KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: pst00010 pst01200 pst01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: pst00010 pst01200 pst01230 pst01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: pst00010 pst00020 pst01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: pst00010 pst00020 pst00620 pst00785 pst01200 pst01210 pst01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: pst00020 pst01200 pst01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: pst00020 pst01200 pst01210 pst01230 pst01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: pst00020 pst01200 pst01210 pst01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: pst00030 pst01200 pst01100 pst01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: pst00030 pst01200 pst01100 pst01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: pst00030 pst01200 pst01230 pst01100 pst01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: pst00030 pst01200 pst01230 pst01100 pst01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: pst00030 pst00230 pst01200 pst01230 pst01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: pst00030 pst01200 pst01100 pst01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:pst00040 pst00030 pst01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pst00040 pst00030 pst01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pst00052 pst01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pst00052 pst01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pst00500 pst01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:pst00500 pst01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:pst00500 pst01100 pst01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pst00520 pst01250 pst01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pst00520 pst00052 pst01250 pst01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:pst00520 pst01250 pst01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pst00520 pst01250 pst01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pst00520 pst01100]
M00012 Glyoxylate cycle [PATH:pst00630 pst01200 pst01100 pst01110]
M00373 Ethylmalonyl pathway [PATH:pst00630 pst01200 pst01100 pst01120]
M00013 Malonate semialdehyde pathway, propanoyl-CoA => acetyl-CoA [PATH:pst00410 pst00640 pst01200 pst01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:pst00280 pst00630 pst00640 pst01200 pst01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: pst00730 pst01240 pst01100]
M00898 Thiamine biosynthesis, pyridoxal-5P => TMP/thiamine/TPP [PATH: pst00730 pst01240 pst01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: pst00730 pst01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: pst00740 pst01240 pst01100 pst01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: pst00750 pst01240 pst01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: pst00750 pst01240 pst01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: pst00760 pst01240 pst01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH: pst00380 pst00760 pst01240 pst01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: pst00770 pst01240 pst01100 pst01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: pst00770 pst01240 pst01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: pst00780 pst01240 pst01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: pst00780 pst01240 pst01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: pst00785 pst01240 pst01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH: pst00785 pst01240 pst01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: pst00790 pst00670 pst01240 pst01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: pst00790 pst01240 pst01100]
M00140 C1-unit interconversion, prokaryotes [PATH: pst00670 pst01240 pst01100]
M00141 C1-unit interconversion, eukaryotes [PATH: pst00670 pst01240 pst01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: pst00860 pst01240 pst01100 pst01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: pst00860 pst01240 pst01100 pst01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: pst00860 pst01240 pst01100]
M00847 Heme biosynthesis, archaea, siroheme => heme [PATH: pst00860 pst01240 pst01100 pst01110]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH: pst00860 pst01240 pst01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: pst00860 pst01240 pst01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: pst00130 pst01240 pst01100 pst01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: pst00130 pst01240 pst01100 pst01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH: pst00130 pst01240 pst01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:pst01501]
M00745 Imipenem resistance, repression of porin OprD
M00639 Multidrug resistance, efflux pump MexCD-OprJ
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
M00705 Multidrug resistance, efflux pump MepA
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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