KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: mca00010 mca01200 mca01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: mca00010 mca01200 mca01230 mca01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: mca00010 mca00020 mca01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: mca00010 mca00020 mca00620 mca00785 mca01200 mca01210 mca01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: mca00020 mca01200 mca01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: mca00020 mca01200 mca01210 mca01230 mca01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: mca00020 mca01200 mca01210 mca01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: mca00030 mca01200 mca01100 mca01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: mca00030 mca01200 mca01100 mca01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: mca00030 mca01200 mca01230 mca01100 mca01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: mca00030 mca01200 mca01230 mca01100 mca01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: mca00030 mca00230 mca01200 mca01230 mca01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: mca00030 mca01200 mca01100 mca01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: mca00040 mca01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: mca00040 mca00030 mca01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: mca00052 mca01100]
M00129 Ascorbate biosynthesis, animals, glucose-1P => ascorbate [PATH: mca00040 mca00053 mca01240 mca01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: mca00500 mca01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: mca00500 mca01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH: mca00500 mca01100 mca01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: mca00520 mca01250 mca01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: mca00520 mca00052 mca01250 mca01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: mca00520 mca01250 mca01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: mca00520 mca01250 mca01100]
M00012 Glyoxylate cycle [PATH: mca00630 mca01200 mca01100 mca01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: mca00280 mca00630 mca00640 mca01200 mca01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: mca00562 mca01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: mca00562 mca01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: mca00562 mca01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00101 Cholesterol biosynthesis, FPP => cholesterol [PATH: mca00100 mca01100]
M00103 Cholecalciferol biosynthesis [PATH: mca00100 mca01100]
M00106 Conjugated bile acid biosynthesis, cholate => taurocholate/glycocholate [PATH: mca01100]
M00862 beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA [PATH: mca01100]
M00107 Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH: mca01100]
M00109 C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH: mca01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH: mca01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH: mca01100]
M00977 C19-Steroid hormone biosynthesis (androgen backdoor pathway), pregnenolone => androsterone => dihydrotestosterone [PATH: mca01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: mca00400 mca01230 mca01100 mca01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: mca00400 mca01230 mca01100 mca01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: mca00400 mca01230 mca01100 mca01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH: mca00400 mca01230 mca01100]
M00040 Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH: mca00400 mca01230 mca01100 mca01110]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: mca00350 mca01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: mca00350 mca01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: mca00350 mca01100]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: mca00380 mca01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: mca00380 mca01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00055 N-glycan precursor biosynthesis [PATH: mca01100]
M00073 N-glycan precursor trimming [PATH: mca01100]
M00075 N-glycan biosynthesis, complex type [PATH: mca01100]
M00056 O-glycan biosynthesis, mucin type core [PATH: mca01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH: mca00515 mca01100]
M00065 GPI-anchor biosynthesis, core oligosaccharide [PATH: mca01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH: mca01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH: mca01100]
M00068 Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer [PATH: mca01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH: mca01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:mca00730 mca01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:mca00740 mca01240 mca01100 mca01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:mca00750 mca01240 mca01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:mca00760 mca01240 mca01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:mca00380 mca00760 mca01240 mca01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:mca00770 mca01240 mca01100 mca01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:mca00770 mca01240 mca01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:mca00780 mca01240 mca01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:mca00780 mca01240 mca01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:mca00785 mca01240 mca01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:mca00785 mca01240 mca01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:mca00785 mca01240 mca01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:mca00790 mca00670 mca01240 mca01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:mca00790 mca01240 mca01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:mca00790 mca01240 mca01100]
M00140 C1-unit interconversion, prokaryotes [PATH:mca00670 mca01240 mca01100]
M00141 C1-unit interconversion, eukaryotes [PATH:mca00670 mca01240 mca01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:mca00860 mca01240 mca01100 mca01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:mca00860 mca01240 mca01100 mca01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:mca00860 mca01240 mca01100 mca01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:mca00860 mca01240 mca01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:mca00860 mca01240 mca01100]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:mca00130 mca01240 mca01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:mca00130 mca01240 mca01100 mca01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH:mca00130 mca01240 mca01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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