KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: sse00010 sse01200 sse01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: sse00010 sse01200 sse01230 sse01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: sse00010 sse00020 sse01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: sse00010 sse00020 sse00620 sse00785 sse01200 sse01210 sse01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: sse00020 sse01200 sse01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: sse00020 sse01200 sse01210 sse01230 sse01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: sse00020 sse01200 sse01210 sse01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: sse00030 sse01200 sse01100 sse01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: sse00030 sse01200 sse01100 sse01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: sse00030 sse01200 sse01230 sse01100 sse01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: sse00030 sse00230 sse01200 sse01230 sse01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: sse00030 sse01200 sse01100 sse01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: sse00040 sse01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: sse00052 sse01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: sse00500 sse01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: sse00500 sse01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: sse00520 sse01250 sse01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: sse00520 sse00052 sse01250 sse01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: sse00520 sse01250 sse01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: sse00520 sse01250 sse01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH: sse00520 sse01100]
M00012 Glyoxylate cycle [PATH: sse00630 sse01200 sse01100 sse01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: sse00280 sse00630 sse00640 sse01200 sse01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: sse00562 sse01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: sse00562 sse01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: sse00562 sse01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00101 Cholesterol biosynthesis, FPP => cholesterol [PATH: sse01100]
M00103 Cholecalciferol biosynthesis [PATH: sse01100]
M00107 Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH: sse01100]
M00109 C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH: sse01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH: sse01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH: sse01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: sse00400 sse01230 sse01100 sse01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: sse00400 sse01230 sse01100 sse01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: sse00400 sse01230 sse01100 sse01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH: sse00400 sse01230 sse01100]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: sse00350 sse01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: sse00350 sse01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: sse00350 sse01100]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: sse00380 sse01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: sse00380 sse01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00055 N-glycan precursor biosynthesis [PATH: sse01100]
M00073 N-glycan precursor trimming [PATH: sse01100]
M00075 N-glycan biosynthesis, complex type [PATH: sse01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH: sse01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH: sse01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH: sse01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH: sse01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: sse00730 sse01240 sse01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: sse00740 sse01240 sse01100 sse01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: sse00750 sse01240 sse01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: sse00750 sse01240 sse01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: sse00760 sse01240 sse01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH: sse00380 sse00760 sse01240 sse01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: sse00770 sse01240 sse01100 sse01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: sse00770 sse01240 sse01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: sse00780 sse01240 sse01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: sse00785 sse01240 sse01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH: sse00785 sse01240 sse01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: sse00785 sse01240 sse01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: sse00790 sse00670 sse01240 sse01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH: sse00790 sse01240 sse01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: sse00790 sse01240 sse01100]
M00140 C1-unit interconversion, prokaryotes [PATH: sse00670 sse01240 sse01100]
M00141 C1-unit interconversion, eukaryotes [PATH: sse00670 sse01240 sse01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: sse00860 sse01240 sse01100 sse01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: sse00860 sse01240 sse01100 sse01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: sse00860 sse01240 sse01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: sse00860 sse01240 sse01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: sse00130 sse01240 sse01100 sse01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH: sse00130 sse01240 sse01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: sse00130 sse01240 sse01100 sse01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH: sse00130 sse01240 sse01100]
M00931 Menaquinone biosynthesis, modified futalosine pathway [PATH: sse00130 sse01240 sse01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
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