KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: bma00010 bma01200 bma01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: bma00010 bma01200 bma01230 bma01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: bma00010 bma00020 bma01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: bma00010 bma00020 bma00620 bma00785 bma01200 bma01210 bma01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: bma00020 bma01200 bma01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: bma00020 bma01200 bma01210 bma01230 bma01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: bma00020 bma01200 bma01210 bma01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: bma00030 bma01200 bma01100 bma01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: bma00030 bma01200 bma01100 bma01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: bma00030 bma01200 bma01230 bma01100 bma01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: bma00030 bma00230 bma01200 bma01230 bma01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: bma00030 bma01200 bma01100 bma01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: bma00040 bma01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: bma00052 bma01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH: bma00052 bma01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: bma00500 bma01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: bma00500 bma01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: bma00520 bma01250 bma01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: bma00520 bma00052 bma01250 bma01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: bma00520 bma01250 bma01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: bma00520 bma01250 bma01100]
M00012 Glyoxylate cycle [PATH: bma00630 bma01200 bma01100 bma01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: bma00280 bma00630 bma00640 bma01200 bma01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: bma00562 bma01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
M00057 Glycosaminoglycan biosynthesis, linkage tetrasaccharide [PATH: bma01100]
M00059 Glycosaminoglycan biosynthesis, heparan sulfate backbone [PATH: bma01100]
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:bma00730 bma01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bma00740 bma01240 bma01100 bma01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:bma00750 bma01240 bma01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bma00750 bma01240 bma01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bma00760 bma01240 bma01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bma00770 bma01240 bma01100 bma01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:bma00770 bma01240 bma01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:bma00780 bma01240 bma01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bma00780 bma01240 bma01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:bma00785 bma01240 bma01100]
M00882 Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:bma00785 bma01240 bma01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bma00785 bma01240 bma01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:bma00790 bma00670 bma01240 bma01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:bma00790 bma01240 bma01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bma00790 bma01240 bma01100]
M00140 C1-unit interconversion, prokaryotes [PATH:bma00670 bma01240 bma01100]
M00141 C1-unit interconversion, eukaryotes [PATH:bma00670 bma01240 bma01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bma00860 bma01240 bma01100 bma01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:bma00860 bma01240 bma01100 bma01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:bma00860 bma01240 bma01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:bma00130 bma01240 bma01100 bma01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:bma00130 bma01240 bma01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00643 Multidrug resistance, efflux pump MexXY-OprM
M00698 Multidrug resistance, efflux pump BpeEF-OprC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
|
|