KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ssi00010 ssi01200 ssi01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ssi00010 ssi01200 ssi01230 ssi01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ssi00010 ssi00020 ssi01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ssi00010 ssi00020 ssi00620 ssi00785 ssi01200 ssi01210 ssi01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ssi00020 ssi01200 ssi01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ssi00020 ssi01200 ssi01210 ssi01230 ssi01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ssi00020 ssi01200 ssi01210 ssi01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ssi00030 ssi01200 ssi01100 ssi01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ssi00030 ssi01200 ssi01100 ssi01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ssi00030 ssi01200 ssi01230 ssi01100 ssi01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: ssi00030 ssi01200 ssi01230 ssi01100 ssi01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ssi00030 ssi00230 ssi01200 ssi01230 ssi01100]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ssi00040 ssi00030 ssi01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ssi00052 ssi01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:ssi00052 ssi01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:ssi00053 ssi01100 ssi01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ssi00500 ssi01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:ssi00500 ssi01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ssi00520 ssi01250 ssi01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ssi00520 ssi00052 ssi01250 ssi01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ssi00520 ssi01250 ssi01100]
M00012 Glyoxylate cycle [PATH:ssi00630 ssi01200 ssi01100 ssi01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:ssi00280 ssi00630 ssi00640 ssi01200 ssi01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:ssi00730 ssi01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ssi00740 ssi01240 ssi01100 ssi01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:ssi00750 ssi01240 ssi01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ssi00760 ssi01240 ssi01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ssi00770 ssi01240 ssi01100 ssi01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:ssi00770 ssi01240 ssi01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ssi00780 ssi01240 ssi01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ssi00785 ssi01240 ssi01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:ssi00785 ssi01240 ssi01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:ssi00790 ssi00670 ssi01240 ssi01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ssi00790 ssi01240 ssi01100]
M00140 C1-unit interconversion, prokaryotes [PATH:ssi00670 ssi01240 ssi01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ssi01240 ssi01100 ssi01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ssi01240 ssi01100 ssi01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:ssi01240 ssi01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:ssi01240 ssi01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ssi01240 ssi01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ssi00130 ssi01240 ssi01100 ssi01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH:ssi00130 ssi01240 ssi01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:ssi01501]
M00725 Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [PATH:ssi01503]
M00726 Cationic antimicrobial peptide (CAMP) resistance, lysyl-phosphatidylglycerol (L-PG) synthase MprF [PATH:ssi01503]
M00730 Cationic antimicrobial peptide (CAMP) resistance, VraFG transporter [PATH:ssi01503]
M00700 Multidrug resistance, efflux pump AbcA
M00702 Multidrug resistance, efflux pump NorB
M00705 Multidrug resistance, efflux pump MepA
Plant pathogenicity
Symbiosis
Module set
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