KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: apa00010 apa01200 apa01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: apa00010 apa01200 apa01230 apa01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: apa00010 apa00020 apa01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: apa00010 apa00020 apa00620 apa00785 apa01200 apa01210 apa01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: apa00020 apa01200 apa01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: apa00020 apa01200 apa01210 apa01230 apa01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: apa00020 apa01200 apa01210 apa01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: apa00030 apa01200 apa01100 apa01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: apa00030 apa01200 apa01100 apa01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: apa00030 apa01200 apa01230 apa01100 apa01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: apa00030 apa00230 apa01200 apa01230 apa01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: apa00030 apa01200 apa01100 apa01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:apa00040 apa00030 apa01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:apa00040 apa00030 apa01100]
M00081 Pectin degradation [PATH:apa00040 apa01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:apa00052 apa01100]
M00114 Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:apa00051 apa00053 apa01240 apa01100 apa01110]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:apa00053 apa01100 apa01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:apa00500 apa01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:apa00500 apa01100 apa01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:apa00520 apa01250 apa01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:apa00520 apa00052 apa01250 apa01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:apa00520 apa01250 apa01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:apa00520 apa01250 apa01100]
M00012 Glyoxylate cycle [PATH:apa00630 apa01200 apa01100 apa01110]
M00532 Photorespiration [PATH:apa00630 apa01200 apa01100 apa01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:apa00280 apa00630 apa00640 apa01200 apa01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:apa00562 apa01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00895 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/glycine) => TMP/TPP [PATH:apa00730 apa01240 apa01100]
M00897 Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:apa00730 apa01240 apa01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:apa00730 apa01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:apa00740 apa01240 apa01100 apa01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:apa00750 apa01240 apa01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:apa00760 apa01240 apa01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:apa00770 apa01240 apa01100 apa01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:apa00770 apa01240 apa01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:apa00780 apa01240 apa01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:apa00780 apa01240 apa01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:apa00780 apa01240 apa01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:apa00785 apa01240 apa01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:apa00785 apa01240 apa01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:apa00785 apa01240 apa01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:apa00790 apa00670 apa01240 apa01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:apa00790 apa01240 apa01100]
M00140 C1-unit interconversion, prokaryotes [PATH:apa00670 apa01240 apa01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:apa00860 apa01240 apa01100 apa01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:apa00860 apa01240 apa01100 apa01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:apa00860 apa01240 apa01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:apa00860 apa01240 apa01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:apa00130 apa01240 apa01100 apa01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:apa00130 apa01240 apa01100 apa01110]
M00931 Menaquinone biosynthesis, modified futalosine pathway [PATH:apa00130 apa01240 apa01100]
M00932 Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:apa00130 apa01240 apa01100 apa01110]
M00112 Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:apa00130 apa01240 apa01100 apa01110]
M00933 Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:apa00130 apa01240 apa01100 apa01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
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