KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ssc00010 ssc01200 ssc01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ssc00010 ssc01200 ssc01230 ssc01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ssc00010 ssc00020 ssc01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ssc00010 ssc00020 ssc00620 ssc00785 ssc01200 ssc01210 ssc01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ssc00020 ssc01200 ssc01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ssc00020 ssc01200 ssc01210 ssc01230 ssc01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ssc00020 ssc01200 ssc01210 ssc01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ssc00030 ssc01200 ssc01100]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ssc00030 ssc01200 ssc01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ssc00030 ssc01200 ssc01230 ssc01100]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: ssc00030 ssc01200 ssc01230 ssc01100]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ssc00030 ssc00230 ssc01200 ssc01230 ssc01100]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: ssc00040 ssc01100]
M00081 Pectin degradation [PATH: ssc00040 ssc01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: ssc00052 ssc01100]
M00129 Ascorbate biosynthesis, animals, glucose-1P => ascorbate [PATH: ssc00040 ssc00053 ssc01240 ssc01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: ssc00500 ssc01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: ssc00500 ssc01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: ssc00520 ssc01250 ssc01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: ssc00520 ssc00052 ssc01250 ssc01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: ssc00520 ssc01250 ssc01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: ssc00520 ssc01250 ssc01100]
M00012 Glyoxylate cycle [PATH: ssc00630 ssc01200 ssc01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: ssc00280 ssc00630 ssc00640 ssc01200 ssc01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: ssc00562 ssc01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: ssc00562 ssc01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: ssc00562 ssc01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: ssc00400 ssc01230 ssc01100]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: ssc00400 ssc01230 ssc01100]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: ssc00400 ssc01230 ssc01100]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH: ssc00400 ssc01230 ssc01100]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: ssc00350 ssc01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: ssc00350 ssc01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: ssc00350 ssc01100]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: ssc00380 ssc01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: ssc00380 ssc01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00055 N-glycan precursor biosynthesis [PATH: ssc00510 ssc01100]
M00072 N-glycosylation by oligosaccharyltransferase [PATH: ssc00510 ssc00513 ssc01100]
M00073 N-glycan precursor trimming [PATH: ssc00510 ssc01100]
M00075 N-glycan biosynthesis, complex type [PATH: ssc00510 ssc01100]
M00056 O-glycan biosynthesis, mucin type core [PATH: ssc00512 ssc01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH: ssc00515 ssc01100]
M00065 GPI-anchor biosynthesis, core oligosaccharide [PATH: ssc00563 ssc01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH: ssc00601 ssc01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH: ssc00601 ssc01100]
M00068 Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer [PATH: ssc00603 ssc01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH: ssc00604 ssc01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:ssc00730 ssc01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ssc00740 ssc01240 ssc01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:ssc00750 ssc01240 ssc01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ssc00760 ssc01240 ssc01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:ssc00380 ssc00760 ssc01240 ssc01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ssc00770 ssc01240 ssc01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:ssc00770 ssc01240 ssc01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ssc00780 ssc01240 ssc01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:ssc00780 ssc01240 ssc01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:ssc00785 ssc01240 ssc01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:ssc00785 ssc01240 ssc01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:ssc00790 ssc01240 ssc01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ssc00790 ssc01240 ssc01100]
M00140 C1-unit interconversion, prokaryotes [PATH:ssc00670 ssc01240 ssc01100]
M00141 C1-unit interconversion, eukaryotes [PATH:ssc00670 ssc01240 ssc01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ssc00860 ssc01240 ssc01100]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:ssc00860 ssc01240 ssc01100]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:ssc00860 ssc01240 ssc01100]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:ssc00130 ssc01240 ssc01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ssc00130 ssc01240 ssc01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
M00876 Staphyloferrin A biosynthesis, L-ornithine => staphyloferrin A [PATH:ssc01100]
M00875 Staphyloferrin B biosynthesis, L-serine => staphyloferrin B [PATH:ssc01100]
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00704 Tetracycline resistance, efflux pump Tet38
M00700 Multidrug resistance, efflux pump AbcA
Plant pathogenicity
Symbiosis
Module set
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