KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ecl00010 ecl01200 ecl01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ecl00010 ecl01200 ecl01230 ecl01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ecl00010 ecl00020 ecl01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ecl00010 ecl00020 ecl00620 ecl00785 ecl01200 ecl01210 ecl01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ecl00020 ecl01200 ecl01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ecl00020 ecl01200 ecl01210 ecl01230 ecl01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ecl00020 ecl01200 ecl01210 ecl01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ecl00030 ecl01200 ecl01100 ecl01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ecl00030 ecl01200 ecl01100 ecl01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ecl00030 ecl01200 ecl01230 ecl01100 ecl01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: ecl00030 ecl01200 ecl01230 ecl01100 ecl01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ecl00030 ecl00230 ecl01200 ecl01230 ecl01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: ecl00030 ecl01200 ecl01100 ecl01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ecl00040 ecl00030 ecl01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ecl00040 ecl00030 ecl01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ecl00052 ecl01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:ecl00052 ecl01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:ecl00053 ecl01100 ecl01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ecl00500 ecl01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:ecl00500 ecl01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:ecl00500 ecl01100 ecl01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ecl00520 ecl01250 ecl01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ecl00520 ecl00052 ecl01250 ecl01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ecl00520 ecl01250 ecl01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ecl00520 ecl01100]
M00012 Glyoxylate cycle [PATH:ecl00630 ecl01200 ecl01100 ecl01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: ecl00730 ecl01240 ecl01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: ecl00730 ecl01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: ecl00740 ecl01240 ecl01100 ecl01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: ecl00750 ecl01240 ecl01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: ecl00760 ecl01240 ecl01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: ecl00770 ecl01240 ecl01100 ecl01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: ecl00770 ecl01240 ecl01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: ecl00780 ecl01240 ecl01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: ecl00780 ecl01240 ecl01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: ecl00785 ecl01240 ecl01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: ecl00790 ecl00670 ecl01240 ecl01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: ecl00790 ecl01240 ecl01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: ecl00860 ecl01240 ecl01100 ecl01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: ecl00860 ecl01240 ecl01100 ecl01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: ecl00130 ecl01240 ecl01100 ecl01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: ecl00130 ecl01240 ecl01100 ecl01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00851 Carbapenem resistance [PATH: ecl01501]
M00696 Multidrug resistance, efflux pump AcrEF-TolC
M00697 Multidrug resistance, efflux pump MdtEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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