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1036 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1099 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1164 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1173 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1223 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1263 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1369 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1406 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1424 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1434 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1521 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1592 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1602 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1609 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO1794 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2023 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2033 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2121 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2311 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2343 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2353 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2395 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2629 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2764 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2826 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2869 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2900 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2917 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2928 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2985 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO2996 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3060 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3072 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3178 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3187 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3195 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3280 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3291 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3299 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3329 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3416 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3433 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3535 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3567 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3642 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3745 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3764 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3810 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3853 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPO3968 tnp; transposase for the IS1541 insertion element K07491 rayT; REP-associated tyrosine transposase
D YPMT1.80c YPMT1.80c; putative transposase K07493 K07493; putative transposase
D YPO0011 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO1493 y1062; transposase K07493 K07493; putative transposase
D YPO1561 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO1583 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO1589 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO1621 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO1727 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO1988 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO2104 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO2136 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO2170 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO2194 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO2447 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO2571 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO2656 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO2783 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO2799 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO2862 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO2942 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO3875 y1062; transposase for the IS285 insertion element K07493 K07493; putative transposase
D YPO2009 putative integrase core domain protein K07497 K07497; putative transposase
D YPO2640 trp1400A; IS1400 transposase A K07497 K07497; putative transposase
D YPO3491 transposase for insertion sequence IS1661 K07497 K07497; putative transposase
D YPO3703 transposase for insertion sequence IS1661 K07497 K07497; putative transposase
D YPO3932 transposase for insertion sequence IS1661 K07497 K07497; putative transposase
D YPO4047 transposase for insertion sequence IS1661 K07497 K07497; putative transposase
D YPO4092 transposase for insertion sequence IS1661 K07497 K07497; putative transposase
D YPCD1.15c YPCD1.15c; hypothetical protein YPCD1.15c K07497 K07497; putative transposase
D YPCD1.63 YPCD1.63; putative transposase ORFA K07497 K07497; putative transposase
D YPCD1.65 YPCD1.65; putative transposase K07497 K07497; putative transposase
D YPCD1.93 YPCD1.93; putative transposase K07497 K07497; putative transposase
D YPCD1.94 YPCD1.94; putative transposase K07497 K07497; putative transposase
D YPO0118 transposase for insertion sequence IS1661 K07497 K07497; putative transposase
D YPO0756 transposase for insertion sequence IS1661 K07497 K07497; putative transposase
