Bacteria |
Enterobacteria |
Salmonella |
Salmonella enterica |
50/51 |
Salmonella bongori |
3/ 3 |
Salmonella sp. SSDFZ69 |
1/ 1 |
Enterobacter |
Enterobacter cloacae |
1/ 7 |
Klebsiella |
Klebsiella oxytoca |
1/ 3 |
Yersinia |
Yersinia mollaretii |
1/ 1 |
Serratia |
Serratia marcescens |
4/ 4 |
Serratia sp. FS14 |
1/ 1 |
Serratia sp. SCBI |
1/ 1 |
Serratia surfactantfaciens |
1/ 1 |
Serratia ureilytica |
1/ 1 |
Serratia nematodiphila |
1/ 1 |
Serratia nevei |
1/ 1 |
Photorhabdus |
Photorhabdus asymbiotica |
1/ 1 |
Photorhabdus akhurstii |
1/ 1 |
Photorhabdus luminescens |
1/ 2 |
Xenorhabdus |
Xenorhabdus doucetiae |
1/ 1 |
Xenorhabdus hominickii |
1/ 1 |
Providencia |
Providencia alcalifaciens |
1/ 1 |
Arsenophonus |
Arsenophonus nasoniae |
1/ 1 |
Arsenophonus endosymbiont of Aphis craccivora |
1/ 1 |
Arsenophonus apicola |
1/ 2 |
Edwardsiella |
Edwardsiella ictaluri |
1/ 1 |
Edwardsiella tarda |
1/ 1 |
Edwardsiella anguillarum |
1/ 1 |
Edwardsiella piscicida |
2/ 2 |
Edwardsiella sp. EA181011 |
1/ 1 |
Edwardsiella sp. LADL05-105 |
1/ 1 |
Edwardsiella hoshinae |
1/ 1 |
Other Gammaproteobacteria |
Xanthomonas |
Xanthomonas translucens |
1/ 1 |
Xanthomonas vesicatoria |
1/ 1 |
Xanthomonas hortorum |
2/ 2 |
Xanthomonas arboricola |
1/ 1 |
Xanthomonas hyacinthi |
1/ 1 |
Xanthomonas theicola |
1/ 1 |
Xanthomonas euroxanthea |
1/ 1 |
Xanthomonas sp. GW |
1/ 1 |
Xanthomonas sp. SS |
1/ 1 |
Stenotrophomonas |
Stenotrophomonas maltophilia |
2/ 5 |
Stenotrophomonas sp. KCTC 12332 |
1/ 1 |
Stenotrophomonas pavanii |
1/ 1 |
Pseudoxanthomonas |
Pseudoxanthomonas suwonensis |
2/ 2 |
Pseudoxanthomonas mexicana |
1/ 1 |
Pseudoxanthomonas japonensis |
1/ 1 |
Pseudoxanthomonas winnipegensis |
1/ 1 |
Lysobacter |
Lysobacter antibioticus |
2/ 2 |
Lysobacter capsici |
1/ 1 |
Lysobacter gummosus |
1/ 1 |
Lysobacter enzymogenes |
2/ 3 |
Lysobacter soli |
1/ 1 |
Lysobacter auxotrophicus |
1/ 1 |
Lysobacter yananisis |
1/ 1 |
Vibrio |
Vibrio nigripulchritudo |
1/ 1 |
Pseudomonas |
Pseudomonas aeruginosa |
1/23 |
Pseudomonas multiresinivorans |
1/ 1 |
Pseudomonas nitroreducens |
1/ 2 |
Pseudomonas protegens |
3/ 3 |
Pseudomonas entomophila |
1/ 1 |
Pseudomonas sp. ATCC 13867 |
1/ 1 |
Pseudomonas chlororaphis |
4/ 5 |
Pseudomonas sp. MRSN 12121 |
1/ 1 |
Pseudomonas sp. Os17 |
1/ 1 |
Pseudomonas antarctica |
1/ 1 |
Pseudomonas sessilinigenes |
1/ 1 |
Pseudomonas piscis |
1/ 1 |
Pseudomonas vanderleydeniana |
1/ 1 |
Pseudomonas tructae |
1/ 1 |
Pseudomonas triclosanedens |
1/ 1 |
Halopseudomonas |
Pseudomonas denitrificans (nom. rej.) |
