KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: psa00010 psa01200 psa01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: psa00010 psa01200 psa01230 psa01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: psa00010 psa00020 psa01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: psa00010 psa00020 psa00620 psa00785 psa01200 psa01210 psa01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: psa00020 psa01200 psa01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: psa00020 psa01200 psa01210 psa01230 psa01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: psa00020 psa01200 psa01210 psa01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: psa00030 psa01200 psa01100 psa01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: psa00030 psa01200 psa01100 psa01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: psa00030 psa01200 psa01230 psa01100 psa01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: psa00030 psa01200 psa01230 psa01100 psa01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: psa00030 psa00230 psa01200 psa01230 psa01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: psa00030 psa01200 psa01100 psa01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:psa00040 psa00030 psa01100]
M00081 Pectin degradation [PATH:psa00040 psa01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:psa00052 psa01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:psa00052 psa01100]
M00114 Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:psa00051 psa00053 psa01240 psa01100 psa01110]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:psa00500 psa01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:psa00500 psa01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:psa00500 psa01100 psa01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:psa00520 psa01250 psa01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:psa00520 psa00052 psa01250 psa01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:psa00520 psa01250 psa01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:psa00520 psa01250 psa01100]
M00012 Glyoxylate cycle [PATH:psa00630 psa01200 psa01100 psa01110]
M00373 Ethylmalonyl pathway [PATH:psa00630 psa01200 psa01100 psa01120]
M00532 Photorespiration [PATH:psa00630 psa01200 psa01100 psa01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:psa00280 psa00630 psa00640 psa01200 psa01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:psa00562 psa01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00897 Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:psa00730 psa01240 psa01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:psa00730 psa01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:psa00740 psa01240 psa01100 psa01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:psa00750 psa01240 psa01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:psa00750 psa01240 psa01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:psa00760 psa01240 psa01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:psa00770 psa01240 psa01100 psa01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:psa00770 psa01240 psa01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:psa00780 psa01240 psa01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:psa00780 psa01240 psa01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:psa00785 psa01240 psa01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:psa00785 psa01240 psa01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:psa00790 psa00670 psa01240 psa01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:psa00790 psa01240 psa01100]
M00140 C1-unit interconversion, prokaryotes [PATH:psa00670 psa01240 psa01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:psa00860 psa01240 psa01100 psa01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:psa00860 psa01240 psa01100 psa01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:psa00860 psa01240 psa01100]
M00847 Heme biosynthesis, archaea, siroheme => heme [PATH:psa00860 psa01240 psa01100 psa01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:psa00860 psa01240 psa01100]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:psa00860 psa01240 psa01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:psa00860 psa01240 psa01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:psa00130 psa01240 psa01100 psa01110]
M00932 Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:psa00130 psa01240 psa01100 psa01110]
M00112 Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:psa00130 psa01240 psa01100 psa01110]
M00933 Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:psa00130 psa01240 psa01100 psa01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00639 Multidrug resistance, efflux pump MexCD-OprJ
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
M00698 Multidrug resistance, efflux pump BpeEF-OprC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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