KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: cab00010 cab01200 cab01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: cab00010 cab01200 cab01230 cab01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: cab00010 cab00020 cab01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: cab00010 cab00020 cab00620 cab00785 cab01200 cab01210 cab01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: cab00020 cab01200 cab01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: cab00020 cab01200 cab01210 cab01230 cab01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: cab00020 cab01200 cab01210 cab01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: cab00030 cab01200 cab01100 cab01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: cab00030 cab01200 cab01100 cab01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: cab00030 cab01200 cab01230 cab01100 cab01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: cab00030 cab00230 cab01200 cab01230 cab01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: cab00030 cab01200 cab01100 cab01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: cab01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: cab01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH: cab01100]
M00129 Ascorbate biosynthesis, animals, glucose-1P => ascorbate [PATH: cab01240 cab01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: cab00500 cab01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: cab00500 cab01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH: cab00500 cab01100 cab01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: cab00520 cab01250 cab01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: cab00520 cab01250 cab01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: cab00520 cab01250 cab01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: cab00520 cab01250 cab01100]
M00012 Glyoxylate cycle [PATH: cab00630 cab01200 cab01100 cab01110]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: cab00280 cab00630 cab00640 cab01200 cab01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: cab01100]
M00131 Inositol phosphate metabolism, Ins(1,3,4,5)P4 => Ins(1,3,4)P3 => myo-inositol [PATH: cab01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: cab01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00101 Cholesterol biosynthesis, FPP => cholesterol [PATH: cab01100]
M00103 Cholecalciferol biosynthesis [PATH: cab01100]
M00862 beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA [PATH: cab01100]
M00107 Steroid hormone biosynthesis, cholesterol => pregnenolone => progesterone [PATH: cab01100]
M00109 C21-Steroid hormone biosynthesis, progesterone => cortisol/cortisone [PATH: cab01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH: cab01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH: cab01100]
M00977 C19-Steroid hormone biosynthesis (androgen backdoor pathway), pregnenolone => androsterone => dihydrotestosterone [PATH: cab01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH: cab00400 cab01230 cab01100 cab01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH: cab00400 cab01230 cab01100 cab01110]
M00024 Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH: cab00400 cab01230 cab01100 cab01110]
M00025 Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH: cab00400 cab01230 cab01100]
M00042 Catecholamine biosynthesis, tyrosine => dopamine => noradrenaline => adrenaline [PATH: cab01100]
M00043 Thyroid hormone biosynthesis, tyrosine => triiodothyronine/thyroxine [PATH: cab01100]
M00044 Tyrosine degradation, tyrosine => homogentisate [PATH: cab01100]
M00037 Melatonin biosynthesis, animals, tryptophan => serotonin => melatonin [PATH: cab01100]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH: cab01100]
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00055 N-glycan precursor biosynthesis [PATH: cab01100]
M00073 N-glycan precursor trimming [PATH: cab01100]
M00075 N-glycan biosynthesis, complex type [PATH: cab01100]
M00872 O-glycan biosynthesis, mannose type (core M3) [PATH: cab01100]
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH: cab01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH: cab01100]
M00068 Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer [PATH: cab01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH: cab01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:cab00730 cab01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:cab01240 cab01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cab00760 cab01240 cab01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:cab00760 cab01240 cab01100]
M00622 Nicotinate degradation, nicotinate => fumarate [PATH:cab00760 cab01100 cab01120]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cab00770 cab01240 cab01100 cab01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:cab00770 cab01240 cab01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cab00780 cab01240 cab01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cab00785 cab01240 cab01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:cab00790 cab00670 cab01240 cab01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:cab00790 cab01240 cab01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cab00790 cab01240 cab01100]
M00141 C1-unit interconversion, eukaryotes [PATH:cab00670 cab01240 cab01100]
M00868 Heme biosynthesis, animals and fungi, glycine => heme [PATH:cab00860 cab01240 cab01100 cab01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cab00860 cab01240 cab01100 cab01110]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:cab00860 cab01240 cab01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:cab00860 cab01240 cab01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cab00130 cab01240 cab01100 cab01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:cab00130 cab01240 cab01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00642 Multidrug resistance, efflux pump MexJK-OprM
M00649 Multidrug resistance, efflux pump AdeABC [PATH:cab01501]
M00698 Multidrug resistance, efflux pump BpeEF-OprC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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