KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: sam00010 sam01200 sam01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: sam00010 sam01200 sam01230 sam01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: sam00010 sam00020 sam01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: sam00010 sam00020 sam00620 sam00785 sam01200 sam01210 sam01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: sam00020 sam01200 sam01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: sam00020 sam01200 sam01210 sam01230 sam01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: sam00020 sam01200 sam01210 sam01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: sam00030 sam01200 sam01100 sam01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: sam00030 sam01200 sam01100 sam01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: sam00030 sam01200 sam01230 sam01100 sam01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: sam00030 sam01200 sam01230 sam01100 sam01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: sam00030 sam00230 sam01200 sam01230 sam01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: sam00030 sam01200 sam01100 sam01120]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sam00040 sam00030 sam01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sam00052 sam01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sam00500 sam01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:sam00500 sam01100 sam01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sam00520 sam01250 sam01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sam00520 sam00052 sam01250 sam01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sam00520 sam01250 sam01100]
M00012 Glyoxylate cycle [PATH:sam00630 sam01200 sam01100 sam01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:sam00280 sam00630 sam00640 sam01200 sam01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:sam00730 sam01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sam00740 sam01240 sam01100 sam01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:sam00750 sam01240 sam01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sam00760 sam01240 sam01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:sam00770 sam01240 sam01100 sam01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:sam00770 sam01240 sam01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sam00780 sam01240 sam01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:sam00780 sam01240 sam01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sam00785 sam01240 sam01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:sam00785 sam01240 sam01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:sam00790 sam00670 sam01240 sam01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sam00790 sam01240 sam01100]
M00140 C1-unit interconversion, prokaryotes [PATH:sam00670 sam01240 sam01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:sam00860 sam01240 sam01100 sam01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:sam00860 sam01240 sam01100]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:sam00860 sam01240 sam01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:sam00860 sam01240 sam01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sam00130 sam01240 sam01100 sam01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH:sam00130 sam01240 sam01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:sam01501]
M00704 Tetracycline resistance, efflux pump Tet38
M00725 Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [PATH:sam01503]
M00726 Cationic antimicrobial peptide (CAMP) resistance, lysyl-phosphatidylglycerol (L-PG) synthase MprF [PATH:sam01503]
M00730 Cationic antimicrobial peptide (CAMP) resistance, VraFG transporter [PATH:sam01503]
M00700 Multidrug resistance, efflux pump AbcA
M00702 Multidrug resistance, efflux pump NorB
M00705 Multidrug resistance, efflux pump MepA
Plant pathogenicity
Symbiosis
Module set
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