KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:pmm00010 pmm01200 pmm01230 pmm01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pmm00010 pmm00020 pmm00620 pmm00785 pmm01200 pmm01210 pmm01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pmm00020 pmm01200 pmm01210 pmm01230 pmm01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pmm00030 pmm01200 pmm01100 pmm01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pmm00030 pmm01200 pmm01100 pmm01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pmm00030 pmm01200 pmm01230 pmm01100 pmm01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:pmm00030 pmm00230 pmm01200 pmm01230 pmm01100]

Other carbohydrate metabolism
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pmm00500 pmm01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pmm00520 pmm01250 pmm01100]

Energy metabolism
Carbon fixation
M00165 Reductive pentose phosphate cycle (Calvin cycle) [PATH:pmm00710 pmm01200 pmm01100 pmm01120]

Methane metabolism
Nitrogen metabolism
Sulfur metabolism
M00176 Assimilatory sulfate reduction, sulfate => H2S [PATH:pmm00920 pmm01100 pmm01120]

Photosynthesis
M00161 Photosystem II [PATH:pmm00195 pmm01100]
M00163 Photosystem I [PATH:pmm00195 pmm01100]

ATP synthesis
M00145 NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:pmm00190 pmm01100]
M00155 Cytochrome c oxidase, prokaryotes [PATH:pmm00190 pmm01100]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH:pmm00190 pmm00195 pmm01100]

Lipid metabolism
Fatty acid metabolism
M00082 Fatty acid biosynthesis, initiation [PATH:pmm00061 pmm01212 pmm01100]
M00083 Fatty acid biosynthesis, elongation [PATH:pmm00061 pmm01212 pmm01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:pmm00061 pmm00071 pmm01212 pmm01100]

Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pmm00230 pmm01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pmm00230 pmm01232 pmm01240 pmm01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pmm00230 pmm01232 pmm01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pmm00240 pmm01232 pmm01240 pmm01100]

Amino acid metabolism
Serine and threonine metabolism
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pmm00260 pmm01230 pmm01100 pmm01110]
M00621 Glycine cleavage system [PATH:pmm00260 pmm00630 pmm00785 pmm01200 pmm01100]

Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine [PATH:pmm00270 pmm00920 pmm01200 pmm01230 pmm01100 pmm01110]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pmm00290 pmm00770 pmm01210 pmm01230 pmm01100 pmm01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pmm00290 pmm01230 pmm01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pmm00290 pmm01210 pmm01230 pmm01100 pmm01110]

Lysine metabolism
M00527 Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:pmm00300 pmm01230 pmm01100 pmm01110]

Arginine and proline metabolism
M00028 Ornithine biosynthesis, glutamate => ornithine [PATH:pmm00220 pmm01210 pmm01230 pmm01100]
M00844 Arginine biosynthesis, ornithine => arginine [PATH:pmm00220 pmm01230 pmm01100]
M00015 Proline biosynthesis, glutamate => proline [PATH:pmm00330 pmm01230 pmm01100]

Polyamine biosynthesis
M00133 Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:pmm00330 pmm01100]

Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pmm00760 pmm01240 pmm01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pmm00770 pmm01240 pmm01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pmm00780 pmm01240 pmm01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pmm00780 pmm01240 pmm01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pmm00785 pmm01240 pmm01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pmm00860 pmm01240 pmm01100 pmm01110]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
M00097 beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:pmm00906 pmm01100 pmm01110]

Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00611 Oxygenic photosynthesis in plants and cyanobacteria