KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: pac00010 pac01200 pac01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: pac00010 pac01200 pac01230 pac01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: pac00010 pac00020 pac01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: pac00010 pac00020 pac00620 pac00785 pac01200 pac01210 pac01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: pac00020 pac01200 pac01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: pac00020 pac01200 pac01210 pac01230 pac01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: pac00020 pac01200 pac01210 pac01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: pac00030 pac01200 pac01100 pac01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: pac00030 pac01200 pac01100 pac01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: pac00030 pac01200 pac01230 pac01100 pac01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: pac00030 pac01200 pac01230 pac01100 pac01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: pac00030 pac00230 pac01200 pac01230 pac01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: pac00030 pac01200 pac01100 pac01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:pac00040 pac00030 pac01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pac00040 pac00030 pac01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pac00052 pac01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pac00052 pac01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:pac00053 pac01100 pac01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pac00500 pac01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:pac00500 pac01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:pac00500 pac01100 pac01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pac00520 pac01250 pac01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pac00520 pac00052 pac01250 pac01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pac00520 pac01250 pac01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pac00520 pac01100]
M00012 Glyoxylate cycle [PATH:pac00630 pac01200 pac01100 pac01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:pac00280 pac00630 pac00640 pac01200 pac01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: pac00730 pac01240 pac01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: pac00730 pac01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: pac00740 pac01240 pac01100 pac01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: pac00750 pac01240 pac01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: pac00750 pac01240 pac01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: pac00760 pac01240 pac01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: pac00770 pac01240 pac01100 pac01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: pac00770 pac01240 pac01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: pac00780 pac01240 pac01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: pac00780 pac01240 pac01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH: pac00780 pac01240 pac01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: pac00785 pac01240 pac01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: pac00790 pac00670 pac01240 pac01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: pac00790 pac01240 pac01100]
M00140 C1-unit interconversion, prokaryotes [PATH: pac00670 pac01240 pac01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: pac00860 pac01240 pac01100 pac01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: pac00860 pac01240 pac01100 pac01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: pac00860 pac01240 pac01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: pac00130 pac01240 pac01100 pac01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: pac00130 pac01240 pac01100 pac01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH: pac00130 pac01240 pac01100]
M00931 Menaquinone biosynthesis, modified futalosine pathway [PATH: pac00130 pac01240 pac01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:pac01501]
M00745 Imipenem resistance, repression of porin OprD
M00639 Multidrug resistance, efflux pump MexCD-OprJ
M00698 Multidrug resistance, efflux pump BpeEF-OprC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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