KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ppr00010 ppr01200 ppr01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ppr00010 ppr01200 ppr01230 ppr01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ppr00010 ppr00020 ppr01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ppr00010 ppr00020 ppr00620 ppr00785 ppr01200 ppr01210 ppr01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ppr00020 ppr01200 ppr01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ppr00020 ppr01200 ppr01210 ppr01230 ppr01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ppr00020 ppr01200 ppr01210 ppr01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ppr00030 ppr01200 ppr01100 ppr01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ppr00030 ppr01200 ppr01100 ppr01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ppr00030 ppr01200 ppr01230 ppr01100 ppr01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: ppr00030 ppr01200 ppr01230 ppr01100 ppr01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ppr00030 ppr00230 ppr01200 ppr01230 ppr01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: ppr00030 ppr01200 ppr01100 ppr01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: ppr00040 ppr01100]
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH: ppr00040 ppr00030 ppr01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: ppr00040 ppr00030 ppr01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: ppr00052 ppr01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH: ppr00052 ppr01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH: ppr00053 ppr01100 ppr01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: ppr00500 ppr01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: ppr00500 ppr01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: ppr00520 ppr01250 ppr01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: ppr00520 ppr00052 ppr01250 ppr01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: ppr00520 ppr01250 ppr01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: ppr00520 ppr01250 ppr01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH: ppr00520 ppr01100]
M00012 Glyoxylate cycle [PATH: ppr00630 ppr01200 ppr01100 ppr01110]
M00373 Ethylmalonyl pathway [PATH: ppr00630 ppr01200 ppr01100 ppr01120]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: ppr00280 ppr00630 ppr00640 ppr01200 ppr01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: ppr00562 ppr01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: ppr00562 ppr01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: ppr00562 ppr01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00101 Cholesterol biosynthesis, FPP => cholesterol [PATH: ppr01100]
M00103 Cholecalciferol biosynthesis [PATH: ppr01100]
M00107 Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH: ppr01100]
M00109 C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH: ppr01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH: ppr01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH: ppr01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: ppr00400 ppr01230 ppr01100 ppr01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: ppr00400 ppr01230 ppr01100 ppr01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: ppr00400 ppr01230 ppr01100 ppr01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH: ppr00400 ppr01230 ppr01100]
M00040 Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH: ppr00400 ppr01230 ppr01100 ppr01110]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: ppr00350 ppr01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: ppr00350 ppr01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: ppr00350 ppr01100]
M00533 Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH: ppr00350 ppr01220 ppr01100 ppr01120]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: ppr00380 ppr01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: ppr00380 ppr01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00055 N-glycan precursor biosynthesis [PATH: ppr01100]
M00073 N-glycan precursor trimming [PATH: ppr01100]
M00075 N-glycan biosynthesis, complex type [PATH: ppr01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH: ppr01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH: ppr01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH: ppr01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH: ppr01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:ppr00730 ppr01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ppr00740 ppr01240 ppr01100 ppr01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ppr00750 ppr01240 ppr01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:ppr00750 ppr01240 ppr01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ppr00760 ppr01240 ppr01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:ppr00380 ppr00760 ppr01240 ppr01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ppr00770 ppr01240 ppr01100 ppr01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:ppr00770 ppr01240 ppr01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:ppr00780 ppr01240 ppr01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ppr00780 ppr01240 ppr01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ppr00785 ppr01240 ppr01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:ppr00785 ppr01240 ppr01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:ppr00785 ppr01240 ppr01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:ppr00790 ppr00670 ppr01240 ppr01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:ppr00790 ppr01240 ppr01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ppr00790 ppr01240 ppr01100]
M00140 C1-unit interconversion, prokaryotes [PATH:ppr00670 ppr01240 ppr01100]
M00141 C1-unit interconversion, eukaryotes [PATH:ppr00670 ppr01240 ppr01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ppr00860 ppr01240 ppr01100 ppr01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:ppr00860 ppr01240 ppr01100 ppr01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ppr00860 ppr01240 ppr01100 ppr01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:ppr00860 ppr01240 ppr01100]
M00847 Heme biosynthesis, archaea, siroheme => heme [PATH:ppr00860 ppr01240 ppr01100 ppr01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:ppr00860 ppr01240 ppr01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ppr00860 ppr01240 ppr01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ppr00130 ppr01240 ppr01100 ppr01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:ppr00130 ppr01240 ppr01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ppr00130 ppr01240 ppr01100 ppr01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH:ppr00130 ppr01240 ppr01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
|
|