KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ala00010 ala01200 ala01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ala00010 ala01200 ala01230 ala01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ala00010 ala00020 ala01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ala00010 ala00020 ala00620 ala00785 ala01200 ala01210 ala01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ala00020 ala01200 ala01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ala00020 ala01200 ala01210 ala01230 ala01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ala00020 ala01200 ala01210 ala01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ala00030 ala01200 ala01100 ala01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ala00030 ala01200 ala01100 ala01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ala00030 ala01200 ala01230 ala01100 ala01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ala00030 ala00230 ala01200 ala01230 ala01100]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: ala00040 ala01100]
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH: ala00040 ala00030 ala01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: ala00040 ala00030 ala01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: ala00052 ala01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: ala00500 ala01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: ala00500 ala01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH: ala00500 ala01100 ala01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: ala00520 ala01250 ala01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: ala00520 ala00052 ala01250 ala01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: ala00520 ala01250 ala01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: ala00520 ala01250 ala01100]
M00012 Glyoxylate cycle [PATH: ala00630 ala01200 ala01100 ala01110]
M00013 Malonate semialdehyde pathway, propanoyl-CoA => acetyl-CoA [PATH: ala00410 ala00640 ala01200 ala01100]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: ala00280 ala00630 ala00640 ala01200 ala01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: ala00562 ala01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: ala00562 ala01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: ala00562 ala01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00101 Cholesterol biosynthesis, FPP => cholesterol [PATH: ala01100]
M00103 Cholecalciferol biosynthesis [PATH: ala01100]
M00107 Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH: ala01100]
M00109 C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH: ala01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH: ala01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH: ala01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: ala00400 ala01230 ala01100 ala01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: ala00400 ala01230 ala01100 ala01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: ala00400 ala01230 ala01100 ala01110]
M00040 Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH: ala00400 ala01230 ala01100 ala01110]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: ala00350 ala01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: ala00350 ala01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: ala00350 ala01100]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: ala00380 ala01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: ala00380 ala01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00055 N-glycan precursor biosynthesis [PATH: ala01100]
M00073 N-glycan precursor trimming [PATH: ala01100]
M00075 N-glycan biosynthesis, complex type [PATH: ala01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH: ala01100]
M00065 GPI-anchor biosynthesis, core oligosaccharide [PATH: ala01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH: ala01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH: ala01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH: ala01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:ala00730 ala01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ala00740 ala01240 ala01100 ala01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:ala00750 ala01240 ala01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ala00760 ala01240 ala01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:ala00380 ala00760 ala01240 ala01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ala00770 ala01240 ala01100 ala01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:ala00770 ala01240 ala01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:ala00780 ala01240 ala01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ala00780 ala01240 ala01100]
M00950 Biotin biosynthesis, BioU pathway, pimeloyl-ACP/CoA => biotin [PATH:ala00780 ala01240 ala01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ala00785 ala01240 ala01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:ala00785 ala01240 ala01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:ala00785 ala01240 ala01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:ala00790 ala00670 ala01240 ala01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:ala00790 ala01240 ala01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ala00790 ala01240 ala01100]
M00140 C1-unit interconversion, prokaryotes [PATH:ala00670 ala01240 ala01100]
M00141 C1-unit interconversion, eukaryotes [PATH:ala00670 ala01240 ala01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ala00860 ala01240 ala01100 ala01110]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:ala00860 ala01240 ala01100 ala01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ala00860 ala01240 ala01100 ala01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:ala00130 ala01240 ala01100]
M00931 Menaquinone biosynthesis, modified futalosine pathway [PATH:ala00130 ala01240 ala01100]
M00932 Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:ala00130 ala01240 ala01100 ala01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00705 Multidrug resistance, efflux pump MepA
Plant pathogenicity
Symbiosis
Module set
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