KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ece00010 ece01200 ece01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ece00010 ece01200 ece01230 ece01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ece00010 ece00020 ece01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ece00010 ece00020 ece00620 ece00785 ece01200 ece01210 ece01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ece00020 ece01200 ece01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ece00020 ece01200 ece01210 ece01230 ece01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ece00020 ece01200 ece01210 ece01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ece00030 ece01200 ece01100 ece01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ece00030 ece01200 ece01100 ece01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ece00030 ece01200 ece01230 ece01100 ece01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ece00030 ece00230 ece01200 ece01230 ece01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: ece00030 ece01200 ece01100 ece01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ece00040 ece00030 ece01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ece00040 ece00030 ece01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ece00052 ece01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:ece00053 ece01100 ece01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ece00500 ece01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:ece00500 ece01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ece00520 ece01250 ece01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ece00520 ece00052 ece01250 ece01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ece00520 ece01250 ece01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ece00520 ece01100]
M00012 Glyoxylate cycle [PATH:ece00630 ece01200 ece01100 ece01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: ece00730 ece01240 ece01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: ece00730 ece01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: ece00740 ece01240 ece01100 ece01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: ece00750 ece01240 ece01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: ece00760 ece01240 ece01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: ece00770 ece01240 ece01100 ece01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: ece00770 ece01240 ece01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: ece00780 ece01240 ece01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: ece00780 ece01240 ece01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: ece00785 ece01240 ece01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: ece00790 ece00670 ece01240 ece01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: ece00790 ece01240 ece01100]
M00140 C1-unit interconversion, prokaryotes [PATH: ece00670 ece01240 ece01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: ece00860 ece01240 ece01100 ece01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: ece00860 ece01240 ece01100 ece01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: ece00130 ece01240 ece01100 ece01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: ece00130 ece01240 ece01100 ece01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
M00542 EHEC/EPEC pathogenicity signature, T3SS and effectors [PATH:ece05130]
M00363 EHEC pathogenicity signature, Shiga toxin [PATH:ece05130]
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
M00697 Multidrug resistance, efflux pump MdtEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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