KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: ept00010 ept01200 ept01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: ept00010 ept01200 ept01230 ept01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: ept00010 ept00020 ept01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: ept00010 ept00020 ept00620 ept00785 ept01200 ept01210 ept01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: ept00020 ept01200 ept01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: ept00020 ept01200 ept01210 ept01230 ept01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: ept00020 ept01200 ept01210 ept01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: ept00030 ept01200 ept01100 ept01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: ept00030 ept01200 ept01100 ept01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: ept00030 ept01200 ept01230 ept01100 ept01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: ept00030 ept00230 ept01200 ept01230 ept01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: ept00030 ept01200 ept01100 ept01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ept00040 ept00030 ept01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ept00040 ept00030 ept01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ept00052 ept01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:ept00052 ept01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:ept00053 ept01100 ept01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ept00500 ept01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:ept00500 ept01100]
M00565 Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:ept00500 ept01100 ept01110]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ept00520 ept01250 ept01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ept00520 ept00052 ept01250 ept01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ept00520 ept01250 ept01100]
M00012 Glyoxylate cycle [PATH:ept00630 ept01200 ept01100 ept01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: ept00730 ept01240 ept01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: ept00730 ept01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: ept00740 ept01240 ept01100 ept01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: ept00750 ept01240 ept01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: ept00760 ept01240 ept01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: ept00770 ept01240 ept01100 ept01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: ept00770 ept01240 ept01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: ept00780 ept01240 ept01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: ept00780 ept01240 ept01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: ept00785 ept01240 ept01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: ept00790 ept00670 ept01240 ept01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: ept00790 ept01240 ept01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: ept00860 ept01240 ept01100 ept01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: ept00860 ept01240 ept01100 ept01110]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: ept00130 ept01240 ept01100 ept01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: ept00130 ept01240 ept01100 ept01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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