KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: abe00010 abe01200 abe01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: abe00010 abe01200 abe01230 abe01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: abe00010 abe00020 abe01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: abe00010 abe00020 abe00620 abe00785 abe01200 abe01210 abe01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: abe00020 abe01200 abe01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: abe00020 abe01200 abe01210 abe01230 abe01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: abe00020 abe01200 abe01210 abe01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: abe00030 abe01200 abe01100]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: abe00030 abe01200 abe01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: abe00030 abe01200 abe01230 abe01100]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: abe00030 abe00230 abe01200 abe01230 abe01100]
Other carbohydrate metabolism
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:abe00052 abe01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:abe00500 abe01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:abe00500 abe01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:abe00520 abe01250 abe01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:abe00520 abe00052 abe01250 abe01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:abe00520 abe01250 abe01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:abe00520 abe01250 abe01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:abe00520 abe01100]
M00012 Glyoxylate cycle [PATH:abe00630 abe01200 abe01100 abe01110]
M00013 Malonate semialdehyde pathway, propanoyl-CoA => acetyl-CoA [PATH:abe00410 abe00640 abe01200 abe01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: abe00730 abe01240 abe01100]
M00898 Thiamine biosynthesis, pyridoxal-5P => TMP/thiamine/TPP [PATH: abe00730 abe01240 abe01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: abe00730 abe01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: abe00740 abe01240 abe01100 abe01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: abe00750 abe01240 abe01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: abe00750 abe01240 abe01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: abe00760 abe01240 abe01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: abe00770 abe01240 abe01100 abe01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: abe00770 abe01240 abe01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: abe00780 abe01240 abe01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: abe00780 abe01240 abe01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: abe00785 abe01240 abe01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH: abe00785 abe01240 abe01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: abe00790 abe00670 abe01240 abe01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: abe00790 abe01240 abe01100]
M00140 C1-unit interconversion, prokaryotes [PATH: abe00670 abe01240 abe01100]
M00141 C1-unit interconversion, eukaryotes [PATH: abe00670 abe01240 abe01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: abe00860 abe01240 abe01100 abe01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH: abe00860 abe01240 abe01100 abe01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: abe00860 abe01240 abe01100 abe01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: abe00130 abe01240 abe01100 abe01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH: abe00130 abe01240 abe01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: abe00130 abe01240 abe01100 abe01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation
M00548 Benzene degradation, benzene => catechol [PATH:abe01100]
M00551 Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:abe01100]
M00568 Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:abe01100]
Signature modules
Gene set
Pathogenicity
Drug resistance
M00642 Multidrug resistance, efflux pump MexJK-OprM
M00649 Multidrug resistance, efflux pump AdeABC [PATH:abe01501]
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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