1/ 2 |
Acinetobacter |
Acinetobacter baumannii |
1/22 |
Acinetobacter pittii |
1/ 2 |
Acinetobacter genomosp. 13 |
1/ 1 |
Acinetobacter haemolyticus |
2/ 2 |
Acinetobacter dispersus |
2/ 2 |
Acinetobacter variabilis |
1/ 2 |
Acinetobacter gyllenbergii |
1/ 1 |
Acinetobacter proteolyticus |
1/ 2 |
Acinetobacter colistiniresistens |
2/ 2 |
Acinetobacter vivianii |
1/ 2 |
Acinetobacter higginsii |
1/ 1 |
Acinetobacter sp. 631 |
1/ 1 |
Acinetobacter sp. 640 |
1/ 1 |
Acinetobacter sp. BM2722 |
1/ 1 |
Acinetobacter sp. CIP-A165 |
1/ 1 |
Thalassomonas |
Thalassomonas viridans |
1/ 1 |
Hahella |
Hahella chejuensis |
1/ 2 |
Hahella sp. KA22 |
1/ 1 |
Hahella sp. HNIBRBA332 |
1/ 1 |
Halomonas |
Halomonas huangheensis |
1/ 1 |
Marinomonas |
Marinomonas sp. MWYL1 |
1/ 1 |
Marinomonas posidonica |
1/ 1 |
Marinomonas arctica |
1/ 1 |
Marinomonas foliarum |
1/ 1 |
Marinomonas rhizomae |
1/ 1 |
Gynuella |
Gynuella sunshinyii |
1/ 1 |
Aeromonas |
Aeromonas hydrophila |
8/10 |
Aeromonas salmonicida |
1/ 3 |
Aeromonas veronii |
1/ 2 |
Aeromonas sp. CU5 |
1/ 1 |
Aeromonas sp. 2692-1 |
1/ 1 |
Aeromonas bestiarum |
1/ 1 |
Betaproteobacteria |
Chromobacterium |
Chromobacterium violaceum |
1/ 1 |
Chromobacterium vaccinii |
1/ 1 |
Chromobacterium sp. ATCC 53434 |
1/ 1 |
Chromobacterium phragmitis |
2/ 2 |
Chromobacterium rhizoryzae |
1/ 1 |
Chromobacterium paludis |
1/ 1 |
Chromobacterium haemolyticum |
1/ 1 |
Iodobacter |
Iodobacter fluviatilis |
1/ 1 |
Burkholderia |
Burkholderia mallei |
11/11 |
Burkholderia pseudomallei |
13/17 |
Burkholderia oklahomensis |
2/ 2 |
Burkholderia mayonis |
1/ 1 |
Burkholderia savannae |
1/ 1 |
Burkholderia plantarii |
1/ 2 |
Paraburkholderia |
Paraburkholderia terricola |
1/ 1 |
Paraburkholderia megapolitana |
1/ 1 |
Pandoraea |
Pandoraea pulmonicola |
1/ 2 |
Pandoraea sputorum |
1/ 2 |
Pandoraea apista |
1/ 2 |
Pandoraea oxalativorans |
1/ 1 |
Pandoraea faecigallinarum |
1/ 1 |
Pandoraea fibrosis |
1/ 1 |
Pandoraea commovens |
1/ 1 |
Paucimonas |
Paucimonas lemoignei |
1/ 1 |
Trinickia |
Trinickia caryophylli |
1/ 1 |
Bordetella |
Bordetella hinzii |
1/ 1 |
Achromobacter |
Achromobacter xylosoxidans |
1/ 5 |
Achromobacter insolitus |
1/ 1 |
Achromobacter aegrifaciens |
1/ 1 |
Rubrivivax |
Rubrivivax gelatinosus |
1/ 1 |
Roseateles |
Roseateles sp. DAIF2 |
1/ 1 |
Janthinobacterium |
Janthinobacterium sp. B9-8 |
1/ 1 |
Massilia |
Massilia varians |
1/ 1 |
Pseudoduganella |
Pseudoduganella albidiflava |
1/ 1 |
Pseudoduganella umbonata |
1/ 1 |
Pseudoduganella lutea |
1/ 1 |
Usitatibacter |
