KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:bbh00010 bbh01200 bbh01230 bbh01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:bbh00010 bbh00020 bbh01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:bbh00010 bbh00020 bbh00620 bbh00785 bbh01200 bbh01210 bbh01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:bbh00020 bbh01200 bbh01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:bbh00020 bbh01200 bbh01210 bbh01230 bbh01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:bbh00020 bbh01200 bbh01210 bbh01100]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:bbh00030 bbh01200 bbh01230 bbh01100 bbh01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:bbh00030 bbh00230 bbh01200 bbh01230 bbh01100]

Other carbohydrate metabolism
M00012 Glyoxylate cycle [PATH:bbh00630 bbh01200 bbh01100 bbh01110]

Energy metabolism
Carbon fixation
M00168 CAM (Crassulacean acid metabolism), dark [PATH:bbh00620 bbh01200 bbh01100 bbh01120]
M00579 Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:bbh00430 bbh00620 bbh01200 bbh01100 bbh01120]

Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
M00144 NADH:quinone oxidoreductase, prokaryotes [PATH:bbh00190 bbh01100]
M00149 Succinate dehydrogenase, prokaryotes [PATH:bbh00190 bbh01100]
M00151 Cytochrome bc1 complex respiratory unit [PATH:bbh00190 bbh01100]
M00155 Cytochrome c oxidase, prokaryotes [PATH:bbh00190 bbh01100]
M00153 Cytochrome bd ubiquinol oxidase [PATH:bbh00190]
M00417 Cytochrome o ubiquinol oxidase [PATH:bbh00190 bbh01100]
M00156 Cytochrome c oxidase, cbb3-type [PATH:bbh00190 bbh01100]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH:bbh00190 bbh01100]

Lipid metabolism
Fatty acid metabolism
M00082 Fatty acid biosynthesis, initiation [PATH:bbh00061 bbh01212 bbh01100]
M00083 Fatty acid biosynthesis, elongation [PATH:bbh00061 bbh01212 bbh01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:bbh00061 bbh00071 bbh01212 bbh01100]
M00087 beta-Oxidation [PATH:bbh00071 bbh01212 bbh01100]

Sterol biosynthesis
Lipid metabolism
M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:bbh00564 bbh01100]

Nucleotide metabolism
Purine metabolism
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:bbh00230 bbh01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:bbh00230 bbh01232 bbh01240 bbh01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:bbh00230 bbh01232 bbh01100]
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:bbh00230 bbh00240 bbh01232 bbh01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:bbh00240 bbh01232 bbh01240 bbh01100]
M00938 Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:bbh00240 bbh01232 bbh01100]

Amino acid metabolism
Serine and threonine metabolism
M00020 Serine biosynthesis, glycerate-3P => serine [PATH:bbh00260 bbh00680 bbh01200 bbh01230 bbh01100]
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:bbh00260 bbh01230 bbh01100 bbh01110]
M00621 Glycine cleavage system [PATH:bbh00260 bbh00630 bbh00785 bbh01200 bbh01100]
M00033 Ectoine biosynthesis, aspartate => ectoine [PATH:bbh00260 bbh01210 bbh01230 bbh01100 bbh01120]

Cysteine and methionine metabolism
Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:bbh00290 bbh00770 bbh01210 bbh01230 bbh01100 bbh01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:bbh00290 bbh01230 bbh01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:bbh00290 bbh01210 bbh01230 bbh01100 bbh01110]

Lysine metabolism
M00016 Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:bbh00300 bbh01230 bbh01100]

Arginine and proline metabolism
M00028 Ornithine biosynthesis, glutamate => ornithine [PATH:bbh00220 bbh01210 bbh01230 bbh01100]
M00844 Arginine biosynthesis, ornithine => arginine [PATH:bbh00220 bbh01230 bbh01100]
M00015 Proline biosynthesis, glutamate => proline [PATH:bbh00330 bbh01230 bbh01100]
M00970 Proline degradation, proline => glutamate [PATH:bbh00330 bbh01100]

Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:bbh00400 bbh01230 bbh01100 bbh01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:bbh00400 bbh01230 bbh01100 bbh01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:bbh00400 bbh01230 bbh01100 bbh01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:bbh00400 bbh01230 bbh01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH:bbh00350 bbh01100]
M00533 Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:bbh00350 bbh01220 bbh01100 bbh01120]

Other amino acid metabolism
M00027 GABA (gamma-Aminobutyrate) shunt [PATH:bbh00250 bbh00650 bbh01100]
M00118 Glutathione biosynthesis, glutamate => glutathione [PATH:bbh00480 bbh01240 bbh01100]

Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
M00063 CMP-KDO biosynthesis [PATH:bbh00540 bbh01250 bbh01100]
M00064 ADP-L-glycero-D-manno-heptose biosynthesis [PATH:bbh00540 bbh01250 bbh01100]

Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00622 Nicotinate degradation, nicotinate => fumarate [PATH:bbh00760 bbh01100 bbh01120]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bbh00770 bbh01240 bbh01100 bbh01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:bbh00770 bbh01240 bbh01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:bbh00780 bbh01240 bbh01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bbh00780 bbh01240 bbh01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:bbh00785 bbh01240 bbh01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bbh00790 bbh01240 bbh01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bbh00860 bbh01240 bbh01100 bbh01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:bbh00860 bbh01240 bbh01100 bbh01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:bbh00130 bbh01240 bbh01100 bbh01110]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
M00574 Pertussis pathogenicity signature, pertussis toxin [PATH:bbh05133]

Drug resistance
M00698 Multidrug resistance, efflux pump BpeEF-OprC

Plant pathogenicity
Symbiosis
Module set
Metabolic capacity