KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH: hal00010 hal01200 hal01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH: hal00010 hal01200 hal01230 hal01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH: hal00010 hal00020 hal01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH: hal00010 hal00020 hal00620 hal00785 hal01200 hal01210 hal01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH: hal00020 hal01200 hal01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH: hal00020 hal01200 hal01210 hal01230 hal01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH: hal00020 hal01200 hal01210 hal01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH: hal00030 hal01200 hal01100 hal01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH: hal00030 hal01200 hal01100 hal01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH: hal00030 hal01200 hal01230 hal01100 hal01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH: hal00030 hal00230 hal01200 hal01230 hal01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH: hal00030 hal01200 hal01100 hal01120]
M00308 Semi-phosphorylative Entner-Doudoroff pathway, gluconate => glycerate-3P [PATH: hal00030 hal01200 hal01100 hal01120]
Other carbohydrate metabolism
M00014 Glucuronate pathway (uronate pathway) [PATH: hal01100]
M00631 D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH: hal00030 hal01100]
M00061 D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH: hal00030 hal01100]
M00632 Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH: hal00052 hal01100]
M00552 D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH: hal00052 hal01100]
M00854 Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH: hal00500 hal01100]
M00855 Glycogen degradation, glycogen => glucose-6P [PATH: hal00500 hal01100]
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH: hal00520 hal01250 hal01100]
M00554 Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH: hal00520 hal00052 hal01250 hal01100]
M00892 UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH: hal00520 hal01250 hal01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH: hal00520 hal01250 hal01100]
M00012 Glyoxylate cycle [PATH: hal00630 hal01200 hal01100 hal01110]
M00740 Methylaspartate cycle [PATH: hal00020 hal00250 hal00630 hal01200 hal01100 hal01120]
M00741 Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH: hal00280 hal00630 hal00640 hal01200 hal01100]
M00968 Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH: hal00030 hal00230 hal00240 hal00630 hal01100]
M00130 Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4 [PATH: hal00562 hal01100]
M00132 Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH: hal00562 hal01100]
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
M00862 beta-Oxidation, peroxisome, tri/dihydroxycholestanoyl-CoA => choloyl/chenodeoxycholoyl-CoA [PATH:hal01100]
M00110 C19/C18-Steroid hormone biosynthesis, pregnenolone => androstenedione => estrone [PATH:hal01100]
M00976 C19-Steroid hormone biosynthesis, pregnenolone => testosterone => dihydrotestosterone [PATH:hal01100]
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
M00070 Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer [PATH:hal01100]
M00071 Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer [PATH:hal01100]
M00068 Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer [PATH:hal01100]
M00069 Glycosphingolipid biosynthesis, ganglio series, LacCer => GT3 [PATH:hal01100]
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00896 Thiamine biosynthesis, archaea, AIR (+ NAD+) => TMP/TPP [PATH:hal00730 hal01240 hal01100]
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:hal00730 hal01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:hal00740 hal01240 hal01100 hal01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:hal00750 hal01240 hal01100]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:hal00750 hal01240 hal01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:hal00760 hal01240 hal01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:hal00770 hal01240 hal01100 hal01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:hal00770 hal01240 hal01100]
M00914 Coenzyme A biosynthesis, archaea, 2-oxoisovalerate => 4-phosphopantoate => CoA [PATH:hal00770 hal01240 hal01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:hal00780 hal01240 hal01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:hal00780 hal01240 hal01100]
M00950 Biotin biosynthesis, BioU pathway, pimeloyl-ACP/CoA => biotin [PATH:hal00780 hal01240 hal01100]
M00577 Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:hal00780 hal01240 hal01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:hal00785 hal01240 hal01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:hal00790 hal00670 hal01240 hal01100]
M00842 Tetrahydrobiopterin biosynthesis, GTP => BH4 [PATH:hal00790 hal01240 hal01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:hal00790 hal01240 hal01100]
M00140 C1-unit interconversion, prokaryotes [PATH:hal00670 hal01240 hal01100]
M00141 C1-unit interconversion, eukaryotes [PATH:hal00670 hal01240 hal01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:hal00860 hal01240 hal01100 hal01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:hal00860 hal01240 hal01100 hal01110]
M00847 Heme biosynthesis, archaea, siroheme => heme [PATH:hal00860 hal01240 hal01100 hal01110]
M00925 Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:hal00860 hal01240 hal01100]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:hal00860 hal01240 hal01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:hal00130 hal01240 hal01100 hal01110]
M00128 Ubiquinone biosynthesis, eukaryotes, 4-hydroxybenzoate + polyprenyl-PP => ubiquinol [PATH:hal00130 hal01240 hal01100]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
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