KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: cif00010 cif01200 cif01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: cif00010 cif01200 cif01230 cif01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: cif00010 cif00020 cif01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: cif00010 cif00020 cif00620 cif00785 cif01200 cif01210 cif01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: cif00020 cif01200 cif01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: cif00020 cif01200 cif01210 cif01230 cif01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: cif00020 cif01200 cif01210 cif01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: cif00030 cif01200 cif01100 cif01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: cif00030 cif01200 cif01100 cif01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: cif00030 cif01200 cif01230 cif01100 cif01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: cif00030 cif00230 cif01200 cif01230 cif01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: cif00030 cif01200 cif01100 cif01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cif00040 cif00030 cif01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cif00040 cif00030 cif01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cif00052 cif01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:cif00053 cif01100 cif01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cif00500 cif01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:cif00500 cif01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cif00520 cif01250 cif01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cif00520 cif00052 cif01250 cif01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cif00520 cif01250 cif01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:cif00520 cif01100]
M00012 Glyoxylate cycle [PATH:cif00630 cif01200 cif01100 cif01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: cif00730 cif01240 cif01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: cif00730 cif01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: cif00740 cif01240 cif01100 cif01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: cif00750 cif01240 cif01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: cif00760 cif01240 cif01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: cif00770 cif01240 cif01100 cif01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: cif00770 cif01240 cif01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: cif00780 cif01240 cif01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: cif00780 cif01240 cif01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: cif00785 cif01240 cif01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: cif00790 cif00670 cif01240 cif01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: cif00790 cif01240 cif01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: cif00860 cif01240 cif01100 cif01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: cif00860 cif01240 cif01100 cif01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: cif00860 cif01240 cif01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: cif00860 cif01240 cif01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: cif00130 cif01240 cif01100 cif01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: cif00130 cif01240 cif01100 cif01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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