KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: asu00010 asu01200 asu01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: asu00010 asu01200 asu01230 asu01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: asu00010 asu00020 asu01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: asu00010 asu00020 asu00620 asu00785 asu01200 asu01210 asu01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: asu00020 asu01200 asu01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: asu00020 asu01200 asu01210 asu01230 asu01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: asu00020 asu01200 asu01210 asu01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: asu00030 asu01200 asu01100 asu01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: asu00030 asu01200 asu01100 asu01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: asu00030 asu01200 asu01230 asu01100 asu01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: asu00030 asu01200 asu01230 asu01100 asu01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: asu00030 asu00230 asu01200 asu01230 asu01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: asu00030 asu01200 asu01100 asu01120]
M00309 Non-phosphorylative Entner-Doudoroff pathway, gluconate/galactonate => glycerate [PATH: asu00030 asu00052 asu01200 asu01100 asu01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: asu00040 asu01100]
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH: asu00040 asu00030 asu01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: asu00040 asu00030 asu01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: asu00052 asu01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH: asu00052 asu01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH: asu00053 asu01100 asu01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: asu00500 asu01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: asu00500 asu01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH: asu00500 asu01100 asu01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: asu00520 asu01250 asu01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: asu00520 asu00052 asu01250 asu01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: asu00520 asu01250 asu01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: asu00520 asu01250 asu01100]
M00012 Glyoxylate cycle [PATH: asu00630 asu01200 asu01100 asu01110]
M00013 Malonate semialdehyde pathway, propanoyl-CoA => acetyl-CoA [PATH: asu00410 asu00640 asu01200 asu01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: asu00280 asu00630 asu00640 asu01200 asu01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: asu00562 asu01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: asu00562 asu01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
M00057 Glycosaminoglycan biosynthesis, linkage tetrasaccharide [PATH: asu01100]
M00058 Glycosaminoglycan biosynthesis, chondroitin sulfate backbone [PATH: asu01100]
M00059 Glycosaminoglycan biosynthesis, heparan sulfate backbone [PATH: asu01100]
M00076 Dermatan sulfate degradation [PATH: asu01100]
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: asu00730 asu01240 asu01100]
M00896 Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP [PATH: asu00730 asu01240 asu01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: asu00730 asu01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: asu00740 asu01240 asu01100 asu01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: asu00750 asu01240 asu01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: asu00750 asu01240 asu01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: asu00760 asu01240 asu01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: asu00770 asu01240 asu01100 asu01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: asu00770 asu01240 asu01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: asu00780 asu01240 asu01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: asu00780 asu01240 asu01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: asu00785 asu01240 asu01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH: asu00785 asu01240 asu01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: asu00785 asu01240 asu01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: asu00790 asu00670 asu01240 asu01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH: asu00790 asu01240 asu01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: asu00790 asu01240 asu01100]
M00140 C1-unit interconversion, prokaryotes [PATH: asu00670 asu01240 asu01100]
M00141 C1-unit interconversion, eukaryotes [PATH: asu00670 asu01240 asu01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: asu00860 asu01240 asu01100 asu01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH: asu00860 asu01240 asu01100 asu01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: asu00860 asu01240 asu01100 asu01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: asu00860 asu01240 asu01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: asu00130 asu01240 asu01100 asu01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH: asu00130 asu01240 asu01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: asu00130 asu01240 asu01100 asu01110]
M00931 Menaquinone biosynthesis, modified futalosine pathway [PATH: asu00130 asu01240 asu01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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