D YPO0997 transposase for insertion sequence IS1661 K07497 K07497; putative transposase
D YPO1873 tnpA; putative transposase K07497 K07497; putative transposase
D YPCD1.64 YPCD1.64; putative transposase ORFB K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D YPO2351 pspA; phage shock protein A K03969 pspA; phage shock protein A
D YPO3121 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D YPO3854 putative permease protein K03293 TC.AAT; amino acid transporter, AAT family
D YPO2494 putative BCCT-family transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D YPO2361 putative proton dependent peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D YPO3002 putative permease K03307 TC.SSS; solute:Na+ symporter, SSS family
D YPO3202 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D YPO1083 putative permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D YPO0435 putative Na+ dependent nucleoside transporter-family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D YPO0081 putative membrane transport protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
D YPO1326 TrkA, Potassium channel-family protein K07085 K07085; putative transport protein
D YPO4083 yidE; putative membrane protein K07085 K07085; putative transport protein
C 99978 Cell growth
D YPO2196 ispA; putative intracellular septation protein K06190 ispZ; intracellular septation protein
D YPO3823 dcrB; putative lipoprotein K27311 dcrB; inner membrane lipoprotein DcrB
D YPO3531 conserved hypothetical protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D YPO2145 conserved hypothetical protein K06415 spoVR; stage V sporulation protein R
D YPO0063 putative membrane protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D YPO1613 putative lipoprotein K07337 K07337; penicillin-binding protein activator
D YPO1437 conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D YPO1708 ecpD; putative chaperone protein K15540 ecpD; chaperone protein EcpD
D YPO2944 putative pili chaperone protein K15540 ecpD; chaperone protein EcpD
D YPO1035 syd; Syd protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D YPO3422 ampE; putative membrane-bound sensory transducer in beta-lactamase regulation K03807 ampE; AmpE protein
D YPO0295 terA; putative tellurite resistance protein K05792 terA; tellurite resistance protein TerA
D YPO0298 terD; tellurium resistance protein K05795 terD; tellurium resistance protein TerD
D YPO0299 terE; tellurium resistance protein K05795 terD; tellurium resistance protein TerD
D YPO0294 terZ; tellurium resistance protein K05791 terZ; tellurium resistance protein TerZ
D YPO1704 proQ; ProP effector homologue K03607 proQ; ProP effector
D YPO3970 uspA; universal stress protein A K06149 uspA; universal stress protein A
D YPO2301 putative stress protein K14055 uspE; universal stress protein E
D YPO2234 cstA; putative carbon starvation protein A K06200 cstA; carbon starvation protein
D YPO3784 putative carbon starvation protein K06200 cstA; carbon starvation protein
D YPO0026 bipA; putative GTPase K06207 typA; GTP-binding protein
D YPO2619 conserved hypothetical protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D YPO1957 phoH; putative phosphate starvation-inducible protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D YPO2153 conserved hypothetical protein K07180 prkA; serine protein kinase
D YPO0651 putative exported protein K07184 ygiM; SH3 domain protein
D YPO0441 smp; putative membrane protein K07186 smp; membrane protein
D YPO3170 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D YPO1377 lolA; putative outer-membrane lipoproteins carrier protein K03634 lolA; outer membrane lipoprotein carrier protein
D YPO2015 putative lipoprotein K02494 lolB; outer membrane lipoprotein LolB
D YPO2743 vacJ; VacJ lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D YPO3865 b3785; putative lipopolysaccharide biosynthesis protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D YPO2373 pcp; putative lipoprotein K06077 slyB; outer membrane lipoprotein SlyB
D YPO1053 ompH; cationic 19 kDa outer membrane protein precursor K06142 hlpA; outer membrane protein
D YPO3356 nlpD; lipoprotein K06194 nlpD; lipoprotein NlpD
D YPO3489 nlpI; lipoprotein NlpI K05803 nlpI; lipoprotein NlpI
D YPO2201 ompW; putative exported protein K07275 ompW; outer membrane protein
D YPO3290 ydiY; putative exported protein K07283 ydiY; putative salt-induced outer membrane protein
D YPO2073 putative lipoprotein K07285 slp; outer membrane lipoprotein
D YPO3161 yajG; putative lipoprotein K07286 yajG; uncharacterized lipoprotein
D YPO1526 putative exported protein K07289 asmA; AsmA protein
D YPO3987 putative exported protein K07290 yhjG; AsmA family protein
D YPO3084 ybbJ; putative membrane protein K07340 ybbJ; inner membrane protein
D YPO1498 putative exported protein K02005 ABC.CD.TX; HlyD family secretion protein
D YPO2450 putative membrane protein K11744 tqsA; AI-2 transport protein TqsA
D YPO2229 osmB; osmotically inducible lipoprotein B precursor K04062 osmB; osmotically inducible lipoprotein OsmB
D YPO0894 creD; putative membrane protein K06143 creD; inner membrane protein
D YPO2738 ccmE; putative cytochrome c-type biogenesis protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D YPO2741 ccmH; putative cytochrome c-type biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D YPO2880 yfgA; putative DNA-binding protein K15539 rodZ; cytoskeleton protein RodZ
D YPO3684 putative membrane protein K21695 aaeX; protein AaeX
D YPO0590 hdeD; putative membrane protein K21908 hdeD; membrane protein HdeD
