KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ecs00010 ecs01200 ecs01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ecs00010 ecs01200 ecs01230 ecs01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ecs00010 ecs00020 ecs01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ecs00010 ecs00020 ecs00620 ecs00785 ecs01200 ecs01210 ecs01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ecs00020 ecs01200 ecs01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ecs00020 ecs01200 ecs01210 ecs01230 ecs01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ecs00020 ecs01200 ecs01210 ecs01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ecs00030 ecs01200 ecs01100 ecs01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ecs00030 ecs01200 ecs01100 ecs01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ecs00030 ecs01200 ecs01230 ecs01100 ecs01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ecs00030 ecs00230 ecs01200 ecs01230 ecs01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: ecs00030 ecs01200 ecs01100 ecs01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ecs00040 ecs00030 ecs01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ecs00040 ecs00030 ecs01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ecs00052 ecs01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:ecs00053 ecs01100 ecs01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ecs00500 ecs01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:ecs00500 ecs01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ecs00520 ecs01250 ecs01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ecs00520 ecs00052 ecs01250 ecs01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ecs00520 ecs01250 ecs01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ecs00520 ecs01100]
M00012 Glyoxylate cycle [PATH:ecs00630 ecs01200 ecs01100 ecs01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: ecs00730 ecs01240 ecs01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: ecs00730 ecs01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: ecs00740 ecs01240 ecs01100 ecs01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: ecs00750 ecs01240 ecs01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: ecs00760 ecs01240 ecs01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: ecs00770 ecs01240 ecs01100 ecs01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: ecs00770 ecs01240 ecs01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: ecs00780 ecs01240 ecs01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: ecs00780 ecs01240 ecs01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: ecs00785 ecs01240 ecs01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: ecs00790 ecs00670 ecs01240 ecs01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: ecs00790 ecs01240 ecs01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: ecs00860 ecs01240 ecs01100 ecs01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: ecs00860 ecs01240 ecs01100 ecs01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: ecs00130 ecs01240 ecs01100 ecs01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: ecs00130 ecs01240 ecs01100 ecs01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
M00542 EHEC/EPEC pathogenicity signature, T3SS and effectors [PATH:ecs05130]
M00363 EHEC pathogenicity signature, Shiga toxin [PATH:ecs05130]
Drug resistance
M00697 Multidrug resistance, efflux pump MdtEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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