Usitatibacter rugosus |
1/ 1 |
|
Betaproteobacteria bacterium GR16-43 |
1/ 1 |
Alphaproteobacteria |
Sinorhizobium |
Sinorhizobium medicae |
1/ 1 |
Sinorhizobium fredii |
1/ 3 |
Sinorhizobium sp. CCBAU 05631 |
1/ 1 |
Sinorhizobium numidicum |
1/ 1 |
Sinorhizobium garamanticum |
1/ 1 |
Ensifer |
Ensifer adhaerens |
1/ 3 |
Ensifer canadensis |
1/ 1 |
Ensifer sp. PDNC004 |
1/ 1 |
Agrobacterium |
Agrobacterium fabrum |
1/ 2 |
Agrobacterium tumefaciens |
3/ 4 |
Agrobacterium sp. RAC06 |
1/ 1 |
Agrobacterium sp. 33MFTa1.1 |
1/ 1 |
Agrobacterium salinitolerans |
1/ 1 |
Agrobacterium pusense |
2/ 2 |
Agrobacterium cucumeris |
1/ 1 |
Agrobacterium leguminum |
1/ 1 |
Allorhizobium |
Allorhizobium ampelinum |
1/ 1 |
Rhizobium |
Rhizobium leguminosarum |
2/ 4 |
Rhizobium tropici |
1/ 1 |
Rhizobium gallicum |
1/ 1 |
Rhizobium sp. S41 |
1/ 1 |
Rhizobium jaguaris |
1/ 1 |
Rhizobium sp. 11515TR |
1/ 1 |
Rhizobium grahamii |
1/ 1 |
Rhizobium acidisoli |
1/ 1 |
Rhizobium oryzihabitans |
1/ 1 |
Rhizobium hidalgonense |
1/ 1 |
Rhizobium binae |
1/ 1 |
Rhizobium lentis |
1/ 1 |
Rhizobium bangladeshense |
1/ 1 |
Rhizobium lusitanum |
1/ 1 |
Rhizobium rosettiformans |
1/ 1 |
Rhizobium anhuiense |
1/ 1 |
Rhizobium rhizogenes |
2/ 2 |
Rhizobium indigoferae |
1/ 1 |
Rhizobium sp. BT03 |
1/ 1 |
Pseudorhizobium |
Pseudorhizobium banfieldiae |
1/ 1 |
Pseudorhizobium flavum |
1/ 1 |
Peteryoungia |
Peteryoungia desertarenae |
1/ 1 |
Brucella |
Brucella intermedia |
1/ 1 |
Methylorubrum |
Methylorubrum extorquens |
4/ 4 |
Methylorubrum zatmanii |
1/ 1 |
Methylobacterium |
Methylobacterium sp. AMS5 |
1/ 1 |
Methylobacterium durans |
1/ 1 |
Microvirga |
Microvirga sp. 17 mud 1-3 |
1/ 1 |
Microvirga thermotolerans |
1/ 1 |
Microvirga terrae |
1/ 1 |
Microvirga lotononidis |
1/ 1 |
Methyloligella |
Methyloligella sp. GL2 |
1/ 1 |
Devosia |
Devosia sp. H5989 |
1/ 1 |
Devosia sp. I507 |
1/ 1 |
Devosia ginsengisoli |
1/ 1 |
Devosia neptuniae |
1/ 1 |
Devosia algicola |
1/ 1 |
Devosia rhodophyticola |
1/ 1 |
Maritalea |
Maritalea myrionectae |
1/ 1 |
Youhaiella |
Youhaiella tibetensis |
1/ 1 |
Mariluticola |
Mariluticola halotolerans |
1/ 1 |
Nordella |
Nordella sp. HKS 07 |
1/ 1 |
Caulobacter |
Caulobacter vibrioides |
2/ 2 |
Caulobacter segnis |
1/ 1 |
Caulobacter mirabilis |
1/ 1 |
Caulobacter sp. FWC26 |
1/ 1 |
Alloyangia |
Alloyangia pacifica |
1/ 1 |
Salipiger |
Salipiger sp. CCB-MM3 |
1/ 1 |
Salipiger abyssi |
1/ 1 |
Paracoccus |
Paracoccus albus |
1/ 1 |
Pseudooceanicola |
Pseudooceanicola spongiae |
1/ 1 |
Gymnodinialimonas |