C 99994 Others
D YPO4113 nmpA; putative phosphate transport system protein K02039 phoU; phosphate transport system protein
D YPO0205 bfd; putative bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D YPO0296 terB; tellurite resistance protein K05793 terB; tellurite resistance protein TerB
D YPO0297 terC; tellurium resistance protein K05794 terC; tellurite resistance protein TerC
D YPO0346 putative cation tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D YPO2048 cutC; putative copper homeostasis protein K06201 cutC; copper homeostasis protein
D YPO3461 phnK; phosphonates transport ATP-binding protein K05781 phnK; putative phosphonate transport system ATP-binding protein
D YPO0491 apaG; ApaG protein homologue K06195 apaG; ApaG protein
D YPO3847 cyaY; frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D YPO0282 hmuS; hemin transport protein K07225 hmuS; putative hemin transport protein
D YPO0285 conserved hypothetical protein K07227 chuX; heme iron utilization protein
D YPO3130 conserved hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D YPO2771 cvpA; putative colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D YPO1421 pqiB; putative paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D YPO2042 putative oxidoreductase K03810 mviM; virulence factor
D YPO3274 putative lipoprotein K05811 yfiM; putative lipoprotein
D YPO0431 b4376; osmotically inducible protein Y K04065 osmY; hyperosmotically inducible periplasmic protein
D YPO2037 conserved hypothetical protein K04477 ycdX; putative hydrolase
D YPO2705 conserved hypothetical protein K06866 grcA; autonomous glycyl radical cofactor
D YPO3387 conserved hypothetical protein K15724 erpA; iron-sulfur cluster insertion protein
D YPO2404 conserved hypothetical protein K05997 sufA; Fe-S cluster assembly protein SufA
D YPO2403 conserved hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB
D YPO2401 conserved hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D YPO1717 ydjM; putative membrane protein K07038 K07038; inner membrane protein
D YPO3045 ybcI; putative membrane protein K07038 K07038; inner membrane protein
D YPO3985 putative membrane protein K07058 K07058; membrane protein
D YPO0028 rbn; ribonuclease BN K07058 K07058; membrane protein
D YPO0349 putative membrane protein K07113 fxsA; UPF0716 protein FxsA
D YPO2399 conserved hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D YPO1027 conserved hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D YPO2451 conserved hypothetical protein K07146 K07146; UPF0176 protein
D YPO1637 conserved hypothetical protein K07153 hflD; high frequency lysogenization protein
D YPO1528 putative ferric iron reductase K13255 fhuF; ferric iron reductase protein FhuF
D YPO2732 3; putative exported protein K03744 lemA; LemA protein
D YPO0194 conserved hypothetical protein K03745 slyX; SlyX protein
D YPO0244 conserved hypothetical protein K03747 smg; Smg protein
D YPO0457 creA; putative exported protein K05805 creA; CreA protein
D YPO0932 conserved hypothetical protein K02742 sprT; SprT protein
D YPO2770 dedD; putative membrane protein K03749 dedD; DedD protein
D YPO0153 conserved hypothetical membrane protein K03112 damX; DamX protein
D YPO1510 sanA; putative exported protein K03748 sanA; SanA protein
D YPO2767 dedA; putative membrane protein K03975 dedA; membrane-associated protein
D YPO1420 pqiA; putative paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D YPO1702 yebS; putative membrane protein K03808 pqiA; paraquat-inducible protein A
D YPO2531 elaB; putative membrane protein K05594 elaB; ElaB protein
D YPO2347 putative membrane protein K08990 ycjF; putative membrane protein
D YPO3816a yhhL; putative membrane protein K08993 yhhL; putative membrane protein
D YPO2574 putative membrane protein K08996 yagU; putative membrane protein
D YPO2172 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D YPO3140 ybaY; putative lipoprotein K09914 K09914; putative lipoprotein
D YPO3710 malM; maltose operon periplasmic protein K05775 malM; maltose operon periplasmic protein
D YPO3717 yjbA; putative membrane protein K13256 psiE; protein PsiE
D YPO2730 conserved hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D YPO1002 enterotoxin-like protein K06867 K06867; uncharacterized protein
D YPO2707 yplB; putative phospholipase A accessory protein K06867 K06867; uncharacterized protein
D YPO3339 hypothetical protein K06867 K06867; uncharacterized protein
D YPO0841 putative regulatory protein K06871 K06871; uncharacterized protein
D YPO1496 putative heme-binding protein K06871 K06871; uncharacterized protein
D YPO3046 putative sulfatase modifier protein K06871 K06871; uncharacterized protein
D YPO2793 putative membrane protein K06887 K06887; uncharacterized protein
D YPO2868 conserved hypothetical protein K06887 K06887; uncharacterized protein
D YPO2962 conserved hypothetical protein K06887 K06887; uncharacterized protein
D YPO1872 conserved hypothetical protein K06887 K06887; uncharacterized protein
D YPO2002 conserved hypothetical protein K06889 K06889; uncharacterized protein
D YPO1163 putative membrane protein K06890 K06890; uncharacterized protein
D YPO1880 phage-related protein K06903 W; Bacteriophage baseplate protein W
D YPO2348 conserved hypothetical protein K06918 K06918; uncharacterized protein
D YPMT1.66c YPMT1.66c; putative DNA-binding protein K06921 K06921; uncharacterized protein
D YPO1443 conserved hypothetical protein K06929 K06929; uncharacterized protein
