Peromyscus maniculatus

Peromyscus maniculatus

Scientific Name	Peromyscus maniculatus [TAX:10042]
Lineage	cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus

Known viruses (6)

Scientific Name	Colorado tick fever virus [TAX:46839]
Lineage	Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Spinareoviridae; Coltivirus; Colorado tick fever coltivirus
RefSeq	NC_004180 Colorado tick fever virus segment 9, complete sequence.
DISEASE	H02165 Colorado tick fever
Evidence	UniProt
Evidence	Literature
Reference	PMID: 6259958
Authors	Bowen GS, Shriner RB, Pokorny KS, Kirk LJ, McLean RG
Title	Experimental Colorado tick fever virus infection in Colorado mammals.
Journal	Am J Trop Med Hyg. 1981 Jan;30(1):224-9.
DBLINKS	KEGG BRITE: NC_004180 KEGG GENOME: T40063 ViralZone: family, genus

Scientific Name	Hepacivirus peromysci [TAX:3052235]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Hepacivirus
GenBank	KC815310 Hepacivirus peromysci isolate RHV-339, complete genome.
Evidence	GenBank
DBLINKS	ICTV: 202203129 ViralZone: family, genus

Scientific Name	Modoc virus [TAX:64300]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus; Orthoflavivirus modocense
RefSeq	NC_003635 Modoc virus, complete genome.
Evidence	Literature
Reference	PMID: 11853406
Authors	Leyssen P, Charlier N, Lemey P, Billoir F, Vandamme AM, De Clercq E, de Lamballerie X, Neyts J
Title	Complete genome sequence, taxonomic assignment, and comparative analysis of the untranslated regions of the Modoc virus, a flavivirus with no known vector.
Journal	Virology. 2002 Feb 1;293(1):125-40.
DBLINKS	KEGG BRITE: NC_003635 ViralZone: family, genus

Scientific Name	Orthohantavirus sinnombreense [TAX:3052499]
Lineage	Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; Ellioviricetes; Bunyavirales; Hantaviridae; Mammantavirinae; Orthohantavirus
RefSeq	NC_005215 Sin Nombre virus segment M, complete genome. NC_005216 Sin Nombre virus segment S, complete sequence. NC_005217 Sin Nombre virus map viral genome L segment. NC_077669 Sin Nombre virus (NM R11) RNA S segment encoding nucleocapsid protein (N protein), complete cds. NC_077670 Sin Nombre virus (NM R11) RNA M segment encoding surface glycoproteins (G1 and G2 proteins), complete cds. NC_077671 Sin Nombre virus (NM R11) RNA L segment encoding RNA polymerase (L protein), complete cds.
DISEASE	H00390 Hantavirus pulmonary syndrome
Evidence	RefSeq
Evidence	UniProt
Evidence	Literature
Reference	PMID: 32091360
Authors	Danforth ME, Messenger S, Buttke D, Weinburke M, Carroll G, Hacker G, Niemela M, Andrews ES, Jackson BT, Kramer V, Novak M
Title	Long-Term Rodent Surveillance after Outbreak of Hantavirus Infection, Yosemite National Park, California, USA, 2012.
Journal	Emerg Infect Dis. 2020 Mar;26(3):560-567.
Evidence	Literature
Reference	PMID: 8178455
Authors	Spiropoulou CF, Morzunov S, Feldmann H, Sanchez A, Peters CJ, Nichol ST
Title	Genome structure and variability of a virus causing hantavirus pulmonary syndrome.
Journal	Virology. 1994 May 1;200(2):715-23.
DBLINKS	KEGG BRITE: NC_005215 NC_005216 NC_005217 NC_077669 NC_077670 NC_077671 KEGG GENOME: T40020 ICTV: 202200057 ViralZone: genus, family

Scientific Name	Peromyscus papillomavirus 1 [TAX:1074206]
Lineage	Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Iotapapillomavirus; Iotapapillomavirus 2
RefSeq	NC_039039 Peromyscus papillomavirus type 1 strain M-14 PmPV1, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_039039 ViralZone: family, genus

Scientific Name	Rodent hepacivirus [TAX:1281454]
Lineage	Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Flasuviricetes; Amarillovirales; Flaviviridae; Hepacivirus; unclassified Hepacivirus
RefSeq	NC_021153 Rodent hepacivirus, complete genome.
Evidence	RefSeq
DBLINKS	KEGG BRITE: NC_021153 ViralZone: family, genus