KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: esc00010 esc01200 esc01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: esc00010 esc01200 esc01230 esc01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: esc00010 esc00020 esc01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: esc00010 esc00020 esc00620 esc00785 esc01200 esc01210 esc01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: esc00020 esc01200 esc01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: esc00020 esc01200 esc01210 esc01230 esc01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: esc00020 esc01200 esc01210 esc01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: esc00030 esc01200 esc01100 esc01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: esc00030 esc01200 esc01100 esc01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: esc00030 esc01200 esc01230 esc01100 esc01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: esc00030 esc00230 esc01200 esc01230 esc01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: esc00030 esc01200 esc01100 esc01120]
Other carbohydrate metabolism
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:esc00040 esc00030 esc01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:esc00040 esc00030 esc01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:esc00052 esc01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:esc00052 esc01100]
M00550 Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:esc00053 esc01100 esc01120]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:esc00500 esc01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH:esc00500 esc01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:esc00520 esc01250 esc01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:esc00520 esc00052 esc01250 esc01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:esc00520 esc01250 esc01100]
M00761 Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:esc00520 esc01100]
M00012 Glyoxylate cycle [PATH:esc00630 esc01200 esc01100 esc01110]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: esc00730 esc01240 esc01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH: esc00730 esc01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: esc00740 esc01240 esc01100 esc01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: esc00750 esc01240 esc01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: esc00760 esc01240 esc01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH: esc00770 esc01240 esc01100 esc01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: esc00770 esc01240 esc01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH: esc00780 esc01240 esc01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: esc00780 esc01240 esc01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: esc00785 esc01240 esc01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: esc00790 esc00670 esc01240 esc01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: esc00790 esc01240 esc01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH: esc00860 esc01240 esc01100 esc01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: esc00860 esc01240 esc01100 esc01110]
M00924 Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH: esc00860 esc01240 esc01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: esc00860 esc01240 esc01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: esc00130 esc01240 esc01100 esc01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: esc00130 esc01240 esc01100 esc01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00696 Multidrug resistance, efflux pump AcrEF-TolC
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00616 Sulfate-sulfur assimilation
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