KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: cco00010 cco01200 cco01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: cco00010 cco01200 cco01230 cco01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: cco00010 cco00020 cco01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: cco00010 cco00020 cco00620 cco01200 cco01210 cco01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: cco00020 cco01200 cco01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: cco00020 cco01200 cco01210 cco01230 cco01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: cco00020 cco01200 cco01210 cco01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: cco00030 cco01200 cco01100 cco01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: cco00030 cco01200 cco01100 cco01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: cco00030 cco01200 cco01230 cco01100 cco01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: cco00030 cco00230 cco01200 cco01230 cco01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: cco00030 cco01200 cco01100 cco01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cco00040 cco00030 cco01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cco00040 cco00030 cco01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cco00052 cco01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:cco00052 cco01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cco00500 cco01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:cco00500 cco01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:cco00500 cco01100 cco01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cco00520 cco01250 cco01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cco00520 cco00052 cco01250 cco01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cco00520 cco01250 cco01100]
M00012 Glyoxylate cycle [PATH:cco00630 cco01200 cco01100 cco01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: cco00730 cco01240 cco01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: cco00730 cco01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: cco00740 cco01240 cco01100 cco01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: cco00750 cco01240 cco01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: cco00750 cco01240 cco01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: cco00760 cco01240 cco01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: cco00770 cco01240 cco01100 cco01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: cco00770 cco01240 cco01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: cco00780 cco01240 cco01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: cco00780 cco01240 cco01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: cco01240 cco01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: cco00790 cco00670 cco01240 cco01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: cco00790 cco01240 cco01100]
M00140 C1-unit interconversion, prokaryotes [PATH: cco00670 cco01240 cco01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: cco00860 cco01240 cco01100 cco01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: cco00860 cco01240 cco01100 cco01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH: cco00860 cco01240 cco01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: cco00860 cco01240 cco01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: cco00130 cco01240 cco01100 cco01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: cco00130 cco01240 cco01100 cco01110]
M00930 Menaquinone biosynthesis, futalosine pathway [PATH: cco00130 cco01240 cco01100]
M00931 Menaquinone biosynthesis, modified futalosine pathway [PATH: cco00130 cco01240 cco01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00627 beta-Lactam resistance, Bla system [PATH:cco01501]
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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