Gymnodinialimonas ceratoperidinii |
1/ 1 |
Amylibacter |
Amylibacter sp. IMCC11727 |
1/ 1 |
Candidatus Viadribacter |
Candidatus Viadribacter manganicus |
1/ 1 |
Novosphingobium |
Novosphingobium resinovorum |
1/ 1 |
Novosphingobium sp. P6W |
1/ 1 |
Sphingopyxis |
Sphingopyxis alaskensis |
1/ 2 |
Sphingomonas |
Sphingomonas koreensis |
1/ 1 |
Sphingomonas sp. LK11 |
1/ 1 |
Sphingomonas paucimobilis |
1/ 2 |
Sphingomonas lutea |
1/ 1 |
Sphingomonas piscis |
1/ 1 |
Sphingomonas bisphenolicum |
1/ 1 |
Sphingomonas cannabina |
1/ 1 |
Sphingomonas sanguinis |
1/ 1 |
Sphingobium |
Sphingobium sp. YG1 |
1/ 1 |
Sphingobium amiense |
1/ 1 |
Polymorphobacter |
Polymorphobacter sp. PAMC 29334 |
1/ 1 |
Polymorphobacter megasporae |
1/ 1 |
Porphyrobacter |
Porphyrobacter sp. LM 6 |
1/ 1 |
Porphyrobacter sp. YT40 |
1/ 1 |
Porphyrobacter sp. CACIAM 03H1 |
1/ 1 |
Acetobacter |
Acetobacter pomorum |
1/ 1 |
Acetobacter sp. JWB |
1/ 1 |
Azospirillum |
Azospirillum baldaniorum |
1/ 1 |
Azospirillum brasilense |
1/ 3 |
Epsilonproteobacteria |
Campylobacter |
Campylobacter lari |
4/ 7 |
Campylobacter sp. RM16704 |
1/ 1 |
Campylobacter ornithocola |
1/ 1 |
Campylobacter armoricus |
1/ 1 |
Campylobacter novaezeelandiae |
1/ 1 |
Bacilli |
Evansella |
Evansella cellulosilytica |
1/ 1 |
Sutcliffiella |
Sutcliffiella horikoshii |
1/ 1 |
Oceanobacillus |
Oceanobacillus iheyensis |
1/ 1 |
Oceanobacillus zhaokaii |
1/ 1 |
Oceanobacillus sp. 143 |
1/ 1 |
Lysinibacillus |
Lysinibacillus sphaericus |
1/ 2 |
Lysinibacillus fusiformis |
1/ 1 |
Lysinibacillus sp. YS11 |
1/ 1 |
Lysinibacillus agricola |
1/ 1 |
Lysinibacillus capsici |
1/ 1 |
Lysinibacillus irui |
1/ 1 |
Lysinibacillus louembei |
1/ 1 |
Halobacillus |
Halobacillus salinarum |
1/ 1 |
Virgibacillus |
Virgibacillus sp. SK37 |
1/ 1 |
Virgibacillus halodenitrificans |
1/ 1 |
Fictibacillus |
Fictibacillus phosphorivorans |
1/ 1 |
Fictibacillus arsenicus |
1/ 1 |
Psychrobacillus |
Psychrobacillus sp. AK 1817 |
1/ 1 |
Macrococcus |
Macrococcus sp. IME1552 |
1/ 1 |
Macrococcus epidermidis |
1/ 1 |
Macrococcoides |
Macrococcoides caseolyticum |
1/ 1 |
Macrococcoides bohemicum |
1/ 1 |
Salinicoccus |
Salinicoccus halodurans |
1/ 1 |
Exiguobacterium |
Exiguobacterium sp. AT1b |
1/ 1 |
Exiguobacterium alkaliphilum |
1/ 1 |
Exiguobacterium aurantiacum |
1/ 1 |
Exiguobacterium marinum |
1/ 1 |
Exiguobacterium profundum |
1/ 1 |
Paenibacillus |
Paenibacillus sp. FSL R7-0273 |
1/ 1 |
Paenibacillus sp. FSL R7-0331 |
1/ 1 |
Paenibacillus sp. FSL H7-0357 |
1/ 1 |
Paenibacillus riograndensis |
1/ 1 |
Paenibacillus sonchi |
1/ 1 |
Paenibacillus bovis |
1/ 1 |
Paenibacillus donghaensis |
1/ 1 |
Cohnella |
Cohnella candidum |
1/ 1 |
Candidatus Pristimantibacillus |
Candidatus Pristimantibacillus lignocellulolyticus |
1/ 1 |
Solibacillus |
Solibacillus silvestris |
2/ 2 |
Solibacillus sp. R5-41 |
1/ 1 |
Planococcus |
Planococcus maritimus |
1/ 1 |
Planococcus dechangensis |
1/ 1 |
Paenisporosarcina |
Paenisporosarcina antarctica |
1/ 1 |
Streptococcus |
Streptococcus pneumoniae |
7/26 |
Streptococcus sanguinis |
1/ 1 |
Streptococcus suis |
1/19 |
Streptococcus mitis |
1/ 1 |
Streptococcus parasanguinis |
1/ 2 |
Streptococcus intermedius |
1/ 3 |
Streptococcus anginosus |
3/ 3 |
Streptococcus constellatus |
3/ 3 |
Streptococcus cristatus |
1/ 1 |
Streptococcus ilei |
2/ 2 |
Streptococcus sp. VT 162 |
1/ 1 |
Streptococcus sp. A12 |
1/ 1 |
Streptococcus sp. NPS 308 |
1/ 1 |
Streptococcus ruminantium |
1/ 1 |
Streptococcus periodonticum |
1/ 1 |
Streptococcus merionis |
1/ 1 |
Streptococcus parasuis |
1/ 1 |
Streptococcus australis |
1/ 2 |
Streptococcus viridans |
1/ 1 |
Streptococcus milleri |
1/ 1 |
Streptococcus rubneri |
1/ 1 |
Floricoccus |
Floricoccus penangensis |
1/ 1 |
Schleiferilactobacillus |
Schleiferilactobacillus harbinensis |
1/ 1 |
Vagococcus |
Vagococcus coleopterorum |
1/ 1 |
Fundicoccus |
Fundicoccus culcitae |
1/ 1 |
Desemzia |
Desemzia incerta |
1/ 1 |
Clostridia |
Clostridium |
Clostridium cellulovorans |
1/ 1 |
Clostridium argentinense |
1/ 1 |
Clostridium cadaveris |
1/ 1 |
Clostridium manihotivorum |
1/ 1 |
Proteiniclasticum |
Proteiniclasticum sp. QWL-01 |
1/ 1 |
Ruminococcus |
Ruminococcus bovis |
1/ 1 |
Dehalobacter |
Dehalobacter sp. DCA |
1/ 1 |
Dehalobacter sp. CF |
1/ 1 |
Alkalicella |
Alkalicella caledoniensis |
1/ 1 |
|
Clostridiales bacterium FE2010 |
1/ 1 |
Lachnoclostridium |
Lachnoclostridium phytofermentans |
1/ 1 |
Sellimonas |
Sellimonas intestinalis |
1/ 1 |
Agathobacter |
Agathobacter rectalis |
1/ 3 |
Vallitalea |
Vallitalea guaymasensis |
1/ 1 |
Alkaliphilus |
Alkaliphilus metalliredigens |
1/ 1 |
Other Bacillota |
Tissierella |
Tissierella sp. MB52-C2 |
1/ 1 |
Turicibacter |
Turicibacter sp. H121 |
1/ 1 |
Turicibacter sanguinis |
1/ 1 |
Turicibacter bilis |
1/ 1 |
Actinomycetota |
Eggerthella |
Eggerthella guodeyinii |
1/ 1 |
Nocardia |
Nocardia seriolae |
1/ 1 |
Nocardia sp. CS682 |
1/ 1 |
Luteimicrobium |
Luteimicrobium xylanilyticum |
1/ 1 |
Microbacterium |
Microbacterium paludicola |
1/ 1 |
Arthrobacter |
Arthrobacter alpinus |
1/ 2 |
Arthrobacter sp. Hiyo8 |
