KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:chlo00010 chlo01200 chlo01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH:chlo00010 chlo01200 chlo01230 chlo01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:chlo00010 chlo00020 chlo01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:chlo00010 chlo00020 chlo00620 chlo00785 chlo01200 chlo01210 chlo01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:chlo00020 chlo01200 chlo01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:chlo00020 chlo01200 chlo01210 chlo01230 chlo01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:chlo00020 chlo01200 chlo01210 chlo01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:chlo00030 chlo01200 chlo01100 chlo01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:chlo00030 chlo01200 chlo01100 chlo01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:chlo00030 chlo01200 chlo01230 chlo01100 chlo01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:chlo00030 chlo00230 chlo01200 chlo01230 chlo01100]

Other carbohydrate metabolism
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:chlo00500 chlo01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:chlo00520 chlo00052 chlo01250 chlo01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:chlo00520 chlo01250 chlo01100]

Energy metabolism
Carbon fixation
M00168 CAM (Crassulacean acid metabolism), dark [PATH:chlo00620 chlo01200 chlo01100 chlo01120]
M00169 CAM (Crassulacean acid metabolism), light [PATH:chlo00620 chlo01200 chlo01100 chlo01120]
M00579 Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:chlo00430 chlo00620 chlo01200 chlo01100 chlo01120]

Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
M00144 NADH:quinone oxidoreductase, prokaryotes [PATH:chlo00190 chlo01100]
M00155 Cytochrome c oxidase, prokaryotes [PATH:chlo00190 chlo01100]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH:chlo00190 chlo01100]

Lipid metabolism
Fatty acid metabolism
M00082 Fatty acid biosynthesis, initiation [PATH:chlo00061 chlo01212 chlo01100]
M00083 Fatty acid biosynthesis, elongation [PATH:chlo00061 chlo01212 chlo01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:chlo00061 chlo00071 chlo01212 chlo01100]
M00087 beta-Oxidation [PATH:chlo00071 chlo01212 chlo01100]

Sterol biosynthesis
Lipid metabolism
M00091 Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:chlo00564 chlo01100]
M00093 Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:chlo00564 chlo01100]

Nucleotide metabolism
Purine metabolism
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:chlo00230 chlo01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:chlo00230 chlo01232 chlo01240 chlo01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:chlo00230 chlo01232 chlo01100]
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:chlo00230 chlo00240 chlo01232 chlo01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:chlo00240 chlo01232 chlo01240 chlo01100]

Amino acid metabolism
Serine and threonine metabolism
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:chlo00260 chlo01230 chlo01100 chlo01110]
M00621 Glycine cleavage system [PATH:chlo00260 chlo00630 chlo00785 chlo01200 chlo01100]

Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine [PATH:chlo00270 chlo00920 chlo01200 chlo01230 chlo01100 chlo01110]

Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
M00015 Proline biosynthesis, glutamate => proline [PATH:chlo00330 chlo01230 chlo01100]

Polyamine biosynthesis
Histidine metabolism
M00045 Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:chlo00340 chlo01100]

Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:chlo00400 chlo01230 chlo01100 chlo01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:chlo00400 chlo01230 chlo01100 chlo01110]
M00038 Tryptophan metabolism, tryptophan => kynurenine => 2-aminomuconate [PATH:chlo00380 chlo01100]

Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
M00063 CMP-KDO biosynthesis [PATH:chlo00540 chlo01250 chlo01100]

Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:chlo00750 chlo01240 chlo01100]
M00912 NAD biosynthesis, tryptophan => quinolinate => NAD [PATH:chlo00380 chlo00760 chlo01240 chlo01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:chlo00770 chlo01240 chlo01100 chlo01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:chlo00770 chlo01240 chlo01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:chlo00785 chlo01240 chlo01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:chlo00790 chlo01240 chlo01100]
M00140 C1-unit interconversion, prokaryotes [PATH:chlo00670 chlo01240 chlo01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:chlo00860 chlo01240 chlo01100 chlo01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:chlo00860 chlo01240 chlo01100]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
M00793 dTDP-L-rhamnose biosynthesis [PATH:chlo00521 chlo00523 chlo00541 chlo01250 chlo01100 chlo01110]

Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity