KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: bth00010 bth01200 bth01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: bth00010 bth01200 bth01230 bth01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: bth00010 bth00020 bth01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: bth00010 bth00020 bth00620 bth00785 bth01200 bth01210 bth01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: bth00020 bth01200 bth01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: bth00020 bth01200 bth01210 bth01230 bth01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: bth00020 bth01200 bth01210 bth01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: bth00030 bth01200 bth01100 bth01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: bth00030 bth01200 bth01100 bth01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: bth00030 bth01200 bth01230 bth01100 bth01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: bth00030 bth00230 bth01200 bth01230 bth01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: bth00030 bth01200 bth01100 bth01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:bth00040 bth00030 bth01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:bth00052 bth01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:bth00052 bth01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bth00500 bth01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:bth00500 bth01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bth00520 bth01250 bth01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:bth00520 bth00052 bth01250 bth01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bth00520 bth01250 bth01100]
M00012 Glyoxylate cycle [PATH:bth00630 bth01200 bth01100 bth01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:bth00730 bth01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bth00740 bth01240 bth01100 bth01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bth00750 bth01240 bth01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bth00760 bth01240 bth01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bth00770 bth01240 bth01100 bth01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:bth00770 bth01240 bth01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:bth00780 bth01240 bth01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bth00780 bth01240 bth01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:bth00785 bth01240 bth01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bth00785 bth01240 bth01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:bth00790 bth00670 bth01240 bth01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bth00790 bth01240 bth01100]
M00140 C1-unit interconversion, prokaryotes [PATH:bth00670 bth01240 bth01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bth00860 bth01240 bth01100 bth01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:bth00860 bth01240 bth01100 bth01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bth00860 bth01240 bth01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:bth00860 bth01240 bth01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:bth00130 bth01240 bth01100 bth01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bth00130 bth01240 bth01100 bth01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:bth01501]
M00643 Multidrug resistance, efflux pump MexXY-OprM
M00698 Multidrug resistance, efflux pump BpeEF-OprC
M00700 Multidrug resistance, efflux pump AbcA
M00705 Multidrug resistance, efflux pump MepA
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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