1/ 1 |
Arthrobacter sp. YN |
1/ 1 |
Arthrobacter agilis |
1/ 1 |
Cellulomonas |
Cellulomonas flavigena |
1/ 1 |
Oerskovia |
Oerskovia sp. KBS0722 |
1/ 1 |
Tessaracoccus |
Tessaracoccus flavescens |
1/ 1 |
Amycolatopsis |
Amycolatopsis mediterranei |
2/ 4 |
Cyanobacteriota |
Chamaesiphon |
Chamaesiphon minutus |
1/ 1 |
Crinalium |
Crinalium epipsammum |
1/ 1 |
Leptolyngbya |
Leptolyngbya boryana |
1/ 2 |
Leptolyngbya sp. 7M |
1/ 1 |
Leptolyngbya sp. 15MV |
1/ 1 |
Gloeothece |
Gloeothece citriformis |
1/ 1 |
Gloeothece verrucosa |
1/ 1 |
Gloeobacter |
Gloeobacter kilaueensis |
1/ 1 |
Calothrix |
Calothrix sp. NIES-2098 |
1/ 1 |
Calothrix sp. NIES-3974 |
1/ 1 |
Rivularia |
Rivularia sp. PCC 7116 |
1/ 1 |
Fischerella |
Fischerella sp. NIES-3754 |
1/ 1 |
Chroococcidiopsis |
Chroococcidiopsis thermalis |
1/ 1 |
Chloroflexota |
Candidatus Promineifilum |
Candidatus Promineifilum breve |
1/ 1 |
Deinococcota |
Thermus |
Thermus aquaticus |
1/ 2 |
Thermus parvatiensis |
1/ 1 |
Thermus brockianus |
1/ 1 |
Thermus antranikianii |
1/ 1 |
Meiothermus |
Meiothermus ruber |
2/ 2 |
Meiothermus taiwanensis |
1/ 1 |
Allomeiothermus |
Allomeiothermus silvanus |
1/ 1 |
Verrucomicrobiota |
Opitutus |
Opitutus terrae |
1/ 1 |
Synoicihabitans |
Synoicihabitans lomoniglobus |
1/ 1 |
Actomonas |
Actomonas aquatica |
1/ 1 |
Roseimicrobium |
Roseimicrobium sp. ORNL1 |
1/ 1 |
Luteolibacter |
Luteolibacter luteus |
1/ 1 |
Planctomycetota |
Stratiformator |
Stratiformator vulcanicus |
1/ 1 |
Calycomorphotria |
Calycomorphotria hydatis |
1/ 1 |
Gemmata |
Gemmata sp. SH-PL17 |
1/ 1 |
Gemmata massiliana |
1/ 1 |
Singulisphaera |
Singulisphaera acidiphila |
1/ 1 |
|
Planctomycetes bacterium Pla133 |
1/ 1 |
Spirochaetota |
Treponema |
Treponema putidum |
1/ 1 |
Acidobacteriota |
Alloacidobacterium |
Alloacidobacterium dinghuense |
1/ 1 |
Bacteroidota |
Flavihumibacter |
Flavihumibacter rivuli |
1/ 1 |
Algoriphagus |
Algoriphagus sp. NBT04N3 |
1/ 1 |
Spirosoma |
Spirosoma linguale |
1/ 1 |
Spirosoma pollinicola |
1/ 1 |
Spirosoma sp. KCTC 42546 |
1/ 1 |
Spirosoma oryzicola |
1/ 1 |
Rhodocytophaga |
Rhodocytophaga rosea |
1/ 1 |
Runella |
Runella slithyformis |
1/ 1 |
Runella rosea |
1/ 1 |
Runella sp. SP2 |
1/ 1 |
Fibrella |
Fibrella aestuarina |
1/ 1 |
Fibrella sp. ES10-3-2-2 |
1/ 1 |
Adhaeribacter |
Adhaeribacter radiodurans |
1/ 1 |
Adhaeribacter swui |
1/ 1 |
Chryseolinea |
Chryseolinea soli |
1/ 1 |
Fulvivirga |
Fulvivirga ulvae |
1/ 1 |
Myroides |
Myroides odoratimimus |
1/ 1 |
Elizabethkingia |
Elizabethkingia anophelis |
1/ 3 |