KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:pap00010 pap01200 pap01230 pap01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pap00010 pap00020 pap01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pap00010 pap00020 pap00620 pap00785 pap01200 pap01210 pap01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:pap00020 pap01200 pap01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pap00020 pap01200 pap01210 pap01230 pap01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pap00020 pap01200 pap01210 pap01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pap00030 pap01200 pap01100 pap01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pap00030 pap01200 pap01100 pap01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pap00030 pap01200 pap01230 pap01100 pap01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:pap00030 pap00230 pap01200 pap01230 pap01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pap00030 pap01200 pap01100 pap01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: pap00730 pap01240 pap01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: pap00740 pap01240 pap01100 pap01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: pap00750 pap01240 pap01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: pap00760 pap01240 pap01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: pap00770 pap01240 pap01100 pap01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: pap00770 pap01240 pap01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: pap00780 pap01240 pap01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: pap00780 pap01240 pap01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: pap00785 pap01240 pap01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: pap00790 pap00670 pap01240 pap01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: pap00790 pap01240 pap01100]
M00140 C1-unit interconversion, prokaryotes [PATH: pap00670 pap01240 pap01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: pap00860 pap01240 pap01100 pap01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: pap00860 pap01240 pap01100 pap01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: pap00860 pap01240 pap01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: pap00130 pap01240 pap01100 pap01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: pap00130 pap01240 pap01100 pap01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00851 Carbapenem resistance [PATH: pap01501]
M00745 Imipenem resistance, repression of porin OprD
M00718 Multidrug resistance, efflux pump MexAB-OprM
M00639 Multidrug resistance, efflux pump MexCD-OprJ
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
M00769 Multidrug resistance, efflux pump MexPQ-OpmE
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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