KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: eoi00010 eoi01200 eoi01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: eoi00010 eoi01200 eoi01230 eoi01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: eoi00010 eoi00020 eoi01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: eoi00010 eoi00020 eoi00620 eoi00785 eoi01200 eoi01210 eoi01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: eoi00020 eoi01200 eoi01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: eoi00020 eoi01200 eoi01210 eoi01230 eoi01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: eoi00020 eoi01200 eoi01210 eoi01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: eoi00030 eoi01200 eoi01100 eoi01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: eoi00030 eoi01200 eoi01100 eoi01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: eoi00030 eoi01200 eoi01230 eoi01100 eoi01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: eoi00030 eoi00230 eoi01200 eoi01230 eoi01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: eoi00030 eoi01200 eoi01100 eoi01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:eoi00040 eoi00030 eoi01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:eoi00040 eoi00030 eoi01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:eoi00052 eoi01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:eoi00052 eoi01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:eoi00053 eoi01100 eoi01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:eoi00500 eoi01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:eoi00500 eoi01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:eoi00520 eoi01250 eoi01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:eoi00520 eoi00052 eoi01250 eoi01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:eoi00520 eoi01250 eoi01100]
M00012 Glyoxylate cycle [PATH:eoi00630 eoi01200 eoi01100 eoi01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: eoi00730 eoi01240 eoi01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: eoi00730 eoi01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: eoi00740 eoi01240 eoi01100 eoi01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: eoi00750 eoi01240 eoi01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: eoi00760 eoi01240 eoi01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: eoi00770 eoi01240 eoi01100 eoi01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: eoi00770 eoi01240 eoi01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: eoi00780 eoi01240 eoi01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: eoi00780 eoi01240 eoi01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: eoi00785 eoi01240 eoi01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: eoi00790 eoi00670 eoi01240 eoi01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: eoi00790 eoi01240 eoi01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: eoi00860 eoi01240 eoi01100 eoi01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: eoi00860 eoi01240 eoi01100 eoi01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: eoi00130 eoi01240 eoi01100 eoi01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: eoi00130 eoi01240 eoi01100 eoi01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
M00542 EHEC/EPEC pathogenicity signature, T3SS and effectors [PATH:eoi05130]
M00363 EHEC pathogenicity signature, Shiga toxin [PATH:eoi05130]
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
M00697 Multidrug resistance, efflux pump MdtEF-TolC
M00746 Multidrug resistance, repression of porin OmpF
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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