| T00012 | bbu | Borreliella burgdorferi B31 |
| T00807 | bbz | Borreliella burgdorferi ZS7 |
| T02075 | bbn | Borreliella burgdorferi N40 |
| T02081 | bbj | Borreliella burgdorferi JD1 |
| T02794 | bbur | Borreliella burgdorferi CA382 |
| T00194 | bga | Borrelia garinii subsp. bavariensis |
| T02048 | bgb | Borreliella garinii BgVir |
| T02299 | bgn | Borreliella garinii NMJW1 |
| T03259 | bgs | Borreliella garinii SZ |
| T04731 | bgc | Borreliella garinii CIP 103362 |
| T00383 | baf | Borrelia afzelii (FLI) |
| T02093 | bafz | Borrelia afzelii (Maryland) |
| T02298 | bafh | Borreliella afzelii HLJ01 |
| T03256 | baft | Borreliella afzelii Tom3107 |
| T03895 | bafe | Borreliella afzelii K78 |
| T01593 | bbs | Borreliella bissettii |
| T03221 | bvt | Borreliella valaisiana |
| T03543 | bchi | Borreliella chilensis |
| T04886 | bmay | Borreliella mayonii |
| T09185 | btud | Borreliella turdi |
| T09196 | bku | Borreliella kurtenbachii |
| T09223 | bff | Borreliella finlandensis |
| T09230 | blus | Borreliella lusitaniae |
| T09264 | bame | Borreliella americana |
| T09301 | byn | Borreliella yangtzensis |
| T09309 | bjo | Borreliella japonica |
| T09315 | bspi | Borreliella spielmanii |
| T09320 | blan | Borreliella lanei |
| T09333 | bcaf | Borreliella californiensis |
| T09341 | batn | Borreliella tanukii |
| T09353 | bcaz | Borreliella carolinensis |
| T09475 | band | Borreliella andersonii |
| T09575 | bsin | Borreliella sinica |
Genus: Borreliella