KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: spi00010 spi01200 spi01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: spi00010 spi01200 spi01230 spi01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: spi00010 spi00020 spi01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: spi00010 spi00020 spi00620 spi00785 spi01200 spi01210 spi01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: spi00020 spi01200 spi01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: spi00020 spi01200 spi01210 spi01230 spi01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: spi00020 spi01200 spi01210 spi01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: spi00030 spi01200 spi01100 spi01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: spi00030 spi01200 spi01100 spi01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: spi00030 spi01200 spi01230 spi01100 spi01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: spi00030 spi01200 spi01230 spi01100 spi01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: spi00030 spi00230 spi01200 spi01230 spi01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: spi00030 spi01200 spi01100 spi01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: spi00040 spi01100]
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH: spi00040 spi00030 spi01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: spi00040 spi00030 spi01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: spi00052 spi01100]
M00129 Ascorbate biosynthesis, animals, glucose-1P => ascorbate [PATH: spi00040 spi00053 spi01240 spi01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH: spi00053 spi01100 spi01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: spi00500 spi01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: spi00500 spi01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: spi00520 spi01250 spi01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: spi00520 spi00052 spi01250 spi01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: spi00520 spi01250 spi01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: spi00520 spi01250 spi01100]
M00012 Glyoxylate cycle [PATH: spi00630 spi01200 spi01100 spi01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: spi00280 spi00630 spi00640 spi01200 spi01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: spi00562 spi01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: spi00562 spi01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: spi00562 spi01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:spi00730 spi01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:spi00740 spi01240 spi01100 spi01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:spi00750 spi01240 spi01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:spi00760 spi01240 spi01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:spi00380 spi00760 spi01240 spi01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:spi00770 spi01240 spi01100 spi01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:spi00770 spi01240 spi01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:spi00780 spi01240 spi01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:spi00785 spi01240 spi01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:spi00785 spi01240 spi01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:spi00785 spi01240 spi01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:spi00790 spi00670 spi01240 spi01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:spi00790 spi01240 spi01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:spi00790 spi01240 spi01100]
M00140 C1-unit interconversion, prokaryotes [PATH:spi00670 spi01240 spi01100]
M00141 C1-unit interconversion, eukaryotes [PATH:spi00670 spi01240 spi01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:spi01240 spi01100 spi01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:spi01240 spi01100 spi01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:spi01240 spi01100 spi01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:spi01240 spi01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:spi01240 spi01100]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:spi01240 spi01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:spi01240 spi01100 spi01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:spi01501]
M00725 Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [PATH:spi01503]
M00726 Cationic antimicrobial peptide (CAMP) resistance, lysyl-phosphatidylglycerol (L-PG) synthase MprF [PATH:spi01503]
M00730 Cationic antimicrobial peptide (CAMP) resistance, VraFG transporter [PATH:spi01503]
M00700 Multidrug resistance, efflux pump AbcA
M00702 Multidrug resistance, efflux pump NorB
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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