KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: bce00010 bce01200 bce01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: bce00010 bce01200 bce01230 bce01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: bce00010 bce00020 bce01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: bce00010 bce00020 bce00620 bce00785 bce01200 bce01210 bce01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: bce00020 bce01200 bce01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: bce00020 bce01200 bce01210 bce01230 bce01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: bce00020 bce01200 bce01210 bce01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: bce00030 bce01200 bce01100 bce01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: bce00030 bce01200 bce01100 bce01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: bce00030 bce01200 bce01230 bce01100 bce01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: bce00030 bce00230 bce01200 bce01230 bce01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: bce00030 bce01200 bce01100 bce01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:bce00040 bce00030 bce01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:bce00040 bce00030 bce01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:bce00052 bce01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bce00500 bce01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:bce00500 bce01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bce00520 bce01250 bce01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bce00520 bce01250 bce01100]
M00012 Glyoxylate cycle [PATH:bce00630 bce01200 bce01100 bce01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:bce00280 bce00630 bce00640 bce01200 bce01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00896 Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP [PATH:bce00730 bce01240 bce01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:bce00730 bce01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bce00740 bce01240 bce01100 bce01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bce00750 bce01240 bce01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bce00760 bce01240 bce01100]
M00622 Nicotinate degradation, nicotinate => fumarate [PATH:bce00760 bce01100 bce01120]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bce00770 bce01240 bce01100 bce01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:bce00770 bce01240 bce01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:bce00780 bce01240 bce01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bce00780 bce01240 bce01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:bce00785 bce01240 bce01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bce00785 bce01240 bce01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:bce00790 bce00670 bce01240 bce01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bce00790 bce01240 bce01100]
M00140 C1-unit interconversion, prokaryotes [PATH:bce00670 bce01240 bce01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bce00860 bce01240 bce01100 bce01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:bce00860 bce01240 bce01100 bce01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bce00860 bce01240 bce01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:bce00860 bce01240 bce01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:bce00130 bce01240 bce01100 bce01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bce00130 bce01240 bce01100 bce01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:bce01501]
M00643 Multidrug resistance, efflux pump MexXY-OprM
M00649 Multidrug resistance, efflux pump AdeABC [PATH:bce01501]
M00698 Multidrug resistance, efflux pump BpeEF-OprC
M00700 Multidrug resistance, efflux pump AbcA
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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