KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: bcir00010 bcir01200 bcir01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: bcir00010 bcir01200 bcir01230 bcir01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: bcir00010 bcir00020 bcir00620 bcir00785 bcir01200 bcir01210 bcir01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: bcir00020 bcir01200 bcir01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: bcir00020 bcir01200 bcir01210 bcir01230 bcir01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: bcir00020 bcir01200 bcir01210 bcir01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: bcir00030 bcir01200 bcir01100 bcir01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: bcir00030 bcir01200 bcir01100 bcir01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: bcir00030 bcir01200 bcir01230 bcir01100 bcir01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: bcir00030 bcir01200 bcir01230 bcir01100 bcir01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: bcir00030 bcir00230 bcir01200 bcir01230 bcir01100]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:bcir00730 bcir01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bcir00740 bcir01240 bcir01100 bcir01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bcir00750 bcir01240 bcir01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bcir00760 bcir01240 bcir01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:bcir00770 bcir01240 bcir01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bcir00785 bcir01240 bcir01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:bcir00790 bcir00670 bcir01240 bcir01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bcir00790 bcir01240 bcir01100]
M00140 C1-unit interconversion, prokaryotes [PATH:bcir00670 bcir01240 bcir01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bcir00860 bcir01240 bcir01100 bcir01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bcir00860 bcir01240 bcir01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:bcir01501]
M00700 Multidrug resistance, efflux pump AbcA
M00705 Multidrug resistance, efflux pump MepA
Plant pathogenicity
Symbiosis
Module set
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