KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: csk00010 csk01200 csk01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: csk00010 csk01200 csk01230 csk01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: csk00010 csk00020 csk01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: csk00010 csk00020 csk00620 csk00785 csk01200 csk01210 csk01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: csk00020 csk01200 csk01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: csk00020 csk01200 csk01210 csk01230 csk01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: csk00020 csk01200 csk01210 csk01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: csk00030 csk01200 csk01100 csk01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: csk00030 csk01200 csk01100 csk01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: csk00030 csk01200 csk01230 csk01100 csk01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: csk00030 csk00230 csk01200 csk01230 csk01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: csk00030 csk01200 csk01100 csk01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:csk00040 csk00030 csk01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:csk00040 csk00030 csk01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:csk00052 csk01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:csk00052 csk01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:csk00500 csk01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:csk00500 csk01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:csk00520 csk01250 csk01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:csk00520 csk00052 csk01250 csk01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:csk00520 csk01250 csk01100]
M00012 Glyoxylate cycle [PATH:csk00630 csk01200 csk01100 csk01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: csk00730 csk01240 csk01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: csk00730 csk01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: csk00740 csk01240 csk01100 csk01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: csk00750 csk01240 csk01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: csk00760 csk01240 csk01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: csk00770 csk01240 csk01100 csk01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: csk00770 csk01240 csk01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: csk00780 csk01240 csk01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: csk00780 csk01240 csk01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: csk00785 csk01240 csk01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: csk00790 csk00670 csk01240 csk01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: csk00790 csk01240 csk01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: csk00860 csk01240 csk01100 csk01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: csk00860 csk01240 csk01100 csk01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: csk00130 csk01240 csk01100 csk01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: csk00130 csk01240 csk01100 csk01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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