KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: clu00010 clu01200 clu01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: clu00010 clu01200 clu01230 clu01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: clu00010 clu00020 clu01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: clu00010 clu00020 clu00620 clu00785 clu01200 clu01210 clu01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: clu00020 clu01200 clu01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: clu00020 clu01200 clu01210 clu01230 clu01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: clu00020 clu01200 clu01210 clu01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: clu00030 clu01200 clu01100]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: clu00030 clu01200 clu01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: clu00030 clu01200 clu01230 clu01100]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: clu00030 clu00230 clu01200 clu01230 clu01100]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: clu00040 clu01100]
M00630 D-Galacturonate degradation (fungi), D-galacturonate => glycerol [PATH: clu00040 clu01100]
M00081 Pectin degradation [PATH: clu00040 clu01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: clu00052 clu01100]
M00129 Ascorbate biosynthesis, animals, glucose-1P => ascorbate [PATH: clu00040 clu00053 clu01240 clu01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: clu00500 clu01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: clu00500 clu01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: clu00520 clu01250 clu01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: clu00520 clu00052 clu01250 clu01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: clu00520 clu01250 clu01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: clu00520 clu01250 clu01100]
M00012 Glyoxylate cycle [PATH: clu00630 clu01200 clu01100 clu01110]
M00013 Malonate semialdehyde pathway, propanoyl-CoA => acetyl-CoA [PATH: clu00410 clu00640 clu01200 clu01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: clu00280 clu00630 clu00640 clu01200 clu01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: clu00562 clu01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: clu00562 clu01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: clu00562 clu01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00101 Cholesterol biosynthesis, FPP => cholesterol [PATH: clu00100 clu01100]
M00102 Ergocalciferol biosynthesis, FPP => ergosterol/ergocalciferol [PATH: clu00100 clu01100 clu01110]
M00103 Cholecalciferol biosynthesis [PATH: clu00100 clu01100]
M00106 Conjugated bile acid biosynthesis, cholate => taurocholate/glycocholate [PATH: clu01100]
M00862 beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA [PATH: clu01100]
M00107 Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH: clu01100]
M00109 C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH: clu01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH: clu01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH: clu01100]
M00977 C19-Steroid hormone biosynthesis (androgen backdoor pathway), pregnenolone => androsterone => dihydrotestosterone [PATH: clu01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: clu00400 clu01230 clu01100 clu01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: clu00400 clu01230 clu01100 clu01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: clu00400 clu01230 clu01100 clu01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH: clu00400 clu01230 clu01100]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: clu00350 clu01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: clu00350 clu01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: clu00350 clu01100]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: clu00380 clu01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: clu00380 clu01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00055 N-glycan precursor biosynthesis [PATH: clu00510 clu01100]
M00072 N-glycosylation by oligosaccharyltransferase [PATH: clu00510 clu00513 clu01100]
M00073 N-glycan precursor trimming [PATH: clu00510 clu01100]
M00075 N-glycan biosynthesis, complex type [PATH: clu00510 clu01100]
M00056 O-glycan biosynthesis, mucin type core [PATH: clu01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH: clu00515 clu01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH: clu01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH: clu01100]
M00068 Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer [PATH: clu01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH: clu00604 clu01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00911 Riboflavin biosynthesis, fungi, GTP => riboflavin/FMN/FAD [PATH:clu00740 clu01240 clu01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:clu00750 clu01240 clu01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:clu00380 clu00760 clu01240 clu01100]
M00913 Pantothenate biosynthesis, 2-oxoisovalerate/spermine => pantothenate [PATH:clu00770 clu01240 clu01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:clu00770 clu01240 clu01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:clu00780 clu01240 clu01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:clu00785 clu01240 clu01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:clu00785 clu01240 clu01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:clu00785 clu01240 clu01100]
M00884 Lipoic acid biosynthesis, octanoyl-CoA => dihydrolipoyl-E2 [PATH:clu00785 clu01240 clu01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:clu00790 clu00670 clu01240 clu01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:clu00790 clu01240 clu01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:clu00790 clu01240 clu01100]
M00140 C1-unit interconversion, prokaryotes [PATH:clu00670 clu01240 clu01100]
M00141 C1-unit interconversion, eukaryotes [PATH:clu00670 clu01240 clu01100]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:clu00860 clu01240 clu01100 clu01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:clu00860 clu01240 clu01100]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:clu00130 clu01240 clu01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
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