KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: cfd00010 cfd01200 cfd01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: cfd00010 cfd01200 cfd01230 cfd01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: cfd00010 cfd00020 cfd01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: cfd00010 cfd00020 cfd00620 cfd00785 cfd01200 cfd01210 cfd01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: cfd00020 cfd01200 cfd01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: cfd00020 cfd01200 cfd01210 cfd01230 cfd01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: cfd00020 cfd01200 cfd01210 cfd01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: cfd00030 cfd01200 cfd01100 cfd01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: cfd00030 cfd01200 cfd01100 cfd01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: cfd00030 cfd01200 cfd01230 cfd01100 cfd01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: cfd00030 cfd00230 cfd01200 cfd01230 cfd01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: cfd00030 cfd01200 cfd01100 cfd01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cfd00040 cfd00030 cfd01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cfd00040 cfd00030 cfd01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cfd00052 cfd01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:cfd00053 cfd01100 cfd01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cfd00500 cfd01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:cfd00500 cfd01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cfd00520 cfd01250 cfd01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cfd00520 cfd00052 cfd01250 cfd01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cfd00520 cfd01250 cfd01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:cfd00520 cfd01100]
M00012 Glyoxylate cycle [PATH:cfd00630 cfd01200 cfd01100 cfd01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: cfd00730 cfd01240 cfd01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: cfd00730 cfd01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: cfd00740 cfd01240 cfd01100 cfd01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: cfd00750 cfd01240 cfd01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: cfd00760 cfd01240 cfd01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: cfd00770 cfd01240 cfd01100 cfd01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: cfd00770 cfd01240 cfd01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: cfd00780 cfd01240 cfd01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: cfd00780 cfd01240 cfd01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: cfd00785 cfd01240 cfd01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: cfd00790 cfd00670 cfd01240 cfd01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: cfd00790 cfd01240 cfd01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: cfd00860 cfd01240 cfd01100 cfd01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: cfd00860 cfd01240 cfd01100 cfd01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: cfd00860 cfd01240 cfd01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: cfd00860 cfd01240 cfd01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: cfd00130 cfd01240 cfd01100 cfd01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: cfd00130 cfd01240 cfd01100 cfd01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00851 Carbapenem resistance [PATH: cfd01501]
M00696 Multidrug resistance, efflux pump AcrEF-TolC
M00697 Multidrug resistance, efflux pump MdtEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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