KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: emo00010 emo01200 emo01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: emo00010 emo01200 emo01230 emo01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: emo00010 emo00020 emo01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: emo00010 emo00020 emo00620 emo00785 emo01200 emo01210 emo01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: emo00020 emo01200 emo01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: emo00020 emo01200 emo01210 emo01230 emo01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: emo00020 emo01200 emo01210 emo01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: emo00030 emo01200 emo01100 emo01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: emo00030 emo01200 emo01100 emo01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: emo00030 emo01200 emo01230 emo01100 emo01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: emo00030 emo00230 emo01200 emo01230 emo01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: emo00030 emo01200 emo01100 emo01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:emo00040 emo00030 emo01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:emo00040 emo00030 emo01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:emo00052 emo01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:emo00052 emo01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:emo00053 emo01100 emo01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:emo00500 emo01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:emo00500 emo01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:emo00500 emo01100 emo01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:emo00520 emo01250 emo01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:emo00520 emo00052 emo01250 emo01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:emo00520 emo01250 emo01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:emo00520 emo01100]
M00012 Glyoxylate cycle [PATH:emo00630 emo01200 emo01100 emo01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: emo00730 emo01240 emo01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: emo00730 emo01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: emo00740 emo01240 emo01100 emo01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: emo00750 emo01240 emo01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH: emo00750 emo01240 emo01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: emo00760 emo01240 emo01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: emo00770 emo01240 emo01100 emo01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: emo00770 emo01240 emo01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: emo00780 emo01240 emo01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: emo00780 emo01240 emo01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: emo00785 emo01240 emo01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: emo00790 emo00670 emo01240 emo01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: emo00790 emo01240 emo01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: emo00860 emo01240 emo01100 emo01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: emo00860 emo01240 emo01100 emo01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: emo00860 emo01240 emo01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: emo00860 emo01240 emo01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: emo00130 emo01240 emo01100 emo01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: emo00130 emo01240 emo01100 emo01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00649 Multidrug resistance, efflux pump AdeABC [PATH:emo01501]
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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