KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ser00010 ser01200 ser01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ser00010 ser01200 ser01230 ser01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ser00010 ser00020 ser01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ser00010 ser00020 ser00620 ser00785 ser01200 ser01210 ser01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ser00020 ser01200 ser01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ser00020 ser01200 ser01210 ser01230 ser01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ser00020 ser01200 ser01210 ser01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ser00030 ser01200 ser01100 ser01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ser00030 ser01200 ser01100 ser01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ser00030 ser01200 ser01230 ser01100 ser01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: ser00030 ser01200 ser01230 ser01100 ser01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ser00030 ser00230 ser01200 ser01230 ser01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: ser00030 ser01200 ser01100 ser01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ser00040 ser00030 ser01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ser00040 ser00030 ser01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ser00052 ser01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:ser00052 ser01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:ser01100 ser01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ser00500 ser01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:ser00500 ser01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ser00520 ser01250 ser01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ser00520 ser00052 ser01250 ser01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ser00520 ser01250 ser01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ser00520 ser01100]
M00012 Glyoxylate cycle [PATH:ser00630 ser01200 ser01100 ser01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: ser00730 ser01240 ser01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: ser00730 ser01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: ser00740 ser01240 ser01100 ser01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: ser00750 ser01240 ser01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: ser00750 ser01240 ser01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: ser00760 ser01240 ser01100]
M00622 Nicotinate degradation, nicotinate => fumarate [PATH: ser00760 ser01100 ser01120]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: ser00770 ser01240 ser01100 ser01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: ser00770 ser01240 ser01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: ser00780 ser01240 ser01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: ser00780 ser01240 ser01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH: ser00780 ser01240 ser01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: ser00785 ser01240 ser01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: ser00785 ser01240 ser01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: ser00790 ser00670 ser01240 ser01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: ser00790 ser01240 ser01100]
M00140 C1-unit interconversion, prokaryotes [PATH: ser00670 ser01240 ser01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: ser00860 ser01240 ser01100 ser01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: ser00860 ser01240 ser01100 ser01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: ser00860 ser01240 ser01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: ser00860 ser01240 ser01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: ser00130 ser01240 ser01100 ser01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: ser00130 ser01240 ser01100 ser01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
M00675 Carbapenem-3-carboxylate biosynthesis, pyrroline-5-carboxylate + malonyl-CoA => carbapenem-3-carboxylate [PATH:ser01100 ser01110]
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00625 Methicillin resistance [PATH:ser01501]
M00627 beta-Lactam resistance, Bla system [PATH:ser01501]
M00725 Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [PATH:ser01503]
M00726 Cationic antimicrobial peptide (CAMP) resistance, lysyl-phosphatidylglycerol (L-PG) synthase MprF [PATH:ser01503]
M00730 Cationic antimicrobial peptide (CAMP) resistance, VraFG transporter [PATH:ser01503]
M00649 Multidrug resistance, efflux pump AdeABC [PATH:ser01501]
M00700 Multidrug resistance, efflux pump AbcA
M00702 Multidrug resistance, efflux pump NorB
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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