KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:agyl00010 agyl00020 agyl01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:agyl00010 agyl00020 agyl00620 agyl00785 agyl01200 agyl01210 agyl01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:agyl00020 agyl01200 agyl01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:agyl00020 agyl01200 agyl01210 agyl01230 agyl01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:agyl00020 agyl01200 agyl01210 agyl01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:agyl00030 agyl01200 agyl01230 agyl01100 agyl01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:agyl00030 agyl00230 agyl01200 agyl01230 agyl01100]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:agyl00730 agyl01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:agyl00770 agyl01240 agyl01100 agyl01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:agyl00770 agyl01240 agyl01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:agyl00780 agyl01240 agyl01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:agyl00780 agyl01240 agyl01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:agyl00785 agyl01240 agyl01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:agyl00790 agyl00670 agyl01240 agyl01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:agyl00860 agyl01240 agyl01100 agyl01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:agyl00860 agyl01240 agyl01100 agyl01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00642 Multidrug resistance, efflux pump MexJK-OprM
M00649 Multidrug resistance, efflux pump AdeABC [PATH:agyl01501]
M00698 Multidrug resistance, efflux pump BpeEF-OprC
Plant pathogenicity
Symbiosis
Module set
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