D YPO2376 conserved hypothetical protein K06938 K06938; uncharacterized protein
D YPO1286 conserved hypothetical protein K06940 K06940; uncharacterized protein
D YPO1716 gltP; putative transport protein K06956 K06956; uncharacterized protein
D YPO0667 conserved hypothetical protein K07000 K07000; uncharacterized protein
D YPO1616 conserved hypothetical protein K07000 K07000; uncharacterized protein
D YPO1260 putative membrane protein K07014 K07014; uncharacterized protein
D YPO0180 conserved hypothetical protein K07019 K07019; uncharacterized protein
D YPO0467 yaaH; putative membrane protein K07034 K07034; uncharacterized protein
D YPO3058 putative membrane protein K07054 K07054; uncharacterized protein
D YPO0192 conserved hypothetical protein K07070 K07070; uncharacterized protein
D YPO2778 conserved hypothetical protein K07071 K07071; uncharacterized protein
D YPO2753 yfcA; putative membrane protein K07090 K07090; uncharacterized protein
D YPO2780 conserved hypothetical protein K07095 K07095; uncharacterized protein
D YPO3528 putative exported protein K07109 K07109; uncharacterized protein
D YPO0274 putative integral membrane protein K07112 K07112; uncharacterized protein
D YPO3548 putative exported protein K07121 K07121; uncharacterized protein
D YPO1989 putative exported protein K07126 K07126; uncharacterized protein
D YPMT1.26c YPMT1.26c; hypothetical protein YPMT1.26c K07128 K07128; uncharacterized protein
D YPMT1.27c YPMT1.27c; putative ABC transporter ATP-binding protein K07128 K07128; uncharacterized protein
D YPO2051 putative membrane protein K07136 K07136; uncharacterized protein
D YPO3556 conserved hypothetical protein K07139 K07139; uncharacterized protein
D YPO1417 putative iron-sulfur binding protein K07140 K07140; MOSC domain-containing protein
D YPO1506 yeiB; putative exported protein K07148 K07148; uncharacterized protein
D YPO0944 conserved hypothetical protein K09131 K09131; uncharacterized protein
D YPO2600 conserved hypothetical protein K09158 K09158; uncharacterized protein
D YPO2083 conserved hypothetical protein K09160 K09160; uncharacterized protein
D YPO2563 conserved hypothetical protein K09161 K09161; uncharacterized protein
D YPO3033 conserved hypothetical protein K09768 K09768; uncharacterized protein
D YPO2192 conserved hypothetical protein K09780 K09780; uncharacterized protein
D YPO2152 conserved hypothetical protein K09786 K09786; uncharacterized protein
D YPO1399 conserved hypothetical protein K09791 K09791; uncharacterized protein
D YPO1103 conserved hypothetical protein K09801 K09801; uncharacterized protein
D YPO1560 conserved hypothetical protein K09802 K09802; uncharacterized protein
D YPO0917 yggE; putative exported protein K09807 K09807; uncharacterized protein
D YPO1363 putative virulence factor K09824 virK; uncharacterized protein
D YPO3233 putative exported protein K05952 K05952; uncharacterized protein
D YPO1422 putative lipoprotein protein K09857 K09857; uncharacterized protein
D YPO0462 conserved hypothetical protein K09861 K09861; uncharacterized protein
D YPO3432 conserved hypothetical protein K09862 K09862; uncharacterized protein
D YPO3732 conserved hypothetical protein K09891 K09891; uncharacterized protein
D YPO0020 conserved hypothetical protein K09894 K09894; uncharacterized protein
D YPO0911 putative exported protein K09895 K09895; uncharacterized protein
D YPO0013a conserved hypothetical protein K09896 K09896; uncharacterized protein
D YPO3903 conserved hypothetical protein K09897 K09897; uncharacterized protein
D YPO0179 conserved hypothetical protein K09898 K09898; uncharacterized protein
D YPO2564 conserved hypothetical protein K09899 K09899; uncharacterized protein
D YPO2187 conserved hypothetical protein K09901 K09901; uncharacterized protein
D YPO2080 conserved hypothetical protein K09902 K09902; uncharacterized protein
D YPO1261 conserved hypothetical protein K09904 K09904; uncharacterized protein
D YPO2047 conserved hypothetical protein K09907 K09907; uncharacterized protein
D YPO3565 putative membrane protein K09908 K09908; uncharacterized protein
D YPO1442 putative exported protein K09909 K09909; uncharacterized protein
D YPO3414 conserved hypothetical protein K09910 K09910; uncharacterized protein
D YPO1433 conserved hypothetical protein K09911 K09911; uncharacterized protein
D YPO1575 conserved hypothetical protein K09912 K09912; uncharacterized protein
D YPO2159 conserved hypothetical protein K09916 K09916; uncharacterized protein
D YPO1774 conserved hypothetical protein K09917 K09917; uncharacterized protein
D YPO1777 conserved hypothetical protein K09918 K09918; uncharacterized protein
D YPO0665 conserved hypothetical protein K09920 K09920; uncharacterized protein
D YPO3844 conserved hypothetical protein K09921 K09921; uncharacterized protein
D YPO0950 conserved hypothetical protein K09923 K09923; uncharacterized protein
D YPO0377 putative membrane protein K09937 K09937; uncharacterized protein
D YPO2854 conserved hypothetical protein K09946 K09946; uncharacterized protein
D YPO2988 conserved hypothetical protein K09954 K09954; uncharacterized protein
D YPO2986 conserved hypothetical protein K09962 K09962; uncharacterized protein
D YPO3087 conserved hypothetical protein K09973 K09973; uncharacterized protein
D YPO1975 conserved hypothetical protein K09975 K09975; uncharacterized protein
D YPO2326 putative exported protein K09978 K09978; uncharacterized protein
D YPO3467 conserved hypothetical protein K09979 K09979; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 14, 2024