KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: tca00010 tca01200 tca01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: tca00010 tca01200 tca01230 tca01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: tca00010 tca00020 tca01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: tca00010 tca00020 tca00620 tca00785 tca01200 tca01210 tca01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: tca00020 tca01200 tca01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: tca00020 tca01200 tca01210 tca01230 tca01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: tca00020 tca01200 tca01210 tca01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: tca00030 tca01200 tca01100]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: tca00030 tca01200 tca01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: tca00030 tca01200 tca01230 tca01100]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: tca00030 tca00230 tca01200 tca01230 tca01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: tca00030 tca01200 tca01100]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: tca00040 tca01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: tca00052 tca01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH: tca00052 tca01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: tca00500 tca01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: tca00500 tca01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: tca00520 tca01250 tca01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: tca00520 tca00052 tca01250 tca01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: tca00520 tca01250 tca01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: tca00520 tca01250 tca01100]
M00012 Glyoxylate cycle [PATH: tca00630 tca01200 tca01100]
M00013 Malonate semialdehyde pathway, propanoyl-CoA => acetyl-CoA [PATH: tca00410 tca00640 tca01200 tca01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: tca00562 tca01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: tca00562 tca01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:tca00760 tca01240 tca01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:tca00770 tca01240 tca01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:tca00770 tca01240 tca01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:tca00780 tca01240 tca01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:tca00785 tca01240 tca01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:tca00785 tca01240 tca01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:tca00785 tca01240 tca01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:tca00790 tca00670 tca01240 tca01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:tca00790 tca01240 tca01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:tca00790 tca01240 tca01100]
M00141 C1-unit interconversion, eukaryotes [PATH:tca00670 tca01240 tca01100]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:tca00860 tca01240 tca01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:tca00860 tca01240 tca01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:tca00860 tca01240 tca01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:tca00130 tca01240 tca01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation
M00551 Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:tca01100]
M00637 Anthranilate degradation, anthranilate => catechol [PATH:tca01100]
M00568 Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:tca01100]
Signature modules
Gene set
Pathogenicity
Drug resistance
M00698 Multidrug resistance, efflux pump BpeEF-OprC
Plant pathogenicity
Symbiosis
Module set
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