KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: bag00010 bag01200 bag01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: bag00010 bag01200 bag01230 bag01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: bag00010 bag00020 bag01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: bag00010 bag00020 bag00620 bag00785 bag01200 bag01210 bag01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: bag00020 bag01200 bag01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: bag00020 bag01200 bag01210 bag01230 bag01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: bag00020 bag01200 bag01210 bag01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: bag00030 bag01200 bag01100 bag01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: bag00030 bag01200 bag01100 bag01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: bag00030 bag01200 bag01230 bag01100 bag01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: bag00030 bag01200 bag01230 bag01100 bag01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: bag00030 bag00230 bag01200 bag01230 bag01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: bag00030 bag01200 bag01100 bag01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:bag00040 bag00030 bag01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:bag00040 bag00030 bag01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:bag00052 bag01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:bag00052 bag01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bag00500 bag01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:bag00500 bag01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bag00520 bag01250 bag01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:bag00520 bag00052 bag01250 bag01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bag00520 bag01250 bag01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:bag00520 bag01100]
M00012 Glyoxylate cycle [PATH:bag00630 bag01200 bag01100 bag01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: bag00730 bag01240 bag01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: bag00730 bag01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: bag00740 bag01240 bag01100 bag01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: bag00750 bag01240 bag01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: bag00750 bag01240 bag01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: bag00760 bag01240 bag01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: bag00770 bag01240 bag01100 bag01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: bag00770 bag01240 bag01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: bag00780 bag01240 bag01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: bag00780 bag01240 bag01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: bag00785 bag01240 bag01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH: bag00785 bag01240 bag01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: bag00790 bag00670 bag01240 bag01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: bag00790 bag01240 bag01100]
M00140 C1-unit interconversion, prokaryotes [PATH: bag00670 bag01240 bag01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: bag00860 bag01240 bag01100 bag01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: bag00860 bag01240 bag01100 bag01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: bag00860 bag01240 bag01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: bag00860 bag01240 bag01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: bag00860 bag01240 bag01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: bag00130 bag01240 bag01100 bag01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: bag00130 bag01240 bag01100 bag01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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