KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: spo00010 spo01200 spo01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: spo00010 spo01200 spo01230 spo01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: spo00010 spo00020 spo01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: spo00010 spo00020 spo00620 spo00785 spo01200 spo01210 spo01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: spo00020 spo01200 spo01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: spo00020 spo01200 spo01210 spo01230 spo01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: spo00020 spo01200 spo01210 spo01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: spo00030 spo01200 spo01100]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: spo00030 spo01200 spo01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: spo00030 spo01200 spo01230 spo01100]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: spo00030 spo00230 spo01200 spo01230 spo01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: spo00030 spo01200 spo01100]
Other carbohydrate metabolism
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:spo00040 spo00030 spo01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:spo00052 spo01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:spo00052 spo01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:spo00053 spo01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:spo00500 spo01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:spo00500 spo01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:spo00520 spo01250 spo01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:spo00520 spo00052 spo01250 spo01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:spo00520 spo01250 spo01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:spo00520 spo01250 spo01100]
M00012 Glyoxylate cycle [PATH:spo00630 spo01200 spo01100 spo01110]
M00373 Ethylmalonyl pathway [PATH:spo00630 spo01200 spo01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:spo00280 spo00630 spo00640 spo01200 spo01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: spo00730 spo01240 spo01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: spo00730 spo01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: spo00740 spo01240 spo01100 spo01110]
M00911 Riboflavin biosynthesis, fungi, GTP => riboflavin/FMN/FAD [PATH: spo00740 spo01240 spo01100]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: spo00750 spo01240 spo01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: spo00750 spo01240 spo01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: spo00760 spo01240 spo01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: spo00770 spo01240 spo01100 spo01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: spo00770 spo01240 spo01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: spo00780 spo01240 spo01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: spo00785 spo01240 spo01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH: spo00785 spo01240 spo01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: spo00785 spo01240 spo01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: spo00790 spo00670 spo01240 spo01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: spo00790 spo01240 spo01100]
M00140 C1-unit interconversion, prokaryotes [PATH: spo00670 spo01240 spo01100]
M00141 C1-unit interconversion, eukaryotes [PATH: spo00670 spo01240 spo01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: spo00860 spo01240 spo01100 spo01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH: spo00860 spo01240 spo01100 spo01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: spo00860 spo01240 spo01100 spo01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: spo00860 spo01240 spo01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: spo00860 spo01240 spo01100]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH: spo00860 spo01240 spo01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: spo00860 spo01240 spo01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: spo00130 spo01240 spo01100 spo01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH: spo00130 spo01240 spo01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: spo00130 spo01240 spo01100 spo01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation
M00569 Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA [PATH:spo01100]
Signature modules
Gene set
Pathogenicity
Drug resistance
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
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