KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: car00010 car01200 car01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: car00010 car01200 car01230 car01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: car00010 car00020 car01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: car00010 car00020 car00620 car00785 car01200 car01210 car01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: car00020 car01200 car01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: car00020 car01200 car01210 car01230 car01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: car00020 car01200 car01210 car01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: car00030 car01200 car01100 car01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: car00030 car01200 car01100 car01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: car00030 car01200 car01230 car01100 car01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH: car00030 car01200 car01230 car01100 car01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: car00030 car00230 car01200 car01230 car01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: car00030 car01200 car01100 car01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:car00040 car00030 car01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:car00040 car00030 car01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:car00052 car01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:car00052 car01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:car01100 car01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:car00500 car01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:car00500 car01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:car00500 car01100 car01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:car00520 car01250 car01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:car00520 car00052 car01250 car01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:car00520 car01250 car01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:car00520 car01100]
M00012 Glyoxylate cycle [PATH:car00630 car01200 car01100 car01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: car00730 car01240 car01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: car00730 car01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: car00740 car01240 car01100 car01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: car00750 car01240 car01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: car00750 car01240 car01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: car00760 car01240 car01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: car00770 car01240 car01100 car01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: car00770 car01240 car01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: car00780 car01240 car01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: car00780 car01240 car01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: car00785 car01240 car01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: car00790 car00670 car01240 car01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: car00790 car01240 car01100]
M00140 C1-unit interconversion, prokaryotes [PATH: car00670 car01240 car01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: car00860 car01240 car01100 car01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: car00860 car01240 car01100 car01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: car00860 car01240 car01100]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: car00860 car01240 car01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: car00860 car01240 car01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: car00130 car01240 car01100 car01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: car00130 car01240 car01100 car01110]
M00931 Menaquinone biosynthesis, modified futalosine pathway [PATH: car00130 car01240 car01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00851 Carbapenem resistance [PATH: car01501]
M00627 beta-Lactam resistance, Bla system [PATH: car01501]
M00696 Multidrug resistance, efflux pump AcrEF-TolC
M00697 Multidrug resistance, efflux pump MdtEF-TolC
M00698 Multidrug resistance, efflux pump BpeEF-OprC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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