KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: saw00010 saw01200 saw01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: saw00010 saw01200 saw01230 saw01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: saw00010 saw00020 saw01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: saw00010 saw00020 saw00620 saw00785 saw01200 saw01210 saw01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: saw00020 saw01200 saw01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: saw00020 saw01200 saw01210 saw01230 saw01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: saw00020 saw01200 saw01210 saw01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: saw00030 saw01200 saw01100 saw01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: saw00030 saw01200 saw01100 saw01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: saw00030 saw01200 saw01230 saw01100 saw01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: saw00030 saw01200 saw01230 saw01100 saw01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: saw00030 saw00230 saw01200 saw01230 saw01100]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:saw00730 saw01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:saw00740 saw01240 saw01100 saw01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:saw00750 saw01240 saw01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:saw00770 saw01240 saw01100 saw01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:saw00770 saw01240 saw01100]
M00914 Coenzyme A biosynthesis, archaea, 2-oxoisovalerate => 4-phosphopantoate => CoA [PATH:saw00770 saw01240 saw01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:saw00780 saw01240 saw01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:saw00780 saw01240 saw01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:saw00785 saw01240 saw01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:saw00790 saw00670 saw01240 saw01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:saw00790 saw01240 saw01100]
M00140 C1-unit interconversion, prokaryotes [PATH:saw00670 saw01240 saw01100]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:saw00860 saw01240 saw01100]
M00847 Heme biosynthesis, archaea, siroheme => heme [PATH:saw00860 saw01240 saw01100 saw01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:saw00130 saw01240 saw01100 saw01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00625 Methicillin resistance [PATH:saw01501]
M00704 Tetracycline resistance, efflux pump Tet38
M00725 Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [PATH:saw01503]
M00726 Cationic antimicrobial peptide (CAMP) resistance, lysyl-phosphatidylglycerol (L-PG) synthase MprF [PATH:saw01503]
M00730 Cationic antimicrobial peptide (CAMP) resistance, VraFG transporter [PATH:saw01503]
M00700 Multidrug resistance, efflux pump AbcA
M00702 Multidrug resistance, efflux pump NorB
M00705 Multidrug resistance, efflux pump MepA
Plant pathogenicity
Symbiosis
Module set
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