KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: bsy00010 bsy01200 bsy01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: bsy00010 bsy01200 bsy01230 bsy01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: bsy00010 bsy00020 bsy01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: bsy00010 bsy00020 bsy00620 bsy00785 bsy01200 bsy01210 bsy01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: bsy00020 bsy01200 bsy01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: bsy00020 bsy01200 bsy01210 bsy01230 bsy01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: bsy00020 bsy01200 bsy01210 bsy01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: bsy00030 bsy01200 bsy01100 bsy01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: bsy00030 bsy01200 bsy01100 bsy01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: bsy00030 bsy01200 bsy01230 bsy01100 bsy01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: bsy00030 bsy00230 bsy01200 bsy01230 bsy01100]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:bsy00040 bsy00030 bsy01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:bsy00052 bsy01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:bsy00500 bsy01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:bsy00500 bsy01100 bsy01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:bsy00520 bsy01250 bsy01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:bsy00520 bsy00052 bsy01250 bsy01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:bsy00520 bsy01250 bsy01100]
M00012 Glyoxylate cycle [PATH:bsy00630 bsy01200 bsy01100 bsy01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:bsy00280 bsy00630 bsy00640 bsy01200 bsy01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00895 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/glycine) => TMP/TPP [PATH:bsy00730 bsy01240 bsy01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:bsy00730 bsy01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:bsy00740 bsy01240 bsy01100 bsy01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:bsy00750 bsy01240 bsy01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:bsy00760 bsy01240 bsy01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:bsy00770 bsy01240 bsy01100 bsy01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:bsy00770 bsy01240 bsy01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:bsy00780 bsy01240 bsy01100]
M00573 Biotin biosynthesis, BioI pathway, long-chain-acyl-ACP => pimeloyl-ACP => biotin [PATH:bsy00780 bsy01240 bsy01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:bsy00780 bsy01240 bsy01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:bsy00785 bsy01240 bsy01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:bsy00785 bsy01240 bsy01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:bsy00790 bsy00670 bsy01240 bsy01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:bsy00790 bsy01240 bsy01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:bsy00860 bsy01240 bsy01100 bsy01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:bsy00860 bsy01240 bsy01100]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:bsy00860 bsy01240 bsy01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:bsy00860 bsy01240 bsy01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:bsy00130 bsy01240 bsy01100 bsy01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00700 Multidrug resistance, efflux pump AbcA
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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